RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 CRIP1P50238 77 aa6.27□□□□□ -1.41
TDP1-208ENST00000553989 BATFQ16520 125 aa6.27□□□□□ -1.41
TDP1-208ENST00000553989 FAM104BQ5XKR9 115 aa6.27□□□□□ -1.41
TDP1-208ENST00000553989 SLC25A34Q6PIV7 304 aa6.27□□□□□ -1.41
TDP1-208ENST00000553989 ZNF738Q8NE65 137 aa6.27□□□□□ -1.41
TDP1-208ENST00000553989 A0A087X0K7 114 aa6.26□□□□□ -1.41
TDP1-208ENST00000553989 C16orf90A8MZG2 172 aa6.26□□□□□ -1.41
TDP1-208ENST00000553989 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
TDP1-208ENST00000553989 SAMD13Q5VXD3 122 aa6.26□□□□□ -1.41
TDP1-208ENST00000553989 Q6ZR54 194 aa6.26□□□□□ -1.41
TDP1-208ENST00000553989 ORMDL3Q8N138 153 aa6.26□□□□□ -1.41
TDP1-208ENST00000553989 MRPL53Q96EL3 112 aaKnown RBP6.26□□□□□ -1.41
TDP1-208ENST00000553989 C17orf77Q96MU5 243 aa6.26□□□□□ -1.41
TDP1-208ENST00000553989 SLC50A1Q9BRV3 221 aa6.26□□□□□ -1.41
TDP1-208ENST00000553989 A0A0J9YX75 114 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 SOCS3O14543 225 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 SH2D1AO60880 128 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 NUDT3O95989 172 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 INSP01308 110 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 ARMS2P0C7Q2 107 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 HIST1H1AQ02539 215 aaPredicted RBP6.25□□□□□ -1.41
TDP1-208ENST00000553989 LYZL1Q6UWQ5 148 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 C1orf158Q8N1D5 194 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 STPG4Q8N801 248 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 C15orf53Q8NAA6 179 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 PRELID3AQ96N28 172 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 CBY1Q9Y3M2 126 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 MUC4Q99102 2169 aa6.25□□□□□ -1.41
TDP1-208ENST00000553989 F5H768 121 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 SIVA1O15304 175 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 DEFB130BP0DP73 79 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 DEFB130AP0DP74 79 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 CKS2P33552 79 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 UBE2V1Q13404 147 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 SPINK13Q1W4C9 94 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 SMIM15Q7Z3B0 74 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 FER1L6-AS1Q8NA97 138 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 COX11Q9Y6N1 276 aa6.24□□□□□ -1.41
TDP1-208ENST00000553989 LINC01546A6NGU7 62 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 DUSP14O95147 198 aaKnown RBP6.23□□□□□ -1.41
TDP1-208ENST00000553989 COX8AP10176 69 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 HINT1P49773 126 aaPredicted RBP6.23□□□□□ -1.41
TDP1-208ENST00000553989 PTTG1IPP53801 180 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 TWIST1Q15672 202 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 ATOH7Q8N100 152 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 C20orf173Q96LM9 149 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 CNFNQ9BYD5 112 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 LENEPQ9Y5L5 61 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 PKHD1P08F94 4074 aa6.23□□□□□ -1.41
TDP1-208ENST00000553989 NBDYA0A0U1RRE5 68 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 LYRM9A8MSI8 78 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 M0R3E3 92 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 HBDP02042 147 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 ORM1P02763 201 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 PRM2P04554 102 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 IGLC6P0CF74 106 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 HTN1P15515 57 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 CCL18P55774 89 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 CACNG7P62955 275 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 MRPL51Q4U2R6 128 aaKnown RBP6.22□□□□□ -1.41
TDP1-208ENST00000553989 IGFL4Q6B9Z1 124 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 C6orf223Q8N319 242 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 MAPKAPK5-AS1Q8N8E1 139 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 C8orf49Q96NF6 230 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 TPPP3Q9BW30 176 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 KRTAP4-5Q9BYR2 181 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 MAP1LC3AQ9H492 121 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 NXT2Q9NPJ8 142 aaKnown RBP6.22□□□□□ -1.41
TDP1-208ENST00000553989 SCRT2Q9NQ03 307 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 DNAH2Q9P225 4427 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 FAT2Q9NYQ8 4349 aa6.22□□□□□ -1.41
TDP1-208ENST00000553989 TRAV12-2A0A075B6T6 113 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 PRSS47A8MTI9 375 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 D6R8Y8 96 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 ATP5G1P05496 136 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 IFI27P40305 119 aaPredicted RBP6.21□□□□□ -1.42
TDP1-208ENST00000553989 ZNF138P52744 262 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 SEC11AP67812 179 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 MAJINQ3KP22 176 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 AMTNQ6UX39 209 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 RNF182Q8N6D2 247 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 LINC01587Q99440 93 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 NACAE9PAV3 2078 aa6.21□□□□□ -1.42
TDP1-208ENST00000553989 RYR1P21817 5038 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 NPSP0C0P6 89 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 FCER1GP30273 86 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 BVES-AS1Q5T3Y7 98 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 TMEM78Q5T7P6 136 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 C9orf47Q6ZRZ4 202 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 LINC00173Q6ZV60 143 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 IFI27L1Q96BM0 104 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 LINC00477Q96M19 166 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 VGLL1Q99990 258 aa6.2□□□□□ -1.42
TDP1-208ENST00000553989 IGKV2-40A0A087WW87 121 aaPredicted RBP6.19□□□□□ -1.42
TDP1-208ENST00000553989 TMSB15BA0A087X1C1 80 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 TRBV7-9A0A0J9YWB2 115 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 LOC389332A0A1B0GUA5 103 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 hDV102S1A0JD36 115 aa6.19□□□□□ -1.42
TDP1-208ENST00000553989 A6NDN8 102 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms