RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 X6R8D5 127 aa4.39□□□□□ -1.71
VIPAS39-204ENST00000553576 CUBNO60494 3623 aa4.39□□□□□ -1.71
VIPAS39-204ENST00000553576 HELZ2Q9BYK8 2649 aaKnown RBP4.39□□□□□ -1.71
VIPAS39-204ENST00000553576 ACANP16112 2415 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 A0A087WX48 190 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 CBY3A6NI87 242 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 A8MWV9 139 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 M0R2P5 195 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 NUDT3O95989 172 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 IGLV1-51P01701 117 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 IGKCP01834 107 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 MGPP08493 103 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 FGF6P10767 208 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 RIPPLY3P57055 190 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 ZNF876PQ49A33 203 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 COL5A1-AS1Q5SY13 56 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 TRPT1Q86TN4 253 aaKnown RBP4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 NDUFA11Q86Y39 141 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 BOD1L2Q8IYS8 172 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 CSTL1Q9H114 145 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 DKK2Q9UBU2 259 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 CCDC168Q8NDH2 2452 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 MYO9AB2RTY4 2548 aa4.38□□□□□ -1.71
VIPAS39-204ENST00000553576 A0A1B0GV90 55 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 SDHAF1A6NFY7 115 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 IGIPA6NJ69 53 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 OR11H12B2RN74 326 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 H0Y8G0 127 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 H7C1H1 209 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 DPM2O94777 84 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 INSP01308 110 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 ZNF415Q09FC8 603 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 RHOHQ15669 191 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 MORN3Q6PF18 240 aaPredicted RBP4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 C2orf66Q6UXQ4 117 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 C12orf54Q6X4T0 127 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 ZFP2Q6ZN57 461 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 STHQ8IWL8 128 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 C11orf72Q8NBR9 251 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 NEXN-AS1Q8NBZ9 246 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 TMEM141Q96I45 108 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 C18orf15Q96N68 181 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 SCGB3A1Q96QR1 104 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 LINC01587Q99440 93 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 TIMM17AQ99595 171 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
VIPAS39-204ENST00000553576 A0A087WWL8 130 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 F5H697 171 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 F8VRH5 84 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 RHODO00212 210 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 NPSP0C0P6 89 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 PLNP26678 52 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 NSUN5P1Q3KNT7 163 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 C1orf158Q8N1D5 194 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 STPG4Q8N801 248 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 IL17DQ8TAD2 202 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 DNAJC30Q96LL9 226 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 SMR3AQ99954 134 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 CDIP1Q9H305 208 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 HIGD1BQ9P298 99 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 ZMAT5Q9UDW3 170 aaKnown RBP4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 CYSLTR1Q9Y271 337 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 NF1P21359 2839 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 HIVEP2P31629 2446 aa4.36□□□□□ -1.71
VIPAS39-204ENST00000553576 A0A1W2PRX2 142 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 I3L3M4 83 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 RS1O15537 224 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 CIDEAO60543 219 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 IGHV3-53P01767 116 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 GIG44P09565 113 aaPredicted RBP4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 P0DMU3 169 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 FAM231AP0DMU4 169 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 FAM231CP0DMU5 169 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 INSL3P51460 131 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 CRYBA4P53673 196 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 KRTAP10-3P60369 221 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 GAGE1Q13065 139 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 PAPPA-AS1Q5QFB9 102 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 CFAP126Q5VTH2 177 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 C2orf91Q6ZV80 131 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 C11orf44Q8N8P7 122 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 BAALCQ8WXS3 180 aa4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 MRPL35Q9NZE8 188 aaKnown RBP4.35□□□□□ -1.71
VIPAS39-204ENST00000553576 PRSS29PA6NIE9 313 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 SAP30O75446 220 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 TSHBP01222 138 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 HINT1P49773 126 aaPredicted RBP4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 PMVKQ15126 192 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 ZNF56Q15929 161 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 MPV17L2Q567V2 206 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 BVES-AS1Q5T3Y7 98 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 ZC2HC1BQ5TFG8 222 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 FAM74A4Q5TZK3 123 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 HIST2H2BDQ6DRA6 164 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 LINC00482Q8N8I6 264 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 C20orf203Q8NBC4 194 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
VIPAS39-204ENST00000553576 RNASE8Q8TDE3 154 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms