RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 IGLV1-51P01701 117 aa13.4□□□□□ -0.26
SDR39U1-220ENST00000556548 SYT8Q8NBV8 401 aa13.4□□□□□ -0.26
SDR39U1-220ENST00000556548 IGHV3OR16-12A0A075B7B8 117 aa13.4□□□□□ -0.26
SDR39U1-220ENST00000556548 hDV102S1A0JD36 115 aa13.4□□□□□ -0.26
SDR39U1-220ENST00000556548 SUMO2P61956 95 aaKnown RBP13.4□□□□□ -0.26
SDR39U1-220ENST00000556548 SUMO4Q6EEV6 95 aa13.4□□□□□ -0.26
SDR39U1-220ENST00000556548 LINC01546A6NGU7 62 aa13.39□□□□□ -0.27
SDR39U1-220ENST00000556548 FCER1GP30273 86 aa13.39□□□□□ -0.27
SDR39U1-220ENST00000556548 SEC11AP67812 179 aa13.39□□□□□ -0.27
SDR39U1-220ENST00000556548 SMIM2Q9BVW6 85 aa13.39□□□□□ -0.27
SDR39U1-220ENST00000556548 INSP01308 110 aa13.38□□□□□ -0.27
SDR39U1-220ENST00000556548 LAGE3Q14657 143 aa13.38□□□□□ -0.27
SDR39U1-220ENST00000556548 IFI27L1Q96BM0 104 aa13.38□□□□□ -0.27
SDR39U1-220ENST00000556548 ZNF56Q15929 161 aa13.38□□□□□ -0.27
SDR39U1-220ENST00000556548 K7EP34 96 aa13.37□□□□□ -0.27
SDR39U1-220ENST00000556548 LINC01545Q5VT33 79 aa13.37□□□□□ -0.27
SDR39U1-220ENST00000556548 TRPT1Q86TN4 253 aaKnown RBP13.37□□□□□ -0.27
SDR39U1-220ENST00000556548 IGHV3-73A0A0B4J1V6 119 aa13.36□□□□□ -0.27
SDR39U1-220ENST00000556548 CRYGDP07320 174 aa13.36□□□□□ -0.27
SDR39U1-220ENST00000556548 POM121L12Q8N7R1 296 aa13.36□□□□□ -0.27
SDR39U1-220ENST00000556548 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.36□□□□□ -0.27
SDR39U1-220ENST00000556548 SPATA3Q8NHX4 192 aa13.36□□□□□ -0.27
SDR39U1-220ENST00000556548 C9orf118A6NHY6 69 aa13.36□□□□□ -0.27
SDR39U1-220ENST00000556548 F8P00451 2351 aa13.35□□□□□ -0.27
SDR39U1-220ENST00000556548 AZU1P20160 251 aa13.35□□□□□ -0.27
SDR39U1-220ENST00000556548 LINC00482Q8N8I6 264 aa13.35□□□□□ -0.27
SDR39U1-220ENST00000556548 C20orf78Q9BR46 151 aa13.35□□□□□ -0.27
SDR39U1-220ENST00000556548 RPL35AP18077 110 aaKnown RBP13.35□□□□□ -0.27
SDR39U1-220ENST00000556548 SIGMAR1Q99720 223 aa13.35□□□□□ -0.27
SDR39U1-220ENST00000556548 H3BRM9 83 aa13.34□□□□□ -0.27
SDR39U1-220ENST00000556548 NOTCH3Q9UM47 2321 aa13.34□□□□□ -0.27
SDR39U1-220ENST00000556548 C1orf158Q8N1D5 194 aa13.34□□□□□ -0.27
SDR39U1-220ENST00000556548 ATRQ13535 2644 aa13.34□□□□□ -0.27
SDR39U1-220ENST00000556548 BEAN1Q3B7T3 259 aa13.33□□□□□ -0.28
SDR39U1-220ENST00000556548 TMEM97Q5BJF2 176 aa13.33□□□□□ -0.28
SDR39U1-220ENST00000556548 ZNF415Q09FC8 603 aa13.33□□□□□ -0.28
SDR39U1-220ENST00000556548 OR5A1Q8NGJ0 315 aa13.33□□□□□ -0.28
SDR39U1-220ENST00000556548 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.28
SDR39U1-220ENST00000556548 TCTAP57738 103 aa13.32□□□□□ -0.28
SDR39U1-220ENST00000556548 A6NDN8 102 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 PRSS1P07477 247 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 GTSF1LQ9H1H1 148 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 DKK2Q9UBU2 259 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 M0R2P5 195 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 PPP1R17O96001 155 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 COX8AP10176 69 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 SMAGPQ0VAQ4 97 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 C2orf91Q6ZV80 131 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 C11orf72Q8NBR9 251 aa13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 MRPL16Q9NX20 251 aaKnown RBP13.31□□□□□ -0.28
SDR39U1-220ENST00000556548 H3BUT2 72 aa13.3□□□□□ -0.28
SDR39U1-220ENST00000556548 M0QY20 66 aa13.3□□□□□ -0.28
SDR39U1-220ENST00000556548 MORN3Q6PF18 240 aaPredicted RBP13.3□□□□□ -0.28
SDR39U1-220ENST00000556548 TRRAPQ9Y4A5 3859 aa13.3□□□□□ -0.28
SDR39U1-220ENST00000556548 TEP1Q99973 2627 aaKnown RBP13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 SDHAF1A6NFY7 115 aa13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 CMC4P56277 68 aaPredicted RBP13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 LGALS9BQ3B8N2 356 aa13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 ORMDL2Q53FV1 153 aa13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 LGALS9CQ6DKI2 356 aa13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 GIG44P09565 113 aaPredicted RBP13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 P0DMU3 169 aa13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 FAM231AP0DMU4 169 aa13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 FAM231CP0DMU5 169 aa13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 HSD52Q0P140 79 aa13.29□□□□□ -0.28
SDR39U1-220ENST00000556548 CFAP161Q6P656 301 aa13.28□□□□□ -0.28
SDR39U1-220ENST00000556548 POLR2KP53803 58 aaKnown RBP13.28□□□□□ -0.28
SDR39U1-220ENST00000556548 LINC00467Q9BRT7 94 aa13.27□□□□□ -0.28
SDR39U1-220ENST00000556548 SPCS1Q9Y6A9 102 aa13.27□□□□□ -0.28
SDR39U1-220ENST00000556548 RPL24P83731 157 aaKnown RBP13.26□□□□□ -0.29
SDR39U1-220ENST00000556548 C2orf66Q6UXQ4 117 aa13.26□□□□□ -0.29
SDR39U1-220ENST00000556548 SCGB3A1Q96QR1 104 aa13.26□□□□□ -0.29
SDR39U1-220ENST00000556548 A6NJY4 79 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 VCYO14598 125 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 ATP5LO75964 103 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 ODF1Q14990 250 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 CFAP126Q5VTH2 177 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 Q6ZSN1 163 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 TOMM6Q96B49 74 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 Q9UF83 564 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 A0A1W2PPM0 123 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 CKS1BP61024 79 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 CITED1Q99966 193 aa13.25□□□□□ -0.29
SDR39U1-220ENST00000556548 A8MWV9 139 aa13.24□□□□□ -0.29
SDR39U1-220ENST00000556548 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.24□□□□□ -0.29
SDR39U1-220ENST00000556548 KIR2DL4Q99706 377 aa13.24□□□□□ -0.29
SDR39U1-220ENST00000556548 FAM110AQ9BQ89 295 aa13.24□□□□□ -0.29
SDR39U1-220ENST00000556548 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
SDR39U1-220ENST00000556548 GAGE12HA6NDE8 117 aa13.24□□□□□ -0.29
SDR39U1-220ENST00000556548 ZFP2Q6ZN57 461 aa13.24□□□□□ -0.29
SDR39U1-220ENST00000556548 SPXQ9BT56 116 aa13.24□□□□□ -0.29
SDR39U1-220ENST00000556548 TRAV26-1A0A087WT03 109 aa13.23□□□□□ -0.29
SDR39U1-220ENST00000556548 TRGV1A0A0A0MS02 117 aa13.23□□□□□ -0.29
SDR39U1-220ENST00000556548 TRBV6-5A0A0K0K1A5 114 aa13.23□□□□□ -0.29
SDR39U1-220ENST00000556548 CRYBA4P53673 196 aa13.23□□□□□ -0.29
SDR39U1-220ENST00000556548 NAA38Q9BRA0 125 aaKnown RBP13.23□□□□□ -0.29
SDR39U1-220ENST00000556548 RPL39P62891 51 aaKnown RBP13.23□□□□□ -0.29
SDR39U1-220ENST00000556548 TRBV27A0A0K0K1C4 114 aa13.22□□□□□ -0.29
SDR39U1-220ENST00000556548 K7EMI3 77 aa13.22□□□□□ -0.29
SDR39U1-220ENST00000556548 TP53TG1Q9Y2A0 90 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms