RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 NDUFAF1Q9Y375 327 aa-2.51□□□□□ -2.81
LINC00648-203ENST00000556923 DNAH9Q9NYC9 4486 aa-2.51□□□□□ -2.81
LINC00648-203ENST00000556923 SACSQ9NZJ4 4579 aa-2.51□□□□□ -2.81
LINC00648-203ENST00000556923 G3V318 75 aa-2.52□□□□□ -2.81
LINC00648-203ENST00000556923 MT1HL1P0DM35 61 aa-2.52□□□□□ -2.81
LINC00648-203ENST00000556923 HRCT1Q6UXD1 115 aa-2.52□□□□□ -2.81
LINC00648-203ENST00000556923 STX19Q8N4C7 294 aa-2.52□□□□□ -2.81
LINC00648-203ENST00000556923 V9GYV3 84 aa-2.52□□□□□ -2.81
LINC00648-203ENST00000556923 CEP295Q9C0D2 2601 aa-2.52□□□□□ -2.81
LINC00648-203ENST00000556923 TRAV22A0A0B4J277 110 aa-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 LOC107984640A0A0U1RRK4 108 aa-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 PNMA8CA0A1B0GUJ8 204 aa-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 TCTAP57738 103 aa-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 SLC25A26Q70HW3 274 aa-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 COX7B2Q8TF08 81 aa-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 IFI27L1Q96BM0 104 aa-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 YTHDC2Q9H6S0 1430 aaKnown RBP-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 ARAP1Q96P48 1450 aa-2.53□□□□□ -2.81
LINC00648-203ENST00000556923 M0R2T5 61 aa-2.54□□□□□ -2.82
LINC00648-203ENST00000556923 BRK1Q8WUW1 75 aa-2.54□□□□□ -2.82
LINC00648-203ENST00000556923 ACACAQ13085 2346 aa-2.54□□□□□ -2.82
LINC00648-203ENST00000556923 PKD1L2Q7Z442 2459 aa-2.54□□□□□ -2.82
LINC00648-203ENST00000556923 USF3Q68DE3 2245 aa-2.55□□□□□ -2.82
LINC00648-203ENST00000556923 C20orf197Q8N268 126 aa-2.55□□□□□ -2.82
LINC00648-203ENST00000556923 TAS2R8Q9NYW2 309 aa-2.55□□□□□ -2.82
LINC00648-203ENST00000556923 LYSTQ99698 3801 aa-2.55□□□□□ -2.82
LINC00648-203ENST00000556923 IQSEC2Q5JU85 1478 aa-2.56□□□□□ -2.82
LINC00648-203ENST00000556923 A0A1B0GW64 132 aa-2.56□□□□□ -2.82
LINC00648-203ENST00000556923 UQCRQO14949 82 aa-2.56□□□□□ -2.82
LINC00648-203ENST00000556923 DEGS1O15121 323 aa-2.56□□□□□ -2.82
LINC00648-203ENST00000556923 SLC25A6P12236 298 aa-2.56□□□□□ -2.82
LINC00648-203ENST00000556923 NPC2P61916 151 aa-2.56□□□□□ -2.82
LINC00648-203ENST00000556923 DCUN1D2Q6PH85 259 aa-2.56□□□□□ -2.82
LINC00648-203ENST00000556923 NDUFA11Q86Y39 141 aa-2.56□□□□□ -2.82
LINC00648-203ENST00000556923 KIAA0100Q14667 2235 aaKnown RBP-2.57□□□□□ -2.82
LINC00648-203ENST00000556923 UTP20O75691 2785 aaKnown RBP-2.57□□□□□ -2.82
LINC00648-203ENST00000556923 TRBV10-3A0A0K0K1G6 114 aa-2.57□□□□□ -2.82
LINC00648-203ENST00000556923 SLC25A5P05141 298 aaKnown RBP-2.57□□□□□ -2.82
LINC00648-203ENST00000556923 PLGLB1Q02325 96 aa-2.57□□□□□ -2.82
LINC00648-203ENST00000556923 MED31Q9Y3C7 131 aa-2.57□□□□□ -2.82
LINC00648-203ENST00000556923 DNAH11Q96DT5 4516 aa-2.57□□□□□ -2.82
LINC00648-203ENST00000556923 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.57□□□□□ -2.82
LINC00648-203ENST00000556923 A2MP01023 1474 aa-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 BCL9LQ86UU0 1499 aa-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 PARP14Q460N5 1801 aa-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 NRXN2Q9P2S2 1712 aa-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 TRAV2A0A0B4J234 112 aa-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 RPL22P35268 128 aaKnown RBP-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 MYO7BQ6PIF6 2116 aa-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 TMED4Q7Z7H5 227 aa-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 METTL1Q9UBP6 276 aaKnown RBP-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 PTPRMP28827 1452 aa-2.58□□□□□ -2.82
LINC00648-203ENST00000556923 KALRNO60229 2985 aa-2.59□□□□□ -2.82
LINC00648-203ENST00000556923 SCP2D1Q9UJQ7 156 aa-2.59□□□□□ -2.82
LINC00648-203ENST00000556923 ARFGEF1Q9Y6D6 1849 aa-2.59□□□□□ -2.82
LINC00648-203ENST00000556923 CCDC171Q6TFL3 1326 aa-2.6□□□□□ -2.83
LINC00648-203ENST00000556923 KRTAP19-6Q3LI70 58 aa-2.6□□□□□ -2.83
LINC00648-203ENST00000556923 HSD17B12Q53GQ0 312 aa-2.6□□□□□ -2.83
LINC00648-203ENST00000556923 C3orf33Q6P1S2 294 aa-2.6□□□□□ -2.83
LINC00648-203ENST00000556923 SPAG11AQ6PDA7 123 aa-2.6□□□□□ -2.83
LINC00648-203ENST00000556923 RELNP78509 3460 aa-2.6□□□□□ -2.83
LINC00648-203ENST00000556923 CFAP46Q8IYW2 2715 aa-2.6□□□□□ -2.83
LINC00648-203ENST00000556923 MT1XP80297 61 aa-2.61□□□□□ -2.83
LINC00648-203ENST00000556923 MRPS15P82914 257 aaKnown RBP-2.61□□□□□ -2.83
LINC00648-203ENST00000556923 CCDC32Q9BV29 185 aa-2.61□□□□□ -2.83
LINC00648-203ENST00000556923 TRAPPC2LQ9UL33 140 aa-2.61□□□□□ -2.83
LINC00648-203ENST00000556923 SMG1Q96Q15 3661 aaKnown RBP-2.62□□□□□ -2.83
LINC00648-203ENST00000556923 ARHGAP31Q2M1Z3 1444 aa-2.62□□□□□ -2.83
LINC00648-203ENST00000556923 DMXL1Q9Y485 3027 aa-2.64□□□□□ -2.83
LINC00648-203ENST00000556923 TCRAP04437 139 aa-2.64□□□□□ -2.83
LINC00648-203ENST00000556923 SERPINB1P30740 379 aa-2.64□□□□□ -2.83
LINC00648-203ENST00000556923 STX12Q86Y82 276 aa-2.64□□□□□ -2.83
LINC00648-203ENST00000556923 EIF3AQ14152 1382 aaKnown RBP-2.64□□□□□ -2.83
LINC00648-203ENST00000556923 SIPA1L3O60292 1781 aaPredicted RBP-2.64□□□□□ -2.83
LINC00648-203ENST00000556923 PIN1P1O15428 100 aa-2.65□□□□□ -2.83
LINC00648-203ENST00000556923 HIST1H1BP16401 226 aaKnown RBP-2.65□□□□□ -2.83
LINC00648-203ENST00000556923 TMEM78Q5T7P6 136 aa-2.65□□□□□ -2.83
LINC00648-203ENST00000556923 DYNLRB2Q8TF09 96 aa-2.65□□□□□ -2.83
LINC00648-203ENST00000556923 SLC35B3Q9H1N7 401 aa-2.65□□□□□ -2.83
LINC00648-203ENST00000556923 ERG28Q9UKR5 140 aa-2.65□□□□□ -2.83
LINC00648-203ENST00000556923 PLXNB2O15031 1838 aa-2.65□□□□□ -2.83
LINC00648-203ENST00000556923 SYNMO15061 1565 aa-2.66□□□□□ -2.83
LINC00648-203ENST00000556923 BICRAQ9NZM4 1560 aa-2.66□□□□□ -2.83
LINC00648-203ENST00000556923 H0YAA0 97 aa-2.66□□□□□ -2.84
LINC00648-203ENST00000556923 POLR2HP52434 150 aaKnown RBP-2.66□□□□□ -2.84
LINC00648-203ENST00000556923 THEM6Q8WUY1 208 aa-2.66□□□□□ -2.84
LINC00648-203ENST00000556923 CSMD1Q96PZ7 3565 aa-2.66□□□□□ -2.84
LINC00648-203ENST00000556923 FAM107AO95990 144 aa-2.67□□□□□ -2.84
LINC00648-203ENST00000556923 SPCS1Q9Y6A9 102 aa-2.67□□□□□ -2.84
LINC00648-203ENST00000556923 ACACBO00763 2458 aa-2.67□□□□□ -2.84
LINC00648-203ENST00000556923 C10orf71Q711Q0 1435 aa-2.68□□□□□ -2.84
LINC00648-203ENST00000556923 ZMYM4Q5VZL5 1548 aa-2.68□□□□□ -2.84
LINC00648-203ENST00000556923 WNK3Q9BYP7 1800 aa-2.68□□□□□ -2.84
LINC00648-203ENST00000556923 COL14A1Q05707 1796 aaKnown RBP-2.68□□□□□ -2.84
LINC00648-203ENST00000556923 A0A1W2PRE2 83 aa-2.68□□□□□ -2.84
LINC00648-203ENST00000556923 HOPXQ9BPY8 73 aaPredicted RBP-2.68□□□□□ -2.84
LINC00648-203ENST00000556923 STOML2Q9UJZ1 356 aa-2.68□□□□□ -2.84
LINC00648-203ENST00000556923 MED23Q9ULK4 1368 aa-2.69□□□□□ -2.84
LINC00648-203ENST00000556923 TRAV1-2A0A0B4J238 106 aa-2.69□□□□□ -2.84
LINC00648-203ENST00000556923 MT1BP07438 61 aa-2.69□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms