RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 IGHV3-53P01767 116 aa9.77□□□□□ -0.85
APEX1-205ENST00000553555 SMIM6P0DI80 62 aa9.77□□□□□ -0.85
APEX1-205ENST00000553555 DEFB130BP0DP73 79 aa9.77□□□□□ -0.85
APEX1-205ENST00000553555 DEFB130AP0DP74 79 aa9.77□□□□□ -0.85
APEX1-205ENST00000553555 RNASEKQ6P5S7 137 aaKnown RBP9.77□□□□□ -0.85
APEX1-205ENST00000553555 NIT1Q86X76 327 aa9.77□□□□□ -0.85
APEX1-205ENST00000553555 URB1-AS1Q96HZ7 61 aa9.77□□□□□ -0.85
APEX1-205ENST00000553555 SPATA25Q9BR10 227 aa9.77□□□□□ -0.85
APEX1-205ENST00000553555 LOC389332A0A1B0GUA5 103 aa9.76□□□□□ -0.85
APEX1-205ENST00000553555 MAP1LC3AQ9H492 121 aa9.76□□□□□ -0.85
APEX1-205ENST00000553555 PCP4L1A6NKN8 68 aa9.75□□□□□ -0.85
APEX1-205ENST00000553555 H7C1H1 209 aa9.75□□□□□ -0.85
APEX1-205ENST00000553555 SPART-AS1P0CW21 52 aa9.75□□□□□ -0.85
APEX1-205ENST00000553555 PMCHP20382 165 aa9.75□□□□□ -0.85
APEX1-205ENST00000553555 FAM19A2Q8N3H0 131 aa9.75□□□□□ -0.85
APEX1-205ENST00000553555 PRSS3P2Q8NHM4 247 aa9.75□□□□□ -0.85
APEX1-205ENST00000553555 C20orf78Q9BR46 151 aa9.75□□□□□ -0.85
APEX1-205ENST00000553555 CELA1Q9UNI1 258 aa9.75□□□□□ -0.85
APEX1-205ENST00000553555 TRBV6-5A0A0K0K1A5 114 aa9.74□□□□□ -0.85
APEX1-205ENST00000553555 LINC00614P0C842 121 aa9.74□□□□□ -0.85
APEX1-205ENST00000553555 ESDP10768 282 aa9.74□□□□□ -0.85
APEX1-205ENST00000553555 IFI27P40305 119 aaPredicted RBP9.74□□□□□ -0.85
APEX1-205ENST00000553555 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
APEX1-205ENST00000553555 NIT2Q9NQR4 276 aa9.74□□□□□ -0.85
APEX1-205ENST00000553555 DAD1P61803 113 aa9.74□□□□□ -0.85
APEX1-205ENST00000553555 SUMO2P61956 95 aaKnown RBP9.74□□□□□ -0.85
APEX1-205ENST00000553555 FHL2Q14192 279 aa9.74□□□□□ -0.85
APEX1-205ENST00000553555 ST20Q9HBF5 79 aa9.74□□□□□ -0.85
APEX1-205ENST00000553555 HUWE1Q7Z6Z7 4374 aaKnown RBP9.73□□□□□ -0.85
APEX1-205ENST00000553555 IGLV2-18A0A075B6J9 118 aa9.73□□□□□ -0.85
APEX1-205ENST00000553555 TEX48A0A1B0GUV7 120 aa9.73□□□□□ -0.85
APEX1-205ENST00000553555 HSBP1O75506 76 aa9.73□□□□□ -0.85
APEX1-205ENST00000553555 P0DMU3 169 aa9.73□□□□□ -0.85
APEX1-205ENST00000553555 FAM231AP0DMU4 169 aa9.73□□□□□ -0.85
APEX1-205ENST00000553555 FAM231CP0DMU5 169 aa9.73□□□□□ -0.85
APEX1-205ENST00000553555 AMTP48728 403 aa9.73□□□□□ -0.85
APEX1-205ENST00000553555 POLR2KP53803 58 aaKnown RBP9.73□□□□□ -0.85
APEX1-205ENST00000553555 Q8N8P6 123 aa9.73□□□□□ -0.85
APEX1-205ENST00000553555 CHCHD1Q96BP2 118 aaKnown RBP9.73□□□□□ -0.85
APEX1-205ENST00000553555 NXT2Q9NPJ8 142 aaKnown RBP9.73□□□□□ -0.85
APEX1-205ENST00000553555 DNAH9Q9NYC9 4486 aa9.72□□□□□ -0.85
APEX1-205ENST00000553555 TRGV4A0A0C4DH28 118 aa9.72□□□□□ -0.85
APEX1-205ENST00000553555 RPL32P62910 135 aaKnown RBP9.72□□□□□ -0.85
APEX1-205ENST00000553555 PYY3Q5JQD4 70 aa9.72□□□□□ -0.85
APEX1-205ENST00000553555 FA2HQ7L5A8 372 aa9.72□□□□□ -0.85
APEX1-205ENST00000553555 SMIM2Q9BVW6 85 aa9.72□□□□□ -0.85
APEX1-205ENST00000553555 Q9UF83 564 aa9.72□□□□□ -0.85
APEX1-205ENST00000553555 LINC01546A6NGU7 62 aa9.71□□□□□ -0.85
APEX1-205ENST00000553555 PMCHL1Q16048 86 aa9.71□□□□□ -0.85
APEX1-205ENST00000553555 SLC25A29Q8N8R3 303 aa9.71□□□□□ -0.85
APEX1-205ENST00000553555 NEXN-AS1Q8NBZ9 246 aa9.71□□□□□ -0.85
APEX1-205ENST00000553555 DNAJC30Q96LL9 226 aa9.71□□□□□ -0.85
APEX1-205ENST00000553555 B9D2Q9BPU9 175 aa9.71□□□□□ -0.85
APEX1-205ENST00000553555 TMEM70Q9BUB7 260 aa9.71□□□□□ -0.85
APEX1-205ENST00000553555 ZMAT4Q9H898 229 aa9.71□□□□□ -0.85
APEX1-205ENST00000553555 A0A0J9YWU9 116 aa9.71□□□□□ -0.86
APEX1-205ENST00000553555 TRBV6-4A0A1B0GX49 114 aa9.71□□□□□ -0.86
APEX1-205ENST00000553555 SDHAF1A6NFY7 115 aa9.71□□□□□ -0.86
APEX1-205ENST00000553555 K7EQD1 137 aa9.71□□□□□ -0.86
APEX1-205ENST00000553555 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
APEX1-205ENST00000553555 TNFRSF18Q9Y5U5 241 aa9.71□□□□□ -0.86
APEX1-205ENST00000553555 TRBV10-1A0A0K0K1A3 114 aa9.7□□□□□ -0.86
APEX1-205ENST00000553555 C12orf74Q32Q52 190 aa9.7□□□□□ -0.86
APEX1-205ENST00000553555 TRBV27A0A0K0K1C4 114 aa9.69□□□□□ -0.86
APEX1-205ENST00000553555 VCYO14598 125 aa9.69□□□□□ -0.86
APEX1-205ENST00000553555 SCGB1D1O95968 90 aa9.69□□□□□ -0.86
APEX1-205ENST00000553555 ATP5G1P05496 136 aa9.69□□□□□ -0.86
APEX1-205ENST00000553555 HHLA3Q9XRX5 114 aa9.69□□□□□ -0.86
APEX1-205ENST00000553555 KRTDAPP60985 99 aa9.68□□□□□ -0.86
APEX1-205ENST00000553555 CDPF1Q6NVV7 123 aa9.68□□□□□ -0.86
APEX1-205ENST00000553555 TCAPO15273 167 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 DEFA6Q01524 100 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 JOSD1Q15040 202 aaPredicted RBP9.67□□□□□ -0.86
APEX1-205ENST00000553555 RHOHQ15669 191 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 NEGR1Q7Z3B1 354 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 TRBV7-3A0A075B6L6 115 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 IGHV1-24A0A0C4DH33 117 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 K7EMI3 77 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 CRYBA4P53673 196 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 RPL36AP83881 106 aaKnown RBP9.67□□□□□ -0.86
APEX1-205ENST00000553555 LAGE3Q14657 143 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 RPL36ALQ969Q0 106 aaKnown RBP9.67□□□□□ -0.86
APEX1-205ENST00000553555 PRADC1Q9BSG0 188 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 PRO0255Q9UI72 69 aa9.67□□□□□ -0.86
APEX1-205ENST00000553555 I3L3M4 83 aa9.66□□□□□ -0.86
APEX1-205ENST00000553555 KIR2DL4Q99706 377 aa9.66□□□□□ -0.86
APEX1-205ENST00000553555 A0A096LNJ9 63 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 LOC100131303A0A0U1RQF7 123 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 GAGE12JA6NER3 117 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 F5H768 121 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 FCER1GP30273 86 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 UBE2D3P61077 147 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 UBE2D2P62837 147 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 GAGE1Q13065 139 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 GAGE4Q13068 117 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 GAGE5Q13069 117 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 GAGE13Q4V321 117 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 C11orf45Q8TAV5 145 aa9.65□□□□□ -0.86
APEX1-205ENST00000553555 ORMDL2Q53FV1 153 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms