RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 RPL39LQ96EH5 51 aaKnown RBP16.85■□□□□ 0.29
SIX4-203ENST00000556952 SERF1AO75920 110 aa16.84■□□□□ 0.29
SIX4-203ENST00000556952 HOXA5P20719 270 aa16.84■□□□□ 0.29
SIX4-203ENST00000556952 SUMO2P61956 95 aaKnown RBP16.84■□□□□ 0.29
SIX4-203ENST00000556952 ZMAT4Q9H898 229 aa16.84■□□□□ 0.29
SIX4-203ENST00000556952 TRBV6-5A0A0K0K1A5 114 aa16.83■□□□□ 0.28
SIX4-203ENST00000556952 ESDP10768 282 aa16.83■□□□□ 0.28
SIX4-203ENST00000556952 LINC00310P59036 64 aa16.83■□□□□ 0.28
SIX4-203ENST00000556952 PRSS3P2Q8NHM4 247 aa16.83■□□□□ 0.28
SIX4-203ENST00000556952 NIT2Q9NQR4 276 aa16.83■□□□□ 0.28
SIX4-203ENST00000556952 CELA1Q9UNI1 258 aa16.83■□□□□ 0.28
SIX4-203ENST00000556952 LOC389332A0A1B0GUA5 103 aa16.82■□□□□ 0.28
SIX4-203ENST00000556952 DAD1P61803 113 aa16.82■□□□□ 0.28
SIX4-203ENST00000556952 NIT1Q86X76 327 aa16.82■□□□□ 0.28
SIX4-203ENST00000556952 CHCHD1Q96BP2 118 aaKnown RBP16.82■□□□□ 0.28
SIX4-203ENST00000556952 ST20Q9HBF5 79 aa16.82■□□□□ 0.28
SIX4-203ENST00000556952 NXT2Q9NPJ8 142 aaKnown RBP16.82■□□□□ 0.28
SIX4-203ENST00000556952 LINC00614P0C842 121 aa16.81■□□□□ 0.28
SIX4-203ENST00000556952 Q6ZSN1 163 aa16.81■□□□□ 0.28
SIX4-203ENST00000556952 PMCHP20382 165 aa16.81■□□□□ 0.28
SIX4-203ENST00000556952 IFI27P40305 119 aaPredicted RBP16.81■□□□□ 0.28
SIX4-203ENST00000556952 RPL32P62910 135 aaKnown RBP16.81■□□□□ 0.28
SIX4-203ENST00000556952 RNASEKQ6P5S7 137 aaKnown RBP16.81■□□□□ 0.28
SIX4-203ENST00000556952 FA2HQ7L5A8 372 aa16.81■□□□□ 0.28
SIX4-203ENST00000556952 URB1-AS1Q96HZ7 61 aa16.81■□□□□ 0.28
SIX4-203ENST00000556952 SMIM2Q9BVW6 85 aa16.81■□□□□ 0.28
SIX4-203ENST00000556952 TRGV4A0A0C4DH28 118 aa16.8■□□□□ 0.28
SIX4-203ENST00000556952 K7EQD1 137 aa16.8■□□□□ 0.28
SIX4-203ENST00000556952 TRBV10-1A0A0K0K1A3 114 aa16.79■□□□□ 0.28
SIX4-203ENST00000556952 HIST3H2BBQ8N257 126 aa16.79■□□□□ 0.28
SIX4-203ENST00000556952 Q8N8P6 123 aa16.79■□□□□ 0.28
SIX4-203ENST00000556952 DNAJC30Q96LL9 226 aa16.79■□□□□ 0.28
SIX4-203ENST00000556952 AP5S1Q9NUS5 200 aa16.79■□□□□ 0.28
SIX4-203ENST00000556952 DNAH7Q8WXX0 4024 aa16.79■□□□□ 0.28
SIX4-203ENST00000556952 TRBV6-4A0A1B0GX49 114 aa16.78■□□□□ 0.28
SIX4-203ENST00000556952 NUPR1O60356 82 aa16.78■□□□□ 0.28
SIX4-203ENST00000556952 FHL2Q14192 279 aa16.78■□□□□ 0.28
SIX4-203ENST00000556952 IGLV2-18A0A075B6J9 118 aa16.77■□□□□ 0.28
SIX4-203ENST00000556952 HSBP1O75506 76 aa16.77■□□□□ 0.28
SIX4-203ENST00000556952 TMEM70Q9BUB7 260 aa16.77■□□□□ 0.28
SIX4-203ENST00000556952 SDHAF1A6NFY7 115 aa16.77■□□□□ 0.27
SIX4-203ENST00000556952 LINC01546A6NGU7 62 aa16.77■□□□□ 0.27
SIX4-203ENST00000556952 S100A2P29034 98 aa16.77■□□□□ 0.27
SIX4-203ENST00000556952 POLR2KP53803 58 aaKnown RBP16.77■□□□□ 0.27
SIX4-203ENST00000556952 SLC25A29Q8N8R3 303 aa16.77■□□□□ 0.27
SIX4-203ENST00000556952 A0A0J9YWU9 116 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 ATP5G1P05496 136 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 P0DMU3 169 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 FAM231AP0DMU4 169 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 FAM231CP0DMU5 169 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 RHOHQ15669 191 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 PDZD11Q5EBL8 140 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 NEXN-AS1Q8NBZ9 246 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 TNFRSF18Q9Y5U5 241 aa16.76■□□□□ 0.27
SIX4-203ENST00000556952 K7EMI3 77 aa16.75■□□□□ 0.27
SIX4-203ENST00000556952 TRBV27A0A0K0K1C4 114 aa16.74■□□□□ 0.27
SIX4-203ENST00000556952 VCYO14598 125 aa16.74■□□□□ 0.27
SIX4-203ENST00000556952 RPL36AP83881 106 aaKnown RBP16.72■□□□□ 0.27
SIX4-203ENST00000556952 RPL36ALQ969Q0 106 aaKnown RBP16.72■□□□□ 0.27
SIX4-203ENST00000556952 TMEM18Q96B42 140 aa16.72■□□□□ 0.27
SIX4-203ENST00000556952 PRADC1Q9BSG0 188 aa16.72■□□□□ 0.27
SIX4-203ENST00000556952 HHLA3Q9XRX5 114 aa16.72■□□□□ 0.27
SIX4-203ENST00000556952 C12orf74Q32Q52 190 aa16.72■□□□□ 0.27
SIX4-203ENST00000556952 PACRGQ96M98 296 aaPredicted RBP16.72■□□□□ 0.27
SIX4-203ENST00000556952 KIR2DL4Q99706 377 aa16.72■□□□□ 0.27
SIX4-203ENST00000556952 PRO0255Q9UI72 69 aa16.72■□□□□ 0.27
SIX4-203ENST00000556952 TRBV7-3A0A075B6L6 115 aa16.71■□□□□ 0.27
SIX4-203ENST00000556952 AMTP48728 403 aa16.71■□□□□ 0.27
SIX4-203ENST00000556952 Q9UF83 564 aa16.71■□□□□ 0.27
SIX4-203ENST00000556952 IGHV1-24A0A0C4DH33 117 aa16.7■□□□□ 0.26
SIX4-203ENST00000556952 TCAPO15273 167 aa16.7■□□□□ 0.26
SIX4-203ENST00000556952 CRYBA4P53673 196 aa16.7■□□□□ 0.26
SIX4-203ENST00000556952 HIST1H2BLQ99880 126 aa16.7■□□□□ 0.26
SIX4-203ENST00000556952 IFITM10A6NMD0 228 aa16.69■□□□□ 0.26
SIX4-203ENST00000556952 I3L3M4 83 aa16.69■□□□□ 0.26
SIX4-203ENST00000556952 LAGE3Q14657 143 aa16.69■□□□□ 0.26
SIX4-203ENST00000556952 ORMDL2Q53FV1 153 aa16.69■□□□□ 0.26
SIX4-203ENST00000556952 FAM19A2Q8N3H0 131 aa16.69■□□□□ 0.26
SIX4-203ENST00000556952 LOC105371267A0A1B0GV96 52 aa16.68■□□□□ 0.26
SIX4-203ENST00000556952 ZNRF2Q8NHG8 242 aa16.68■□□□□ 0.26
SIX4-203ENST00000556952 C11orf45Q8TAV5 145 aa16.68■□□□□ 0.26
SIX4-203ENST00000556952 FABP4P15090 132 aa16.68■□□□□ 0.26
SIX4-203ENST00000556952 NEGR1Q7Z3B1 354 aa16.68■□□□□ 0.26
SIX4-203ENST00000556952 WWC2-AS2Q96NR7 200 aa16.67■□□□□ 0.26
SIX4-203ENST00000556952 HBDP02042 147 aa16.66■□□□□ 0.26
SIX4-203ENST00000556952 PMCHL1Q16048 86 aa16.66■□□□□ 0.26
SIX4-203ENST00000556952 DAZ4Q86SG3 579 aaKnown RBP16.66■□□□□ 0.26
SIX4-203ENST00000556952 DAZ3Q9NR90 486 aaKnown RBP16.66■□□□□ 0.26
SIX4-203ENST00000556952 GAGE12JA6NER3 117 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 F5H768 121 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 FCER1GP30273 86 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 UBE2D3P61077 147 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 UBE2D2P62837 147 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 GAGE1Q13065 139 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 GAGE4Q13068 117 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 GAGE5Q13069 117 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 GAGE13Q4V321 117 aa16.65■□□□□ 0.26
SIX4-203ENST00000556952 PAX4O43316 350 aa16.64■□□□□ 0.25
SIX4-203ENST00000556952 Q6ZTC4 211 aa16.64■□□□□ 0.25
SIX4-203ENST00000556952 A0A096LNJ9 63 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms