RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 SCGB3A1Q96QR1 104 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 UPK3BQ9BT76 320 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 SMAD5-AS1Q9Y6J3 95 aa2.35□□□□□ -2.03
HERC1-203ENST00000558532 DNAJC13O75165 2243 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 A0A0J9YXY3 114 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 A0A1B0GVY2 172 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 LY6LH3BQJ8 138 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 H3BVH4 76 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 ATOX1O00244 68 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 TIMM17BO60830 172 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 IGHV1-46P01743 117 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 ORM1P02763 201 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 IGHV1-8P0DP01 117 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 CCL3L1P16619 93 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 ZNF22P17026 224 aaPredicted RBP2.34□□□□□ -2.03
HERC1-203ENST00000558532 LOXP28300 417 aaPredicted RBP2.34□□□□□ -2.03
HERC1-203ENST00000558532 POLR2KP53803 58 aaKnown RBP2.34□□□□□ -2.03
HERC1-203ENST00000558532 LINC00315P59091 139 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 LMO4P61968 165 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 NSUN5P1Q3KNT7 163 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 C2orf82Q6UX34 121 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 Q6ZRP5 223 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 GPHB5Q86YW7 130 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 C14orf178Q8N769 122 aaPredicted RBP2.34□□□□□ -2.03
HERC1-203ENST00000558532 KLHL30-AS1Q8NEE0 82 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 NUP37Q8NFH4 326 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 NPBQ8NG41 125 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 KIR2DL5BQ8NHK3 375 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 CCL13Q99616 98 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 CHCHD5Q9BSY4 110 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 DPH3P1Q9H4G8 78 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 ICOSQ9Y6W8 199 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 KIF25-AS1Q9Y6Z4 181 aa2.34□□□□□ -2.03
HERC1-203ENST00000558532 SVILO95425 2214 aa2.34□□□□□ -2.04
HERC1-203ENST00000558532 GON4LQ3T8J9 2241 aa2.34□□□□□ -2.04
HERC1-203ENST00000558532 UNC80Q8N2C7 3258 aa2.34□□□□□ -2.04
HERC1-203ENST00000558532 IGLV7-46A0A075B6I9 117 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 IGHV3-21A0A0B4J1V1 117 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 TRAV26-2A0A0B4J265 109 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 TRBV27A0A0K0K1C4 114 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 LOC107984640A0A0U1RRK4 108 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 KRTAP9-6A8MVA2 160 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 OOSP1A8MZH6 123 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 NDUFC2-KCTD14E9PQ53 114 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 SCGB2A1O75556 95 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 CNTFRP26992 372 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 RNASE4P34096 147 aaKnown RBP2.33□□□□□ -2.04
HERC1-203ENST00000558532 UCNP55089 124 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 RHOHQ15669 191 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 ZNF56Q15929 161 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 Q5XG85 94 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 CEMP1Q6PRD7 247 aaPredicted RBP2.33□□□□□ -2.04
HERC1-203ENST00000558532 SFTA2Q6UW10 78 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 ASCL5Q7RTU5 278 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 TMEM61Q8N0U2 210 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 SMCR5Q8TEV8 140 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 FAM19A4Q96LR4 140 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 EDA2RQ9HAV5 297 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 DNAH14Q0VDD8 3507 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 PLXNB1O43157 2135 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 MALRD1Q5VYJ5 2156 aa2.33□□□□□ -2.04
HERC1-203ENST00000558532 CLPSL1A2RUU4 121 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 F5H768 121 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 BUB1B-PAK6H3BSN5 160 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 TGFAP01135 160 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 OXTP01178 125 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 TRACP01848 142 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 CTSGP08311 255 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 LGALS3P17931 250 aaKnown RBP2.32□□□□□ -2.04
HERC1-203ENST00000558532 MIAQ16674 131 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 SPANXN1Q5VSR9 72 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 Q6JHZ5 121 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 IGFL2Q6UWQ7 119 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 MUSTN1Q8IVN3 82 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 Q8N6K4 173 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 ZFAND2AQ8N6M9 145 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 ITLN2Q8WWU7 325 aaPredicted RBP2.32□□□□□ -2.04
HERC1-203ENST00000558532 RPL39LQ96EH5 51 aaKnown RBP2.32□□□□□ -2.04
HERC1-203ENST00000558532 DPH3Q96FX2 82 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 TIMM21Q9BVV7 248 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 DYNLRB1Q9NP97 96 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 LINC00527Q9UJ94 153 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 TP53TG1Q9Y2A0 90 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 C22orf24Q9Y442 160 aa2.32□□□□□ -2.04
HERC1-203ENST00000558532 INTS1Q8N201 2190 aaKnown RBP2.32□□□□□ -2.04
HERC1-203ENST00000558532 IGHV3OR16-10A0A075B7F0 116 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 TRBV7-1A0A0A6YYK4 115 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 TRAV21A0A0B4J279 112 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 F8WDY8 70 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 SOCS3O14543 225 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 COX7A2LO14548 114 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 NDUFB3O43676 98 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 COX6CP09669 75 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 INAFM2P0DMQ5 153 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 RNASE3P12724 160 aaKnown RBP2.31□□□□□ -2.04
HERC1-203ENST00000558532 PSMB8P28062 276 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 UBE2E1P51965 193 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 EMP1P54849 157 aa2.31□□□□□ -2.04
HERC1-203ENST00000558532 DSCR10P59022 87 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms