RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 PRADC1Q9BSG0 188 aa7.78□□□□□ -1.16
TMEM260-208ENST00000555905 EDA2RQ9HAV5 297 aa7.78□□□□□ -1.16
TMEM260-208ENST00000555905 PRO0255Q9UI72 69 aa7.78□□□□□ -1.16
TMEM260-208ENST00000555905 LAMTOR2Q9Y2Q5 125 aa7.78□□□□□ -1.16
TMEM260-208ENST00000555905 DEFB131BA0A096LNP1 70 aa7.77□□□□□ -1.17
TMEM260-208ENST00000555905 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
TMEM260-208ENST00000555905 PHOX2AO14813 284 aa7.77□□□□□ -1.17
TMEM260-208ENST00000555905 PAX4O43316 350 aa7.77□□□□□ -1.17
TMEM260-208ENST00000555905 TNFRSF6BO95407 300 aa7.77□□□□□ -1.17
TMEM260-208ENST00000555905 CRYBA4P53673 196 aa7.77□□□□□ -1.17
TMEM260-208ENST00000555905 ALKBH7Q9BT30 221 aaPredicted RBP7.77□□□□□ -1.17
TMEM260-208ENST00000555905 NIT2Q9NQR4 276 aa7.77□□□□□ -1.17
TMEM260-208ENST00000555905 TNFRSF18Q9Y5U5 241 aa7.77□□□□□ -1.17
TMEM260-208ENST00000555905 TRAV10A0A0B4J240 114 aa7.76□□□□□ -1.17
TMEM260-208ENST00000555905 GAS8-AS1O95177 125 aa7.76□□□□□ -1.17
TMEM260-208ENST00000555905 P0DMU3 169 aa7.76□□□□□ -1.17
TMEM260-208ENST00000555905 FAM231AP0DMU4 169 aa7.76□□□□□ -1.17
TMEM260-208ENST00000555905 FAM231CP0DMU5 169 aa7.76□□□□□ -1.17
TMEM260-208ENST00000555905 NRACQ8N912 160 aa7.76□□□□□ -1.17
TMEM260-208ENST00000555905 RPL39LQ96EH5 51 aaKnown RBP7.76□□□□□ -1.17
TMEM260-208ENST00000555905 DNAJC30Q96LL9 226 aa7.76□□□□□ -1.17
TMEM260-208ENST00000555905 ST20Q9HBF5 79 aa7.76□□□□□ -1.17
TMEM260-208ENST00000555905 TRAV26-1A0A087WT03 109 aa7.75□□□□□ -1.17
TMEM260-208ENST00000555905 NPYP01303 97 aa7.75□□□□□ -1.17
TMEM260-208ENST00000555905 RPL36AP83881 106 aaKnown RBP7.75□□□□□ -1.17
TMEM260-208ENST00000555905 NEXN-AS1Q8NBZ9 246 aa7.75□□□□□ -1.17
TMEM260-208ENST00000555905 RPL36ALQ969Q0 106 aaKnown RBP7.75□□□□□ -1.17
TMEM260-208ENST00000555905 C20orf78Q9BR46 151 aa7.75□□□□□ -1.17
TMEM260-208ENST00000555905 MAP1LC3AQ9H492 121 aa7.75□□□□□ -1.17
TMEM260-208ENST00000555905 FBN3Q75N90 2809 aa7.75□□□□□ -1.17
TMEM260-208ENST00000555905 TRBV7-3A0A075B6L6 115 aa7.74□□□□□ -1.17
TMEM260-208ENST00000555905 A0A0J9YY99 117 aa7.74□□□□□ -1.17
TMEM260-208ENST00000555905 TRBV6-5A0A0K0K1A5 114 aa7.74□□□□□ -1.17
TMEM260-208ENST00000555905 GYPEP15421 78 aa7.74□□□□□ -1.17
TMEM260-208ENST00000555905 RAB5BP61020 215 aa7.74□□□□□ -1.17
TMEM260-208ENST00000555905 SUMO2P61956 95 aaKnown RBP7.74□□□□□ -1.17
TMEM260-208ENST00000555905 ZNRF2Q8NHG8 242 aa7.74□□□□□ -1.17
TMEM260-208ENST00000555905 LOC389332A0A1B0GUA5 103 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 GAGE12JA6NER3 117 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 SDHAF1A6NFY7 115 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 H3BNG1 76 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 PMCHP20382 165 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 GAGE1Q13065 139 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 GAGE4Q13068 117 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 GAGE5Q13069 117 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 GAGE13Q4V321 117 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 PHLDA1Q8WV24 401 aaPredicted RBP7.73□□□□□ -1.17
TMEM260-208ENST00000555905 VSIG2Q96IQ7 327 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 Q9UF83 564 aa7.73□□□□□ -1.17
TMEM260-208ENST00000555905 STAB2Q8WWQ8 2551 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 LOC100131303A0A0U1RQF7 123 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 PRSS47A8MTI9 375 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 VCYO14598 125 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 EREGO14944 169 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 RPL32P62910 135 aaKnown RBP7.72□□□□□ -1.17
TMEM260-208ENST00000555905 MRPL23Q16540 153 aaKnown RBP7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
TMEM260-208ENST00000555905 SH2D6Q7Z4S9 175 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 BAGE3Q86Y29 109 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 PRSS3P2Q8NHM4 247 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 C18orf32Q8TCD1 76 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 TMEM70Q9BUB7 260 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 SMIM2Q9BVW6 85 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 NXT2Q9NPJ8 142 aaKnown RBP7.72□□□□□ -1.17
TMEM260-208ENST00000555905 ICOSQ9Y6W8 199 aa7.72□□□□□ -1.17
TMEM260-208ENST00000555905 I3L3M4 83 aa7.71□□□□□ -1.18
TMEM260-208ENST00000555905 UBE2D3P61077 147 aa7.71□□□□□ -1.18
TMEM260-208ENST00000555905 UBE2D2P62837 147 aa7.71□□□□□ -1.18
TMEM260-208ENST00000555905 Q0VG73 95 aa7.71□□□□□ -1.18
TMEM260-208ENST00000555905 IQCJQ1A5X6 159 aa7.71□□□□□ -1.18
TMEM260-208ENST00000555905 DAZ4Q86SG3 579 aaKnown RBP7.71□□□□□ -1.18
TMEM260-208ENST00000555905 Q8N8P6 123 aa7.71□□□□□ -1.18
TMEM260-208ENST00000555905 DAZ3Q9NR90 486 aaKnown RBP7.71□□□□□ -1.18
TMEM260-208ENST00000555905 TRBV27A0A0K0K1C4 114 aa7.7□□□□□ -1.18
TMEM260-208ENST00000555905 TCAPO15273 167 aa7.7□□□□□ -1.18
TMEM260-208ENST00000555905 IFI27P40305 119 aaPredicted RBP7.7□□□□□ -1.18
TMEM260-208ENST00000555905 POLR2KP53803 58 aaKnown RBP7.7□□□□□ -1.18
TMEM260-208ENST00000555905 FA2HQ7L5A8 372 aa7.7□□□□□ -1.18
TMEM260-208ENST00000555905 KIR2DL4Q99706 377 aa7.7□□□□□ -1.18
TMEM260-208ENST00000555905 NUPR2A6NF83 97 aa7.69□□□□□ -1.18
TMEM260-208ENST00000555905 IGLL5B9A064 214 aa7.69□□□□□ -1.18
TMEM260-208ENST00000555905 NUDT3O95989 172 aa7.69□□□□□ -1.18
TMEM260-208ENST00000555905 LINC00694P0DN24 101 aa7.69□□□□□ -1.18
TMEM260-208ENST00000555905 FCER1GP30273 86 aa7.69□□□□□ -1.18
TMEM260-208ENST00000555905 NDUFA6P56556 154 aa7.69□□□□□ -1.18
TMEM260-208ENST00000555905 COTL1Q14019 142 aa7.69□□□□□ -1.18
TMEM260-208ENST00000555905 RNASEKQ6P5S7 137 aaKnown RBP7.69□□□□□ -1.18
TMEM260-208ENST00000555905 CEMP1Q6PRD7 247 aaPredicted RBP7.69□□□□□ -1.18
TMEM260-208ENST00000555905 NEGR1Q7Z3B1 354 aa7.69□□□□□ -1.18
TMEM260-208ENST00000555905 NIT1Q86X76 327 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms