RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 Q1RN00 199 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 C10orf99Q6UWK7 81 aa7.11□□□□□ -1.27
SYNE2-213ENST00000554805 TRAV2A0A0B4J234 112 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 LINC01619G3V211 115 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 MSMBP08118 114 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 POLR2KP53803 58 aaKnown RBP7.1□□□□□ -1.27
SYNE2-213ENST00000554805 LINC00315P59091 139 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 PTH2Q96A98 100 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 MUC4Q99102 2169 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 IGLV4-69A0A075B6H9 119 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 A0A0J9YY99 117 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 KLLNB2CW77 178 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 J3QQQ9 107 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 HIST2H2BDQ6DRA6 164 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 C10orf105Q8TEF2 133 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 RAX2Q96IS3 184 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 FAM19A4Q96LR4 140 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 KIF25-AS1Q9Y6Z4 181 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 IGIPA6NJ69 53 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 SYNJ2BPP57105 145 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 ZNF876PQ49A33 203 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 Q8N1Y9 231 aa7.1□□□□□ -1.27
SYNE2-213ENST00000554805 FN1P02751 2386 aaKnown RBP7.09□□□□□ -1.27
SYNE2-213ENST00000554805 IGHV4OR15-8A0A075B7B6 117 aa7.09□□□□□ -1.27
SYNE2-213ENST00000554805 A0A087WW49 117 aa7.09□□□□□ -1.27
SYNE2-213ENST00000554805 TRBV7-9A0A0J9YWB2 115 aa7.09□□□□□ -1.27
SYNE2-213ENST00000554805 VCX2Q9H322 139 aa7.09□□□□□ -1.27
SYNE2-213ENST00000554805 IGHV1OR15-1A0A075B7D0 117 aa7.09□□□□□ -1.27
SYNE2-213ENST00000554805 IGHV4-59P01825 116 aa7.09□□□□□ -1.27
SYNE2-213ENST00000554805 TSPEAR-AS2P59090 65 aa7.09□□□□□ -1.27
SYNE2-213ENST00000554805 COX6B1P14854 86 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 ZNRF2Q8NHG8 242 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 IGHV3-16A0A0C4DH30 117 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 NDUFA11Q86Y39 141 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 DCANP1Q8TF63 244 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 BEX4Q9NWD9 120 aaPredicted RBP7.08□□□□□ -1.28
SYNE2-213ENST00000554805 PRO0461Q9UI25 63 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 PRSS2P07478 247 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 APRG1Q8IVJ8 170 aa7.08□□□□□ -1.28
SYNE2-213ENST00000554805 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 K7EMT4 169 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 AVPP01185 164 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 IGLV1-40P01703 118 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 UBE2D1P51668 147 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 TRPT1Q86TN4 253 aaKnown RBP7.07□□□□□ -1.28
SYNE2-213ENST00000554805 KNCNA6PVL3 124 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 ADARB2-AS1A8MUL3 147 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 NXPH4O95158 308 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 FOXI1Q12951 378 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 C1QTNF4Q9BXJ3 329 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 MXRA5Q9NR99 2828 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 NIPBLQ6KC79 2804 aaeCLIP7.07□□□□□ -1.28
SYNE2-213ENST00000554805 A0A0J9YX75 114 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 A8MWV9 139 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 DEFB112Q30KQ8 113 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 SPXQ9BT56 116 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 PRO1854Q9UHT4 67 aa7.07□□□□□ -1.28
SYNE2-213ENST00000554805 TRBV27A0A0K0K1C4 114 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 B4DSR2 109 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 M0QY20 66 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 LGALS9O00182 355 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 TCL1BO95988 128 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 CFC1BP0CG36 223 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 CFC1P0CG37 223 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 RPL32P62910 135 aaKnown RBP7.06□□□□□ -1.28
SYNE2-213ENST00000554805 RNASE13Q5GAN3 156 aaKnown RBP7.06□□□□□ -1.28
SYNE2-213ENST00000554805 CFAP126Q5VTH2 177 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 ITPR2Q14571 2701 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 A4D1N5 150 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 CD28P10747 220 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 KHDC1LQ5JSQ8 128 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 SLC25A29Q8N8R3 303 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 I3L3M4 83 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 IGHV3-30P01768 117 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 IGHV3-30-5P0DP03 117 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 C10orf126Q8N4M7 172 aa7.06□□□□□ -1.28
SYNE2-213ENST00000554805 A0A1B0GV72 72 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 SMCPP49901 116 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-213ENST00000554805 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 P0DMU3 169 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 FAM231AP0DMU4 169 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 FAM231CP0DMU5 169 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 RHOHQ15669 191 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 POM121L12Q8N7R1 296 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 C9orf85Q96MD7 179 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 SPATA25Q9BR10 227 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 TNFRSF18Q9Y5U5 241 aa7.05□□□□□ -1.28
SYNE2-213ENST00000554805 TRGV11A0A075B6L2 103 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 MUSTN1Q8IVN3 82 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 C20orf203Q8NBC4 194 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 PPDPFLQ8WWR9 84 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 TRBV6-5A0A0K0K1A5 114 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 C9JAW5 83 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 K7EQG2 157 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 LEPROTO15243 131 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 SPINK8P0C7L1 97 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 DUX3Q96PT4 197 aa7.04□□□□□ -1.28
SYNE2-213ENST00000554805 FLNAP21333 2647 aaKnown RBP7.04□□□□□ -1.28
SYNE2-213ENST00000554805 TRBV20-1A0A075B6N2 111 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms