RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 CCL20P78556 96 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 MEF2BQ02080 365 aaPredicted RBP6.75□□□□□ -1.33
USP3-207ENST00000558218 SPANXN1Q5VSR9 72 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 PRR27Q6MZM9 219 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 RMI2Q96E14 147 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 DAZAP1Q96EP5 407 aaKnown RBP6.75□□□□□ -1.33
USP3-207ENST00000558218 Q9UF83 564 aa6.75□□□□□ -1.33
USP3-207ENST00000558218 XKRY2A2RUG3 117 aa6.74□□□□□ -1.33
USP3-207ENST00000558218 PKIAP61925 76 aa6.74□□□□□ -1.33
USP3-207ENST00000558218 TMEM97Q5BJF2 176 aa6.74□□□□□ -1.33
USP3-207ENST00000558218 Q6ZNX1 250 aa6.74□□□□□ -1.33
USP3-207ENST00000558218 NIT1Q86X76 327 aa6.74□□□□□ -1.33
USP3-207ENST00000558218 Q8N814 137 aa6.74□□□□□ -1.33
USP3-207ENST00000558218 OR10AG1Q8NH19 301 aa6.74□□□□□ -1.33
USP3-207ENST00000558218 IGLV5-52A0A0A0MRZ9 124 aa6.73□□□□□ -1.33
USP3-207ENST00000558218 F2Z2F3 143 aa6.73□□□□□ -1.33
USP3-207ENST00000558218 SMIM17P0DL12 118 aa6.73□□□□□ -1.33
USP3-207ENST00000558218 XGP55808 180 aa6.73□□□□□ -1.33
USP3-207ENST00000558218 RPL19P84098 196 aaKnown RBP6.73□□□□□ -1.33
USP3-207ENST00000558218 KCNIP4Q6PIL6 250 aa6.73□□□□□ -1.33
USP3-207ENST00000558218 TMEM70Q9BUB7 260 aa6.73□□□□□ -1.33
USP3-207ENST00000558218 Q9HAA7 133 aa6.73□□□□□ -1.33
USP3-207ENST00000558218 VAX2Q9UIW0 290 aa6.73□□□□□ -1.33
USP3-207ENST00000558218 A0A087WX48 190 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 TRBV6-8A0A0A6YYG3 113 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 C19orf71A6NCJ1 209 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 IGLV2-8P01709 118 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 BCL2P10415 239 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 GNG4P50150 75 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 KRTAP10-1P60331 282 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 CACNG7P62955 275 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 Q0VG73 95 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 CENPWQ5EE01 88 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 WDR73Q6P4I2 378 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
USP3-207ENST00000558218 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
USP3-207ENST00000558218 MED9Q9NWA0 146 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 KIF25-AS1Q9Y6Z4 181 aa6.72□□□□□ -1.33
USP3-207ENST00000558218 RBFOX3A6NFN3 312 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 EPM2AB3EWF7 344 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 F5H697 171 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 IGLC6P0CF74 106 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 ZNF56Q15929 161 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 ATRAIDQ6UW56 229 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 Q8N976 141 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 FER1L6-AS1Q8NA97 138 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 NEXN-AS1Q8NBZ9 246 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 OR2D3Q8NGH3 330 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 DNAJC30Q96LL9 226 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 AP1S3Q96PC3 154 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 DERL1Q9BUN8 251 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
USP3-207ENST00000558218 LRP1BQ9NZR2 4599 aa6.7□□□□□ -1.34
USP3-207ENST00000558218 RAB19A4D1S5 217 aa6.7□□□□□ -1.34
USP3-207ENST00000558218 H7C1H1 209 aa6.7□□□□□ -1.34
USP3-207ENST00000558218 P01737 135 aa6.7□□□□□ -1.34
USP3-207ENST00000558218 BLOC1S1P78537 153 aa6.7□□□□□ -1.34
USP3-207ENST00000558218 AKAP14Q86UN6 197 aa6.7□□□□□ -1.34
USP3-207ENST00000558218 C9orf62Q8N4C0 152 aa6.7□□□□□ -1.34
USP3-207ENST00000558218 KLK12Q9UKR0 248 aa6.7□□□□□ -1.34
USP3-207ENST00000558218 TMEM262E9PQX1 116 aa6.69□□□□□ -1.34
USP3-207ENST00000558218 NDUFS6O75380 124 aaKnown RBP6.69□□□□□ -1.34
USP3-207ENST00000558218 FUSP35637 526 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP3-207ENST00000558218 FRZBQ92765 325 aa6.69□□□□□ -1.34
USP3-207ENST00000558218 HSPG2P98160 4391 aa6.69□□□□□ -1.34
USP3-207ENST00000558218 TRBV20OR9-2A0A075B6H5 130 aa6.68□□□□□ -1.34
USP3-207ENST00000558218 TMEM250H0YL14 139 aa6.68□□□□□ -1.34
USP3-207ENST00000558218 M0QY20 66 aa6.68□□□□□ -1.34
USP3-207ENST00000558218 TRGC1P0CF51 173 aa6.68□□□□□ -1.34
USP3-207ENST00000558218 NUDT10Q8NFP7 164 aa6.68□□□□□ -1.34
USP3-207ENST00000558218 LYPD6BQ8NI32 183 aa6.68□□□□□ -1.34
USP3-207ENST00000558218 NUDT11Q96G61 164 aa6.68□□□□□ -1.34
USP3-207ENST00000558218 CNFNQ9BYD5 112 aa6.68□□□□□ -1.34
USP3-207ENST00000558218 IGKV2D-24A0A075B6R9 120 aa6.67□□□□□ -1.34
USP3-207ENST00000558218 MUC21A0A0G2JKD1 596 aa6.67□□□□□ -1.34
USP3-207ENST00000558218 MUC21A0A140T8X8 626 aa6.67□□□□□ -1.34
USP3-207ENST00000558218 NTF3P20783 257 aa6.67□□□□□ -1.34
USP3-207ENST00000558218 C14orf177Q52M58 125 aa6.67□□□□□ -1.34
USP3-207ENST00000558218 LCE5AQ5TCM9 118 aa6.67□□□□□ -1.34
USP3-207ENST00000558218 UBE2WQ96B02 151 aa6.67□□□□□ -1.34
USP3-207ENST00000558218 TRBV25-1A0A075B6N4 114 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 GZMBP10144 247 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 SSTP61278 116 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 MIAQ16674 131 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 IQCJQ1A5X6 159 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 RASL11AQ6T310 242 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 LYZL1Q6UWQ5 148 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 ENHOQ6UWT2 76 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 NTM-AS1Q6ZSK4 140 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 OCC1Q8TAD7 63 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 BAALCQ8WXS3 180 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 CHCHD5Q9BSY4 110 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 TPPP3Q9BW30 176 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 DPH3P1Q9H4G8 78 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 NIT2Q9NQR4 276 aa6.66□□□□□ -1.34
USP3-207ENST00000558218 IGHV1-24A0A0C4DH33 117 aa6.65□□□□□ -1.34
USP3-207ENST00000558218 A0A1B0GUV1 79 aa6.65□□□□□ -1.34
USP3-207ENST00000558218 CRPP02741 224 aa6.65□□□□□ -1.34
USP3-207ENST00000558218 CTRLP40313 264 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms