RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 TRBV6-4A0A1B0GX49 114 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 M0QY20 66 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 NDUFA6P56556 154 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 Q0VG73 95 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 UFSP1Q6NVU6 142 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 DNAJC30Q96LL9 226 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 C20orf78Q9BR46 151 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 EDA2RQ9HAV5 297 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 CELA1Q9UNI1 258 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 HHLA3Q9XRX5 114 aa7.43□□□□□ -1.22
TMEM55B-205ENST00000554028 TRBV10-1A0A0K0K1A3 114 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 LOC389332A0A1B0GUA5 103 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 F5H768 121 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 K7EQD1 137 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 NPYP01303 97 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 PMCHP20382 165 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 RPL36AP83881 106 aaKnown RBP7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 RHOHQ15669 191 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 FA2HQ7L5A8 372 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 C18orf32Q8TCD1 76 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 RPL36ALQ969Q0 106 aaKnown RBP7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 PRO0255Q9UI72 69 aa7.42□□□□□ -1.22
TMEM55B-205ENST00000554028 TRBV6-5A0A0K0K1A5 114 aa7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 VCYO14598 125 aa7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 HTN3P15516 51 aa7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 GATA1P15976 413 aaPredicted RBP7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 SUMO2P61956 95 aaKnown RBP7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 FHL2Q14192 279 aa7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 C12orf74Q32Q52 190 aa7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 NRACQ8N912 160 aa7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 RPL39LQ96EH5 51 aaKnown RBP7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 NXT2Q9NPJ8 142 aaKnown RBP7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 MUC4Q99102 2169 aa7.41□□□□□ -1.22
TMEM55B-205ENST00000554028 PRSS47A8MTI9 375 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 TCAPO15273 167 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 PAX4O43316 350 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 LINC00614P0C842 121 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 IQCJQ1A5X6 159 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 Q6ZSN1 163 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 NIT1Q86X76 327 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 SLC25A29Q8N8R3 303 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 KIR2DL4Q99706 377 aa7.4□□□□□ -1.22
TMEM55B-205ENST00000554028 TRBV7-3A0A075B6L6 115 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 SDHAF1A6NFY7 115 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 GAS8-AS1O95177 125 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 G0S2P27469 103 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 CRYBA4P53673 196 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 RPL32P62910 135 aaKnown RBP7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 RNASEKQ6P5S7 137 aaKnown RBP7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 Q8N8P6 123 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 ZNRF2Q8NHG8 242 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 CHCHD1Q96BP2 118 aaKnown RBP7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 SMIM2Q9BVW6 85 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 NBEAL2Q6ZNJ1 2754 aa7.39□□□□□ -1.23
TMEM55B-205ENST00000554028 CMYA5Q8N3K9 4069 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 GAGE12JA6NER3 117 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 I3L3M4 83 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 K7EMI3 77 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 HSBP1O75506 76 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 P0DMU3 169 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 FAM231AP0DMU4 169 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 FAM231CP0DMU5 169 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 HOXA5P20719 270 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 FCER1GP30273 86 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 IFI27P40305 119 aaPredicted RBP7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 NANOS2P60321 138 aaKnown RBP7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 GAGE1Q13065 139 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 GAGE4Q13068 117 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 GAGE5Q13069 117 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 GAGE13Q4V321 117 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 LCE3BQ5TA77 95 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 NEXN-AS1Q8NBZ9 246 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 AP5S1Q9NUS5 200 aa7.38□□□□□ -1.23
TMEM55B-205ENST00000554028 DEFB131BA0A096LNP1 70 aa7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 TRAV10A0A0B4J240 114 aa7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 SERF1AO75920 110 aa7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 GYPEP15421 78 aa7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 S100A2P29034 98 aa7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 POLR2KP53803 58 aaKnown RBP7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 Q6ZTC4 211 aa7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 SH2D6Q7Z4S9 175 aa7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 DAZ4Q86SG3 579 aaKnown RBP7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 TMEM70Q9BUB7 260 aa7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 DAZ3Q9NR90 486 aaKnown RBP7.37□□□□□ -1.23
TMEM55B-205ENST00000554028 TRAV26-1A0A087WT03 109 aa7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 A0A0J9YY99 117 aa7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 TRBV27A0A0K0K1C4 114 aa7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 SNRPEP62304 92 aaKnown RBP7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 COTL1Q14019 142 aa7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 LAGE3Q14657 143 aa7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 MRPL23Q16540 153 aaKnown RBP7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 ORMDL2Q53FV1 153 aa7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 TMEM97Q5BJF2 176 aa7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 ICOSQ9Y6W8 199 aa7.36□□□□□ -1.23
TMEM55B-205ENST00000554028 H3BNG1 76 aa7.35□□□□□ -1.23
TMEM55B-205ENST00000554028 ATP6V0E2Q8NHE4 81 aa7.35□□□□□ -1.23
TMEM55B-205ENST00000554028 LOC100131303A0A0U1RQF7 123 aa7.34□□□□□ -1.23
TMEM55B-205ENST00000554028 C5orf52A6NGY3 159 aa7.34□□□□□ -1.23
TMEM55B-205ENST00000554028 LINC01549A6NIU2 74 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms