RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 GAGE12IP0CL82 117 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 PKIAP61925 76 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 SUMO4Q6EEV6 95 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 Q8N8P6 123 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 PRSS3P2Q8NHM4 247 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 TMEM18Q96B42 140 aa7.48□□□□□ -1.21
GABRB3-213ENST00000557765 MUC4Q99102 2169 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 NOTCH1P46531 2555 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 A0A087WWL8 130 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 POLR2KP53803 58 aaKnown RBP7.47□□□□□ -1.21
GABRB3-213ENST00000557765 FA2HQ7L5A8 372 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 NRACQ8N912 160 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 C11orf45Q8TAV5 145 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 SMIM2Q9BVW6 85 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 GTSF1LQ9H1H1 148 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 HHLA3Q9XRX5 114 aa7.47□□□□□ -1.21
GABRB3-213ENST00000557765 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.22
GABRB3-213ENST00000557765 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.22
GABRB3-213ENST00000557765 H7C423 109 aa7.46□□□□□ -1.22
GABRB3-213ENST00000557765 I3L3M4 83 aa7.46□□□□□ -1.22
GABRB3-213ENST00000557765 HSBP1O75506 76 aa7.46□□□□□ -1.22
GABRB3-213ENST00000557765 TCTAP57738 103 aa7.46□□□□□ -1.22
GABRB3-213ENST00000557765 TIRAPP58753 221 aa7.46□□□□□ -1.22
GABRB3-213ENST00000557765 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 C5orf52A6NGY3 159 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 DEFB130BP0DP73 79 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 DEFB130AP0DP74 79 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 S100A2P29034 98 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 EMP1P54849 157 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 FHL2Q14192 279 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 PAPPA-AS1Q5QFB9 102 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 SLC25A29Q8N8R3 303 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 ZNF479Q96JC4 524 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 TMEM70Q9BUB7 260 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 SAMD10Q9BYL1 202 aa7.45□□□□□ -1.22
GABRB3-213ENST00000557765 TRAV10A0A0B4J240 114 aa7.44□□□□□ -1.22
GABRB3-213ENST00000557765 NPYP01303 97 aa7.44□□□□□ -1.22
GABRB3-213ENST00000557765 HOXA5P20719 270 aa7.44□□□□□ -1.22
GABRB3-213ENST00000557765 CRYBA4P53673 196 aa7.44□□□□□ -1.22
GABRB3-213ENST00000557765 SSTP61278 116 aa7.44□□□□□ -1.22
GABRB3-213ENST00000557765 LAGE3Q14657 143 aa7.44□□□□□ -1.22
GABRB3-213ENST00000557765 MRPL23Q16540 153 aaKnown RBP7.44□□□□□ -1.22
GABRB3-213ENST00000557765 KIAA1644Q3SXP7 199 aa7.44□□□□□ -1.22
GABRB3-213ENST00000557765 C15orf53Q8NAA6 179 aa7.44□□□□□ -1.22
GABRB3-213ENST00000557765 NDUFA6P56556 154 aa7.43□□□□□ -1.22
GABRB3-213ENST00000557765 COTL1Q14019 142 aa7.43□□□□□ -1.22
GABRB3-213ENST00000557765 NIT1Q86X76 327 aa7.43□□□□□ -1.22
GABRB3-213ENST00000557765 JPT2Q9H910 190 aa7.43□□□□□ -1.22
GABRB3-213ENST00000557765 HSPB8Q9UJY1 196 aa7.43□□□□□ -1.22
GABRB3-213ENST00000557765 IGLV2-18A0A075B6J9 118 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 A0A0J9YWU9 116 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 PAX4O43316 350 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 HBDP02042 147 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 PRM2P04554 102 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 FCER1GP30273 86 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 UBE2D3P61077 147 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 UBE2D2P62837 147 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 DEFA6Q01524 100 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 C12orf74Q32Q52 190 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 NEXN-AS1Q8NBZ9 246 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 CSDC2Q9Y534 153 aaKnown RBP7.42□□□□□ -1.22
GABRB3-213ENST00000557765 ICOSQ9Y6W8 199 aa7.42□□□□□ -1.22
GABRB3-213ENST00000557765 TRAV26-2A0A0B4J265 109 aa7.41□□□□□ -1.22
GABRB3-213ENST00000557765 SERF1AO75920 110 aa7.41□□□□□ -1.22
GABRB3-213ENST00000557765 ATP5LO75964 103 aa7.41□□□□□ -1.22
GABRB3-213ENST00000557765 LINC00694P0DN24 101 aa7.41□□□□□ -1.22
GABRB3-213ENST00000557765 IFI27P40305 119 aaPredicted RBP7.41□□□□□ -1.22
GABRB3-213ENST00000557765 TIMM21Q9BVV7 248 aa7.41□□□□□ -1.22
GABRB3-213ENST00000557765 K7EP13 123 aa7.4□□□□□ -1.22
GABRB3-213ENST00000557765 ZNF25P17030 456 aaPredicted RBP7.4□□□□□ -1.22
GABRB3-213ENST00000557765 BTF3P20290 206 aaKnown RBP7.4□□□□□ -1.22
GABRB3-213ENST00000557765 RNASEKQ6P5S7 137 aaKnown RBP7.4□□□□□ -1.22
GABRB3-213ENST00000557765 CHCHD7Q9BUK0 85 aa7.4□□□□□ -1.22
GABRB3-213ENST00000557765 CYSLTR1Q9Y271 337 aa7.4□□□□□ -1.22
GABRB3-213ENST00000557765 PYGO1Q9Y3Y4 419 aa7.4□□□□□ -1.22
GABRB3-213ENST00000557765 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 F5H768 121 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 PRB2P02812 416 aaPredicted RBP7.39□□□□□ -1.23
GABRB3-213ENST00000557765 AMTP48728 403 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 SNRPEP62304 92 aaKnown RBP7.39□□□□□ -1.23
GABRB3-213ENST00000557765 IQCJQ1A5X6 159 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 LCE2DQ5TA82 110 aaPredicted RBP7.39□□□□□ -1.23
GABRB3-213ENST00000557765 NEGR1Q7Z3B1 354 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 SPATA12Q7Z6I5 190 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 HIST3H2BBQ8N257 126 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 ATP6V0E2Q8NHE4 81 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 ZNRF2Q8NHG8 242 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 RPL39LQ96EH5 51 aaKnown RBP7.39□□□□□ -1.23
GABRB3-213ENST00000557765 TMEM141Q96I45 108 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 TIMM17AQ99595 171 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 SPANXA1Q9NS26 97 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 CELA1Q9UNI1 258 aa7.39□□□□□ -1.23
GABRB3-213ENST00000557765 DEFB131BA0A096LNP1 70 aa7.38□□□□□ -1.23
GABRB3-213ENST00000557765 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
GABRB3-213ENST00000557765 NUPR2A6NF83 97 aa7.38□□□□□ -1.23
GABRB3-213ENST00000557765 SMKR1H3BMG3 65 aa7.38□□□□□ -1.23
GABRB3-213ENST00000557765 LEPROTL1O95214 131 aa7.38□□□□□ -1.23
GABRB3-213ENST00000557765 NUDT3O95989 172 aa7.38□□□□□ -1.23
GABRB3-213ENST00000557765 GYPEP15421 78 aa7.38□□□□□ -1.23
GABRB3-213ENST00000557765 ERASQ7Z444 233 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms