RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 PHLDA1Q8WV24 401 aaPredicted RBP6.87□□□□□ -1.31
CHD8-204ENST00000553622 PRO0255Q9UI72 69 aa6.87□□□□□ -1.31
CHD8-204ENST00000553622 TNFRSF18Q9Y5U5 241 aa6.87□□□□□ -1.31
CHD8-204ENST00000553622 PRKDCP78527 4128 aaKnown RBP6.86□□□□□ -1.31
CHD8-204ENST00000553622 FBN3Q75N90 2809 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 LOC389332A0A1B0GUA5 103 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 TRBV6-4A0A1B0GX49 114 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 C1orf196B1AJZ1 125 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 TNFRSF6BO95407 300 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 RPL36AP83881 106 aaKnown RBP6.86□□□□□ -1.31
CHD8-204ENST00000553622 ZNRF2Q8NHG8 242 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 RPL36ALQ969Q0 106 aaKnown RBP6.86□□□□□ -1.31
CHD8-204ENST00000553622 ST20Q9HBF5 79 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 NIT2Q9NQR4 276 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 Q9UF83 564 aa6.86□□□□□ -1.31
CHD8-204ENST00000553622 A0A096LPF7 62 aa6.85□□□□□ -1.31
CHD8-204ENST00000553622 NUDT3O95989 172 aa6.85□□□□□ -1.31
CHD8-204ENST00000553622 PPP1R17O96001 155 aa6.85□□□□□ -1.31
CHD8-204ENST00000553622 NRACQ8N912 160 aa6.85□□□□□ -1.31
CHD8-204ENST00000553622 NEXN-AS1Q8NBZ9 246 aa6.85□□□□□ -1.31
CHD8-204ENST00000553622 DEFB104AQ8WTQ1 72 aa6.85□□□□□ -1.31
CHD8-204ENST00000553622 ALKBH7Q9BT30 221 aaPredicted RBP6.85□□□□□ -1.31
CHD8-204ENST00000553622 MAP1LC3AQ9H492 121 aa6.85□□□□□ -1.31
CHD8-204ENST00000553622 HUWE1Q7Z6Z7 4374 aaKnown RBP6.85□□□□□ -1.31
CHD8-204ENST00000553622 TGP01266 2768 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 TRBV7-3A0A075B6L6 115 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 IGHV3-38A0A0C4DH36 116 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 TRBV10-1A0A0K0K1A3 114 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 IGLL5B9A064 214 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 IQCJQ1A5X6 159 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 NEGR1Q7Z3B1 354 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 VSIG2Q96IQ7 327 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 DNAJC30Q96LL9 226 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 ICOSQ9Y6W8 199 aa6.84□□□□□ -1.31
CHD8-204ENST00000553622 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.32
CHD8-204ENST00000553622 SDHAF1A6NFY7 115 aa6.83□□□□□ -1.32
CHD8-204ENST00000553622 PMCHP20382 165 aa6.83□□□□□ -1.32
CHD8-204ENST00000553622 SUMO2P61956 95 aaKnown RBP6.83□□□□□ -1.32
CHD8-204ENST00000553622 ZFAND6Q6FIF0 208 aa6.83□□□□□ -1.32
CHD8-204ENST00000553622 PRSS3P2Q8NHM4 247 aa6.83□□□□□ -1.32
CHD8-204ENST00000553622 LAMTOR2Q9Y2Q5 125 aa6.83□□□□□ -1.32
CHD8-204ENST00000553622 NUPR2A6NF83 97 aa6.82□□□□□ -1.32
CHD8-204ENST00000553622 PHOX2AO14813 284 aa6.82□□□□□ -1.32
CHD8-204ENST00000553622 RAB5BP61020 215 aa6.82□□□□□ -1.32
CHD8-204ENST00000553622 MRPL23Q16540 153 aaKnown RBP6.82□□□□□ -1.32
CHD8-204ENST00000553622 RNASEKQ6P5S7 137 aaKnown RBP6.82□□□□□ -1.32
CHD8-204ENST00000553622 BAGE3Q86Y29 109 aa6.82□□□□□ -1.32
CHD8-204ENST00000553622 ATP6V0E2Q8NHE4 81 aa6.82□□□□□ -1.32
CHD8-204ENST00000553622 C18orf32Q8TCD1 76 aa6.82□□□□□ -1.32
CHD8-204ENST00000553622 C20orf78Q9BR46 151 aa6.82□□□□□ -1.32
CHD8-204ENST00000553622 SMIM2Q9BVW6 85 aa6.82□□□□□ -1.32
CHD8-204ENST00000553622 TRBV6-5A0A0K0K1A5 114 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 VCYO14598 125 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BKO60814 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BJP06899 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BOP23527 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 FCER1GP30273 86 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BBP33778 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 IFI27P40305 119 aaPredicted RBP6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BDP58876 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 UBE2D3P61077 147 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BCP62807 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 UBE2D2P62837 147 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST2H2BEQ16778 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.81□□□□□ -1.32
CHD8-204ENST00000553622 CEMP1Q6PRD7 247 aaPredicted RBP6.81□□□□□ -1.32
CHD8-204ENST00000553622 FA2HQ7L5A8 372 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BHQ93079 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 WWC2-AS2Q96NR7 200 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BNQ99877 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 HIST1H2BMQ99879 126 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 TMEM70Q9BUB7 260 aa6.81□□□□□ -1.32
CHD8-204ENST00000553622 TMA7Q9Y2S6 64 aaKnown RBP6.81□□□□□ -1.32
CHD8-204ENST00000553622 KLK5Q9Y337 293 aaPredicted RBP6.81□□□□□ -1.32
CHD8-204ENST00000553622 H3BNG1 76 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 I3L3M4 83 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 TCAPO15273 167 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 NDUFA6P56556 154 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 COTL1Q14019 142 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 DAZ4Q86SG3 579 aaKnown RBP6.8□□□□□ -1.32
CHD8-204ENST00000553622 Q8N8P6 123 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 C15orf53Q8NAA6 179 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 MUC7Q8TAX7 377 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 KIR2DL4Q99706 377 aa6.8□□□□□ -1.32
CHD8-204ENST00000553622 NXT2Q9NPJ8 142 aaKnown RBP6.8□□□□□ -1.32
CHD8-204ENST00000553622 DAZ3Q9NR90 486 aaKnown RBP6.8□□□□□ -1.32
CHD8-204ENST00000553622 LINC00694P0DN24 101 aa6.79□□□□□ -1.32
CHD8-204ENST00000553622 POLR2KP53803 58 aaKnown RBP6.79□□□□□ -1.32
CHD8-204ENST00000553622 SH2D6Q7Z4S9 175 aa6.79□□□□□ -1.32
CHD8-204ENST00000553622 TRBV27A0A0K0K1C4 114 aa6.78□□□□□ -1.32
CHD8-204ENST00000553622 TSHBP01222 138 aa6.78□□□□□ -1.32
CHD8-204ENST00000553622 AMTP48728 403 aa6.78□□□□□ -1.32
CHD8-204ENST00000553622 Q0VG73 95 aa6.78□□□□□ -1.32
CHD8-204ENST00000553622 NIT1Q86X76 327 aa6.78□□□□□ -1.32
CHD8-204ENST00000553622 GTSF1LQ9H1H1 148 aa6.78□□□□□ -1.32
CHD8-204ENST00000553622 SERF1AO75920 110 aa6.77□□□□□ -1.33
CHD8-204ENST00000553622 S100A6P06703 90 aa6.77□□□□□ -1.33
CHD8-204ENST00000553622 LINC00614P0C842 121 aa6.77□□□□□ -1.33
CHD8-204ENST00000553622 RPL32P62910 135 aaKnown RBP6.77□□□□□ -1.33
CHD8-204ENST00000553622 LAGE3Q14657 143 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms