RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 OR11H12B2RN74 326 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 SIVA1O15304 175 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 GNRH2O43555 120 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 IGKCP01834 107 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 CD7P09564 240 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 RNASE3P12724 160 aaKnown RBP5.64□□□□□ -1.51
LRRC28-211ENST00000558890 ODF1Q14990 250 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 MPV17L2Q567V2 206 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 TMEM97Q5BJF2 176 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 BVES-AS1Q5T3Y7 98 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 C19orf73Q9NVV2 129 aa5.64□□□□□ -1.51
LRRC28-211ENST00000558890 IGHV1OR15-1A0A075B7D0 117 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.63□□□□□ -1.51
LRRC28-211ENST00000558890 HLA-DRB4P13762 266 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 PLNP26678 52 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 CDKN1BP46527 198 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 NMUP48645 174 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 RPL32P62910 135 aaKnown RBP5.63□□□□□ -1.51
LRRC28-211ENST00000558890 SEC11AP67812 179 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 HSD52Q0P140 79 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 KIR3DS1Q14943 382 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 ODF3L2Q3SX64 289 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 BOD1L2Q8IYS8 172 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 POM121L12Q8N7R1 296 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 KIR2DL5BQ8NHK3 375 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 RASL10AQ92737 203 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 MAP6D1Q9H9H5 199 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 DKK2Q9UBU2 259 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 TP73-AS1Q9UF72 201 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 COX11Q9Y6N1 276 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 HLA-DRB4X5D2U9 266 aa5.63□□□□□ -1.51
LRRC28-211ENST00000558890 A0A087WX48 190 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 TRAV12-1A0A0B4J245 112 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 IGHV3-16A0A0C4DH30 117 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 A6NDN8 102 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 IGKV3-20P01619 116 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 FGF6P10767 208 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 MORN3Q6PF18 240 aaPredicted RBP5.62□□□□□ -1.51
LRRC28-211ENST00000558890 C2orf91Q6ZV80 131 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 Q8N1Y9 231 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 RPL39LQ96EH5 51 aaKnown RBP5.62□□□□□ -1.51
LRRC28-211ENST00000558890 C9orf85Q96MD7 179 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 SCGB3A1Q96QR1 104 aa5.62□□□□□ -1.51
LRRC28-211ENST00000558890 F5H697 171 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 F8VRH5 84 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 H7C1H1 209 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 SPRY2O43597 315 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 VAMP3Q15836 100 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 SPINK13Q1W4C9 94 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 SUMO4Q6EEV6 95 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 TOMM6Q96B49 74 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 C1QTNF4Q9BXJ3 329 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 CSTL1Q9H114 145 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 ZMAT4Q9H898 229 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 CYSLTR1Q9Y271 337 aa5.61□□□□□ -1.51
LRRC28-211ENST00000558890 TRAV12-2A0A075B6T6 113 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 CBY3A6NI87 242 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 H3BMM0 161 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 VCYO14598 125 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 NPSP0C0P6 89 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
LRRC28-211ENST00000558890 DEFB131AP59861 70 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 ZNF56Q15929 161 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 ZC2HC1BQ5TFG8 222 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 C2orf66Q6UXQ4 117 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 TRPT1Q86TN4 253 aaKnown RBP5.6□□□□□ -1.51
LRRC28-211ENST00000558890 KIR2DL4Q99706 377 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 MRPL35Q9NZE8 188 aaKnown RBP5.6□□□□□ -1.51
LRRC28-211ENST00000558890 CHTOPQ9Y3Y2 248 aaKnown RBP5.6□□□□□ -1.51
LRRC28-211ENST00000558890 KIF25-AS1Q9Y6Z4 181 aa5.6□□□□□ -1.51
LRRC28-211ENST00000558890 A0A087WWL8 130 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 TRBV6-5A0A0K0K1A5 114 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 KNCNA6PVL3 124 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 PTTG1IPP53801 180 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 APOC4P55056 127 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 TCTAP57738 103 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 UBE2V1Q13404 147 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 FAM74A4Q5TZK3 123 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 PCP2Q8IVA1 136 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 STHQ8IWL8 128 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 HIGD1BQ9P298 99 aa5.59□□□□□ -1.51
LRRC28-211ENST00000558890 DYNC2H1Q8NCM8 4307 aaKnown RBP5.58□□□□□ -1.52
LRRC28-211ENST00000558890 TAX1BP3O14907 124 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 LINC00315P59091 139 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 HERVK_113P61574 105 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 ZNF415Q09FC8 603 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 RHOHQ15669 191 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 ZNF124Q15973 351 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 PAPPA-AS1Q5QFB9 102 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 AMTNQ6UX39 209 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 ERASQ7Z444 233 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 NEXN-AS1Q8NBZ9 246 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 OR11H2Q8NH07 326 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 BAALCQ8WXS3 180 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 TMEM141Q96I45 108 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 CHAC1Q9BUX1 264 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 TP53TG1Q9Y2A0 90 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 CSMD3Q7Z407 3707 aa5.58□□□□□ -1.52
LRRC28-211ENST00000558890 SDHAF1A6NFY7 115 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms