RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 CIDEAO60543 219 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 PLA2G1BP04054 148 aaKnown RBP6.65□□□□□ -1.34
ACTN1-210ENST00000553779 ARL14EPLP0DKL9 152 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 S100A4P26447 101 aaKnown RBP6.65□□□□□ -1.34
ACTN1-210ENST00000553779 CDC34P49427 236 aaPredicted RBP6.65□□□□□ -1.34
ACTN1-210ENST00000553779 FHITP49789 147 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 RPL19P84098 196 aaKnown RBP6.65□□□□□ -1.34
ACTN1-210ENST00000553779 LELP1Q5T871 98 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 SLC25A29Q8N8R3 303 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 OR10G9Q8NGN4 311 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 OR10G7Q8NGN6 311 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 ATP6V0E2Q8NHE4 81 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 PRO1933Q9H354 126 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 URGCP-MRPS24S4R325 110 aa6.65□□□□□ -1.34
ACTN1-210ENST00000553779 XKRY2A2RUG3 117 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 MAP1LC3B2A6NCE7 125 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 MGST1P10620 155 aaKnown RBP6.64□□□□□ -1.35
ACTN1-210ENST00000553779 CCL20P78556 96 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 CFAP126Q5VTH2 177 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 PRNTQ86SH4 94 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 C5orf17Q8NAS9 161 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 MAP1LC3BQ9GZQ8 125 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 MANBALQ9NQG1 85 aa6.64□□□□□ -1.35
ACTN1-210ENST00000553779 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.63□□□□□ -1.35
ACTN1-210ENST00000553779 TRAV8-3A0A0A6YYJ7 113 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 TRBV6-4A0A1B0GX49 114 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 LRCOL1A6NCL2 159 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 GGTLC3B5MD39 225 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 LECT2O14960 151 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 RS1O15537 224 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 LAGE3Q14657 143 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 OR2D3Q8NGH3 330 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 RMI2Q96E14 147 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 MIEN1Q9BRT3 115 aa6.63□□□□□ -1.35
ACTN1-210ENST00000553779 GAGE12JA6NER3 117 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 ESDP10768 282 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 GAGE4Q13068 117 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 GAGE5Q13069 117 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 COX19Q49B96 90 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 GAGE13Q4V321 117 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 TMEM75Q8N9X5 138 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 SNHG12Q9BXW3 62 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 PSG8Q9UQ74 426 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 FAT1Q14517 4588 aa6.62□□□□□ -1.35
ACTN1-210ENST00000553779 TCRAP04437 139 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 ZNF25P17030 456 aaPredicted RBP6.61□□□□□ -1.35
ACTN1-210ENST00000553779 GCHFRP30047 84 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 ASIPP42127 132 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 MEF2BQ02080 365 aaPredicted RBP6.61□□□□□ -1.35
ACTN1-210ENST00000553779 SAPCD1Q5SSQ6 148 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 COL5A1-AS1Q5SY13 56 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 SMIM7Q9BQ49 75 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 TMEM167BQ9NRX6 74 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 GNG13Q9P2W3 67 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 COX11Q9Y6N1 276 aa6.61□□□□□ -1.35
ACTN1-210ENST00000553779 PGPEP1LA6NFU8 196 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 A8MWV9 139 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 PDE6DO43924 150 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 SCGB1D1O95968 90 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 CXorf1O96002 111 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
ACTN1-210ENST00000553779 CEBPGP53567 150 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 PDZD11Q5EBL8 140 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 FAM74A4Q5TZK3 123 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 SYT8Q8NBV8 401 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 C9orf85Q96MD7 179 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 ZFP30Q9Y2G7 519 aa6.6□□□□□ -1.35
ACTN1-210ENST00000553779 IGKV2D-24A0A075B6R9 120 aa6.59□□□□□ -1.35
ACTN1-210ENST00000553779 H3BVH4 76 aa6.59□□□□□ -1.35
ACTN1-210ENST00000553779 PCP4P48539 62 aa6.59□□□□□ -1.35
ACTN1-210ENST00000553779 FGF8P55075 233 aaPredicted RBP6.59□□□□□ -1.35
ACTN1-210ENST00000553779 RPS20P60866 119 aaKnown RBP6.59□□□□□ -1.35
ACTN1-210ENST00000553779 SUMO1P63165 101 aaKnown RBP6.59□□□□□ -1.35
ACTN1-210ENST00000553779 PARLQ9H300 379 aa6.59□□□□□ -1.35
ACTN1-210ENST00000553779 C11orf21Q9P2W6 132 aa6.59□□□□□ -1.35
ACTN1-210ENST00000553779 A0A087WX48 190 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 CTXND1A0A1B0GTU2 59 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 RHODO00212 210 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 STAG3L2P0CL84 134 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 STAG3L3P0CL85 134 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 RPL23P62829 140 aaKnown RBP6.58□□□□□ -1.36
ACTN1-210ENST00000553779 COTL1Q14019 142 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 PET117Q6UWS5 81 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 ZFP2Q6ZN57 461 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 TEX43Q6ZNM6 134 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 DAZ4Q86SG3 579 aaKnown RBP6.58□□□□□ -1.36
ACTN1-210ENST00000553779 Q8N3U1 123 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 DEFB104AQ8WTQ1 72 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 ORAOV1Q8WV07 137 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 BAALCQ8WXS3 180 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 DAZ3Q9NR90 486 aaKnown RBP6.58□□□□□ -1.36
ACTN1-210ENST00000553779 FAM30AQ9NZY2 134 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 EPDR1Q9UM22 224 aa6.58□□□□□ -1.36
ACTN1-210ENST00000553779 TRAV34A0A0B4J273 112 aa6.57□□□□□ -1.36
ACTN1-210ENST00000553779 C20orf202A1L168 122 aa6.57□□□□□ -1.36
ACTN1-210ENST00000553779 RNASE3P12724 160 aaKnown RBP6.57□□□□□ -1.36
ACTN1-210ENST00000553779 UBE2G2P60604 165 aa6.57□□□□□ -1.36
ACTN1-210ENST00000553779 Q0VG73 95 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms