RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 APCP25054 2843 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 MYMXA0A1B0GTQ4 84 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 A0A1B0GWB2 263 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 GAGE10A6NGK3 116 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 C11orf86A6NJI1 115 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 RBMY1A1P0DJD3 496 aaKnown RBP3.97□□□□□ -1.77
GPHN-213ENST00000556501 RBMY1CP0DJD4 496 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 FABP2P12104 132 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 PMVKQ15126 192 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 RBMY1FQ15415 496 aaKnown RBP3.97□□□□□ -1.77
GPHN-213ENST00000556501 DEFB136Q30KP8 78 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 PIK3CD-AS1Q5SR53 167 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 FAM74A4Q5TZK3 123 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 C18orf65Q6ZTR6 163 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 TEX29Q8N6K0 151 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 PTH2Q96A98 100 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 Q96MF0 132 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 DUX5Q96PT3 197 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 SPAG8Q99932 426 aaPredicted RBP3.97□□□□□ -1.77
GPHN-213ENST00000556501 NAA38Q9BRA0 125 aaKnown RBP3.97□□□□□ -1.77
GPHN-213ENST00000556501 LINC00467Q9BRT7 94 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 PRADC1Q9BSG0 188 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 CST9LQ9H4G1 147 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 PEMTQ9UBM1 199 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 CBY1Q9Y3M2 126 aa3.97□□□□□ -1.77
GPHN-213ENST00000556501 AGRNO00468 2067 aa3.96□□□□□ -1.77
GPHN-213ENST00000556501 RBMY1BA6NDE4 496 aaKnown RBP3.96□□□□□ -1.78
GPHN-213ENST00000556501 RBMY1EA6NEQ0 496 aaKnown RBP3.96□□□□□ -1.78
GPHN-213ENST00000556501 KNCNA6PVL3 124 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 H3BMM0 161 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 K7ERJ3 54 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 RBMY1DP0C7P1 496 aaKnown RBP3.96□□□□□ -1.78
GPHN-213ENST00000556501 DEFB131AP59861 70 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 HERVK_113P61574 105 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 RPL39P62891 51 aaKnown RBP3.96□□□□□ -1.78
GPHN-213ENST00000556501 ZNF876PQ49A33 203 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 OCIAD2Q56VL3 154 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 TMEM61Q8N0U2 210 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 RAB37Q96AX2 223 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 HIST1H4GQ99525 98 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 MAP6D1Q9H9H5 199 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 NHP2Q9NX24 153 aaKnown RBP3.96□□□□□ -1.78
GPHN-213ENST00000556501 SPCS1Q9Y6A9 102 aa3.96□□□□□ -1.78
GPHN-213ENST00000556501 NACAE9PAV3 2078 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 GAGE12BA1L429 117 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 ZNF815PA8K554 130 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 IGLL5B9A064 214 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 I3L3M4 83 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 MALP21145 153 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 ZNF415Q09FC8 603 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 C12orf74Q32Q52 190 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 KHDC1LQ5JSQ8 128 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 NFE4Q86UQ8 179 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 C20orf203Q8NBC4 194 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 KLHL30-AS1Q8NEE0 82 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 DYNLRB2Q8TF09 96 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 MYO9AB2RTY4 2548 aa3.95□□□□□ -1.78
GPHN-213ENST00000556501 ITPR3Q14573 2671 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 CCDC168Q8NDH2 2452 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 TRAV25A0A0B4J276 109 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 DNAJC9-AS1A6NH13 148 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 A8MWV9 139 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 K7ERU9 68 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 M0R2P5 195 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 INSP01308 110 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 P0DMU3 169 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 FAM231AP0DMU4 169 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 FAM231CP0DMU5 169 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 TSPEAR-AS2P59090 65 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 SCGB2A2Q13296 93 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 FHL3Q13643 280 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 RRN3P1Q2M238 152 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 DEFB114Q30KQ6 69 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 CD300EQ496F6 205 aaPredicted RBP3.94□□□□□ -1.78
GPHN-213ENST00000556501 Q6ZSV7 163 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 ZNRF2Q8NHG8 242 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 DLX4Q92988 240 aaPredicted RBP3.94□□□□□ -1.78
GPHN-213ENST00000556501 PLEKHB2Q96CS7 222 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 DUX3Q96PT4 197 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 SPXQ9BT56 116 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 SPANXB1Q9NS25 103 aaPredicted RBP3.94□□□□□ -1.78
GPHN-213ENST00000556501 PYGO1Q9Y3Y4 419 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 FBN2P35556 2912 aa3.94□□□□□ -1.78
GPHN-213ENST00000556501 FLNAP21333 2647 aaKnown RBP3.93□□□□□ -1.78
GPHN-213ENST00000556501 IGLV4-3A0A075B6K6 122 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 RHODO00212 210 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 UBE2D1P51668 147 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 CRYBA4P53673 196 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 EMP1P54849 157 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 BEAN1Q3B7T3 259 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 ODF3L2Q3SX64 289 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 SCGB1D4Q6XE38 83 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 C11orf72Q8NBR9 251 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 DEFB104AQ8WTQ1 72 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 ZNF479Q96JC4 524 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 AMELXQ99217 191 aa3.93□□□□□ -1.78
GPHN-213ENST00000556501 FLNBO75369 2602 aaKnown RBP3.93□□□□□ -1.78
GPHN-213ENST00000556501 ASH1LQ9NR48 2969 aaKnown RBP3.93□□□□□ -1.78
GPHN-213ENST00000556501 SETXQ7Z333 2677 aaKnown RBP3.92□□□□□ -1.78
GPHN-213ENST00000556501 ZANQ9Y493 2812 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms