RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 DEFB104AQ8WTQ1 72 aa8.33□□□□□ -1.08
RAB5C-208ENST00000551338 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
RAB5C-208ENST00000551338 KIR2DL4Q99706 377 aa8.33□□□□□ -1.08
RAB5C-208ENST00000551338 MRPL35Q9NZE8 188 aaKnown RBP8.33□□□□□ -1.08
RAB5C-208ENST00000551338 CYSLTR1Q9Y271 337 aa8.33□□□□□ -1.08
RAB5C-208ENST00000551338 TP53TG1Q9Y2A0 90 aa8.33□□□□□ -1.08
RAB5C-208ENST00000551338 MAP1AP78559 2803 aaPredicted RBP8.33□□□□□ -1.08
RAB5C-208ENST00000551338 IGHV3OR16-12A0A075B7B8 117 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 IGHV3-73A0A0B4J1V6 119 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 F8VRH5 84 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 H7C1H1 209 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 TSHBP01222 138 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 P0DMU3 169 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 FAM231AP0DMU4 169 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 FAM231CP0DMU5 169 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 RPL35AP18077 110 aaKnown RBP8.32□□□□□ -1.08
RAB5C-208ENST00000551338 TCTAP57738 103 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 RHOHQ15669 191 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 ERASQ7Z444 233 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 SPATA3Q8NHX4 192 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 RNASE8Q8TDE3 154 aaKnown RBP8.32□□□□□ -1.08
RAB5C-208ENST00000551338 TMEM208Q9BTX3 173 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 HHLA3Q9XRX5 114 aa8.32□□□□□ -1.08
RAB5C-208ENST00000551338 LINC01549A6NIU2 74 aa8.31□□□□□ -1.08
RAB5C-208ENST00000551338 RHODO00212 210 aa8.31□□□□□ -1.08
RAB5C-208ENST00000551338 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
RAB5C-208ENST00000551338 RPL39P62891 51 aaKnown RBP8.31□□□□□ -1.08
RAB5C-208ENST00000551338 BOD1L2Q8IYS8 172 aa8.31□□□□□ -1.08
RAB5C-208ENST00000551338 CHTOPQ9Y3Y2 248 aaKnown RBP8.31□□□□□ -1.08
RAB5C-208ENST00000551338 ITPR2Q14571 2701 aa8.31□□□□□ -1.08
RAB5C-208ENST00000551338 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 DLEU1O43261 78 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 G0S2P27469 103 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 ZC2HC1BQ5TFG8 222 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 Q6ZSN1 163 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 LURAP1LQ8IV03 231 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 TMEM263Q8WUH6 116 aaKnown RBP8.3□□□□□ -1.08
RAB5C-208ENST00000551338 TIMM17AQ99595 171 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 AKAP9Q99996 3911 aa8.3□□□□□ -1.08
RAB5C-208ENST00000551338 FN1P02751 2386 aaKnown RBP8.3□□□□□ -1.08
RAB5C-208ENST00000551338 PLAC8L1A1L4L8 177 aa8.29□□□□□ -1.08
RAB5C-208ENST00000551338 I3L3M4 83 aa8.29□□□□□ -1.08
RAB5C-208ENST00000551338 IGHV3-53P01767 116 aa8.29□□□□□ -1.08
RAB5C-208ENST00000551338 NMUP48645 174 aa8.29□□□□□ -1.08
RAB5C-208ENST00000551338 GTSCR1Q86UQ5 136 aa8.29□□□□□ -1.08
RAB5C-208ENST00000551338 PCP2Q8IVA1 136 aa8.29□□□□□ -1.08
RAB5C-208ENST00000551338 CSNK1G2-AS1Q8NCQ2 148 aa8.29□□□□□ -1.08
RAB5C-208ENST00000551338 CITED1Q99966 193 aa8.29□□□□□ -1.08
RAB5C-208ENST00000551338 PRSS29PA6NIE9 313 aa8.28□□□□□ -1.08
RAB5C-208ENST00000551338 PLNP26678 52 aa8.28□□□□□ -1.08
RAB5C-208ENST00000551338 MPV17L2Q567V2 206 aa8.28□□□□□ -1.08
RAB5C-208ENST00000551338 COL5A1-AS1Q5SY13 56 aa8.28□□□□□ -1.08
RAB5C-208ENST00000551338 C9orf66Q5T8R8 295 aa8.28□□□□□ -1.08
RAB5C-208ENST00000551338 TMEM141Q96I45 108 aa8.28□□□□□ -1.08
RAB5C-208ENST00000551338 C1QTNF4Q9BXJ3 329 aa8.28□□□□□ -1.08
RAB5C-208ENST00000551338 Q9UF83 564 aa8.28□□□□□ -1.08
RAB5C-208ENST00000551338 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
RAB5C-208ENST00000551338 BVES-AS1Q5T3Y7 98 aa8.27□□□□□ -1.09
RAB5C-208ENST00000551338 C20orf203Q8NBC4 194 aa8.27□□□□□ -1.09
RAB5C-208ENST00000551338 C16orf74Q96GX8 76 aa8.27□□□□□ -1.09
RAB5C-208ENST00000551338 DNAJC30Q96LL9 226 aa8.27□□□□□ -1.09
RAB5C-208ENST00000551338 TTTY13Q9BZ97 58 aa8.27□□□□□ -1.09
RAB5C-208ENST00000551338 MTORP42345 2549 aa8.27□□□□□ -1.09
RAB5C-208ENST00000551338 IGLV4-69A0A075B6H9 119 aa8.26□□□□□ -1.09
RAB5C-208ENST00000551338 INSL3P51460 131 aa8.26□□□□□ -1.09
RAB5C-208ENST00000551338 PMVKQ15126 192 aa8.26□□□□□ -1.09
RAB5C-208ENST00000551338 Q6ZTI0 123 aa8.26□□□□□ -1.09
RAB5C-208ENST00000551338 TNFRSF18Q9Y5U5 241 aa8.26□□□□□ -1.09
RAB5C-208ENST00000551338 GCN1Q92616 2671 aaKnown RBP8.25□□□□□ -1.09
RAB5C-208ENST00000551338 TRAV4A0A0B4J268 109 aa8.25□□□□□ -1.09
RAB5C-208ENST00000551338 SIVA1O15304 175 aa8.25□□□□□ -1.09
RAB5C-208ENST00000551338 DAZ2Q13117 558 aaKnown RBP8.25□□□□□ -1.09
RAB5C-208ENST00000551338 OR4C5Q8NGB2 326 aa8.25□□□□□ -1.09
RAB5C-208ENST00000551338 ZNF479Q96JC4 524 aa8.25□□□□□ -1.09
RAB5C-208ENST00000551338 CHCHD7Q9BUK0 85 aa8.25□□□□□ -1.09
RAB5C-208ENST00000551338 C11orf86A6NJI1 115 aa8.24□□□□□ -1.09
RAB5C-208ENST00000551338 C12orf54Q6X4T0 127 aa8.24□□□□□ -1.09
RAB5C-208ENST00000551338 OPRPNQ99935 248 aaPredicted RBP8.24□□□□□ -1.09
RAB5C-208ENST00000551338 OVOL2Q9BRP0 275 aa8.24□□□□□ -1.09
RAB5C-208ENST00000551338 CST9LQ9H4G1 147 aa8.24□□□□□ -1.09
RAB5C-208ENST00000551338 NOP10Q9NPE3 64 aaKnown RBP8.24□□□□□ -1.09
RAB5C-208ENST00000551338 IGLV4-3A0A075B6K6 122 aa8.23□□□□□ -1.09
RAB5C-208ENST00000551338 HSD52Q0P140 79 aa8.23□□□□□ -1.09
RAB5C-208ENST00000551338 RRN3P1Q2M238 152 aa8.23□□□□□ -1.09
RAB5C-208ENST00000551338 TMEM97Q5BJF2 176 aa8.23□□□□□ -1.09
RAB5C-208ENST00000551338 MAPKAPK5-AS1Q8N8E1 139 aa8.23□□□□□ -1.09
RAB5C-208ENST00000551338 HIGD1BQ9P298 99 aa8.23□□□□□ -1.09
RAB5C-208ENST00000551338 HECTD1Q9ULT8 2610 aa8.23□□□□□ -1.09
RAB5C-208ENST00000551338 CUBNO60494 3623 aa8.22□□□□□ -1.09
RAB5C-208ENST00000551338 IGHV3-38A0A0C4DH36 116 aa8.22□□□□□ -1.09
RAB5C-208ENST00000551338 E9PLD3 99 aa8.22□□□□□ -1.09
RAB5C-208ENST00000551338 K7EQD1 137 aa8.22□□□□□ -1.09
RAB5C-208ENST00000551338 EMP1P54849 157 aa8.22□□□□□ -1.09
RAB5C-208ENST00000551338 PAPPA-AS1Q5QFB9 102 aa8.22□□□□□ -1.09
RAB5C-208ENST00000551338 PHLDA1Q8WV24 401 aaPredicted RBP8.22□□□□□ -1.09
RAB5C-208ENST00000551338 FAM104AQ969W3 186 aa8.22□□□□□ -1.09
RAB5C-208ENST00000551338 PYGO1Q9Y3Y4 419 aa8.22□□□□□ -1.09
RAB5C-208ENST00000551338 GAGE12BA1L429 117 aa8.21□□□□□ -1.1
RAB5C-208ENST00000551338 GAGE7O76087 117 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms