RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SDHCQ99643 169 aaPredicted RBP3.71□□□□□ -1.82
HERC1-208ENST00000560462 C20orf85Q9H1P6 137 aa3.71□□□□□ -1.82
HERC1-208ENST00000560462 NPVFQ9HCQ7 196 aa3.71□□□□□ -1.82
HERC1-208ENST00000560462 DHRS4-AS1Q9P1J3 65 aa3.71□□□□□ -1.82
HERC1-208ENST00000560462 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 IFITM10A6NMD0 228 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 CENPXA8MT69 81 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 FNDC10F2Z333 226 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 K7EPK0 472 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 HYPMO75409 117 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 CXCL3P19876 107 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 ZNF138P52744 262 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 ELOBQ15370 118 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 LCN15Q6UWW0 184 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 S100A7AQ86SG5 101 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 ZNF546Q86UE3 836 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 OR10P1Q8NGE3 313 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 SMIM8Q96KF7 97 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 ARL6Q9H0F7 186 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 ARV1Q9H2C2 271 aa3.7□□□□□ -1.82
HERC1-208ENST00000560462 C7orf66A4D0T2 115 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 H7C423 109 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 SLC17A3O00476 420 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 AGPAT2O15120 278 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 LYRM1O43325 122 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 COX7A2P2O60397 106 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 ZNF253O75346 499 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 MT-ND6P03923 174 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 CXCL2P19875 107 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 TAS2R30P59541 319 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 ZC2HC1BQ5TFG8 222 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 PATE2Q6UY27 113 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 LINC00305Q7Z4B0 112 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 LRRC20Q8TCA0 184 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 CHCHD10Q8WYQ3 142 aaPredicted RBP3.69□□□□□ -1.82
HERC1-208ENST00000560462 RPUSD4Q96CM3 377 aaKnown RBP3.69□□□□□ -1.82
HERC1-208ENST00000560462 MGST2Q99735 147 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 SLC50A1Q9BRV3 221 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 ZNF331Q9NQX6 463 aaPredicted RBP3.69□□□□□ -1.82
HERC1-208ENST00000560462 GSKIPQ9P0R6 139 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 Q9UF83 564 aa3.69□□□□□ -1.82
HERC1-208ENST00000560462 LSM5Q9Y4Y9 91 aaKnown RBP3.69□□□□□ -1.82
HERC1-208ENST00000560462 TRAV6A0A075B6T7 132 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 UBE2L5PA0A1B0GUS4 154 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 PGPA6NDG6 321 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 HSBP1L1C9JCN9 74 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 NDUFS6O75380 124 aaKnown RBP3.68□□□□□ -1.82
HERC1-208ENST00000560462 CAV2P51636 162 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 SS18Q15532 418 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 GUK1Q16774 197 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 BPIFA4PQ86YQ2 179 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 ZNF431Q8TF32 576 aaPredicted RBP3.68□□□□□ -1.82
HERC1-208ENST00000560462 SEC22CQ9BRL7 303 aa3.68□□□□□ -1.82
HERC1-208ENST00000560462 A0A087WX48 190 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 TRAV4A0A0B4J268 109 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 PLA2G10O15496 165 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 CST7O76096 145 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 IGLC2P0DOY2 106 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 S100A10P60903 97 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 BAXQ07812 192 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 KRTAP19-6Q3LI70 58 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 C1orf137Q5JT78 98 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 C10orf113Q5VZT2 155 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 MIC13Q5XKP0 118 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 KRTAP5-3Q6L8H2 238 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 Q6ZN92 141 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 SUN5Q8TC36 379 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 PFDN5Q99471 154 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 PRADC1Q9BSG0 188 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 GGACTQ9BVM4 153 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 ACTR3CQ9C0K3 210 aaPredicted RBP3.67□□□□□ -1.82
HERC1-208ENST00000560462 C11orf1Q9H5F2 150 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 UQCC1Q9NVA1 299 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 TP53TG3Q9ULZ0 132 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 CARHSP1Q9Y2V2 147 aaKnown RBP3.67□□□□□ -1.82
HERC1-208ENST00000560462 PXMP4Q9Y6I8 212 aa3.67□□□□□ -1.82
HERC1-208ENST00000560462 FLGP20930 4061 aaPredicted RBP3.66□□□□□ -1.82
HERC1-208ENST00000560462 A0A087WWC5 75 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 IGSF23A1L1A6 192 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 FAM24AA6NFZ4 105 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 H3BQ15 152 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 PPP1R2P9O14990 202 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 EIF3GO75821 320 aaKnown RBP eCLIP3.66□□□□□ -1.82
HERC1-208ENST00000560462 CRPP02741 224 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 PVALBP20472 110 aaPredicted RBP3.66□□□□□ -1.82
HERC1-208ENST00000560462 SULT1A1P50225 295 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 CXCL6P80162 114 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 ENHOQ6UWT2 76 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 STX12Q86Y82 276 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 C12orf45Q8N5I9 185 aaPredicted RBP3.66□□□□□ -1.82
HERC1-208ENST00000560462 SLC25A29Q8N8R3 303 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 RASL10AQ92737 203 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 CCDC32Q9BV29 185 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 LYRM2Q9NU23 88 aaPredicted RBP3.66□□□□□ -1.82
HERC1-208ENST00000560462 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
HERC1-208ENST00000560462 IGLV8-61A0A075B6I0 122 aa3.65□□□□□ -1.83
HERC1-208ENST00000560462 C7orf71A4D174 169 aa3.65□□□□□ -1.83
HERC1-208ENST00000560462 M0R3E3 92 aa3.65□□□□□ -1.83
HERC1-208ENST00000560462 SNAPINO95295 136 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms