RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 TRGC1P0CF51 173 aa9.1□□□□□ -0.95
CDX2-202ENST00000548877 CRYBA4P53673 196 aa9.1□□□□□ -0.95
CDX2-202ENST00000548877 FABP9Q0Z7S8 132 aa9.1□□□□□ -0.95
CDX2-202ENST00000548877 NEGR1Q7Z3B1 354 aa9.1□□□□□ -0.95
CDX2-202ENST00000548877 SYT8Q8NBV8 401 aa9.1□□□□□ -0.95
CDX2-202ENST00000548877 NUP35Q8NFH5 326 aa9.1□□□□□ -0.95
CDX2-202ENST00000548877 DEFB104AQ8WTQ1 72 aa9.1□□□□□ -0.95
CDX2-202ENST00000548877 TRGV1A0A0A0MS02 117 aa9.09□□□□□ -0.95
CDX2-202ENST00000548877 SH2D1AO60880 128 aa9.09□□□□□ -0.95
CDX2-202ENST00000548877 EVI2AP22794 236 aa9.09□□□□□ -0.95
CDX2-202ENST00000548877 HBBP68871 147 aa9.09□□□□□ -0.95
CDX2-202ENST00000548877 RIGQ13278 110 aa9.09□□□□□ -0.95
CDX2-202ENST00000548877 C8orf49Q96NF6 230 aa9.09□□□□□ -0.95
CDX2-202ENST00000548877 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
CDX2-202ENST00000548877 FAM30AQ9NZY2 134 aa9.09□□□□□ -0.95
CDX2-202ENST00000548877 KLLNB2CW77 178 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 NDUFA6P56556 154 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 RAB4BP61018 213 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 SNRPEP62304 92 aaKnown RBP9.08□□□□□ -0.96
CDX2-202ENST00000548877 FHL2Q14192 279 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 MRPL54Q6P161 138 aaKnown RBP9.08□□□□□ -0.96
CDX2-202ENST00000548877 C10orf126Q8N4M7 172 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 Q8TAT8 98 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 FAM19A4Q96LR4 140 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 MRPL18Q9H0U6 180 aaKnown RBP9.08□□□□□ -0.96
CDX2-202ENST00000548877 HHLA3Q9XRX5 114 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 FAT3Q8TDW7 4589 aa9.08□□□□□ -0.96
CDX2-202ENST00000548877 A0A1B0GUT8 65 aa9.07□□□□□ -0.96
CDX2-202ENST00000548877 C7orf71A4D174 169 aa9.07□□□□□ -0.96
CDX2-202ENST00000548877 CRIP1P50238 77 aa9.07□□□□□ -0.96
CDX2-202ENST00000548877 ERCC8Q13216 396 aa9.07□□□□□ -0.96
CDX2-202ENST00000548877 LINC01559Q495D7 138 aa9.07□□□□□ -0.96
CDX2-202ENST00000548877 COA6Q5JTJ3 125 aaKnown RBP9.07□□□□□ -0.96
CDX2-202ENST00000548877 TMEM136Q6ZRR5 245 aa9.07□□□□□ -0.96
CDX2-202ENST00000548877 Q6ZSA8 131 aa9.07□□□□□ -0.96
CDX2-202ENST00000548877 WFDC10BQ8IUB3 73 aa9.07□□□□□ -0.96
CDX2-202ENST00000548877 A0A1B0GXF2 115 aa9.06□□□□□ -0.96
CDX2-202ENST00000548877 F2Z2F3 143 aa9.06□□□□□ -0.96
CDX2-202ENST00000548877 J3KRW8 73 aa9.06□□□□□ -0.96
CDX2-202ENST00000548877 APCSP02743 223 aa9.06□□□□□ -0.96
CDX2-202ENST00000548877 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
CDX2-202ENST00000548877 TRAV21A0A0B4J279 112 aa9.05□□□□□ -0.96
CDX2-202ENST00000548877 K7EQD1 137 aa9.05□□□□□ -0.96
CDX2-202ENST00000548877 ORM1P02763 201 aa9.05□□□□□ -0.96
CDX2-202ENST00000548877 CRISP2P16562 243 aa9.05□□□□□ -0.96
CDX2-202ENST00000548877 S100A2P29034 98 aa9.05□□□□□ -0.96
CDX2-202ENST00000548877 Q8N814 137 aa9.05□□□□□ -0.96
CDX2-202ENST00000548877 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
CDX2-202ENST00000548877 OXTP01178 125 aa9.04□□□□□ -0.96
CDX2-202ENST00000548877 CRYGDP07320 174 aa9.04□□□□□ -0.96
CDX2-202ENST00000548877 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
CDX2-202ENST00000548877 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
CDX2-202ENST00000548877 FER1L6-AS1Q8NA97 138 aa9.04□□□□□ -0.96
CDX2-202ENST00000548877 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
CDX2-202ENST00000548877 GPX1P07203 203 aa9.03□□□□□ -0.96
CDX2-202ENST00000548877 SRIP30626 198 aa9.03□□□□□ -0.96
CDX2-202ENST00000548877 CTRLP40313 264 aa9.03□□□□□ -0.96
CDX2-202ENST00000548877 AKR1D1P51857 326 aa9.03□□□□□ -0.96
CDX2-202ENST00000548877 Q0VG73 95 aa9.03□□□□□ -0.96
CDX2-202ENST00000548877 OR10J3Q5JRS4 329 aa9.03□□□□□ -0.96
CDX2-202ENST00000548877 IBA57-AS1B1ANH7 110 aa9.02□□□□□ -0.97
CDX2-202ENST00000548877 CAMPP49913 170 aa9.02□□□□□ -0.97
CDX2-202ENST00000548877 ZNF80P51504 273 aaPredicted RBP9.02□□□□□ -0.97
CDX2-202ENST00000548877 TIRAPP58753 221 aa9.02□□□□□ -0.97
CDX2-202ENST00000548877 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.97
CDX2-202ENST00000548877 GATD1Q8NB37 220 aa9.02□□□□□ -0.97
CDX2-202ENST00000548877 MRPL16Q9NX20 251 aaKnown RBP9.02□□□□□ -0.97
CDX2-202ENST00000548877 PLA2G2DQ9UNK4 145 aa9.02□□□□□ -0.97
CDX2-202ENST00000548877 PSCAO43653 123 aa9.01□□□□□ -0.97
CDX2-202ENST00000548877 GZMBP10144 247 aa9.01□□□□□ -0.97
CDX2-202ENST00000548877 DMRTA1Q5VZB9 504 aa9.01□□□□□ -0.97
CDX2-202ENST00000548877 ZFAND2AQ8N6M9 145 aa9.01□□□□□ -0.97
CDX2-202ENST00000548877 TPPP3Q9BW30 176 aa9.01□□□□□ -0.97
CDX2-202ENST00000548877 TP53TG3Q9ULZ0 132 aa9.01□□□□□ -0.97
CDX2-202ENST00000548877 IGHV1OR15-1A0A075B7D0 117 aa9□□□□□ -0.97
CDX2-202ENST00000548877 TMSB15BA0A087X1C1 80 aa9□□□□□ -0.97
CDX2-202ENST00000548877 TRGV4A0A0C4DH28 118 aa9□□□□□ -0.97
CDX2-202ENST00000548877 IGLC6P0CF74 106 aa9□□□□□ -0.97
CDX2-202ENST00000548877 GYPEP15421 78 aa9□□□□□ -0.97
CDX2-202ENST00000548877 RNASE4P34096 147 aaKnown RBP9□□□□□ -0.97
CDX2-202ENST00000548877 CACNG7P62955 275 aa9□□□□□ -0.97
CDX2-202ENST00000548877 LINC01556Q5JQF7 62 aa9□□□□□ -0.97
CDX2-202ENST00000548877 LYZL1Q6UWQ5 148 aa9□□□□□ -0.97
CDX2-202ENST00000548877 SMIM15Q7Z3B0 74 aa9□□□□□ -0.97
CDX2-202ENST00000548877 BAGE3Q86Y29 109 aa9□□□□□ -0.97
CDX2-202ENST00000548877 HIST3H2BBQ8N257 126 aa9□□□□□ -0.97
CDX2-202ENST00000548877 TMEM18Q96B42 140 aa9□□□□□ -0.97
CDX2-202ENST00000548877 KCNS1Q96KK3 526 aa9□□□□□ -0.97
CDX2-202ENST00000548877 CNFNQ9BYD5 112 aa9□□□□□ -0.97
CDX2-202ENST00000548877 PKHD1L1Q86WI1 4243 aa8.99□□□□□ -0.97
CDX2-202ENST00000548877 IGHV3-38A0A0C4DH36 116 aa8.99□□□□□ -0.97
CDX2-202ENST00000548877 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
CDX2-202ENST00000548877 ARMS2P0C7Q2 107 aa8.99□□□□□ -0.97
CDX2-202ENST00000548877 SH2D6Q7Z4S9 175 aa8.99□□□□□ -0.97
CDX2-202ENST00000548877 RASL10AQ92737 203 aa8.99□□□□□ -0.97
CDX2-202ENST00000548877 SMIM6P0DI80 62 aa8.98□□□□□ -0.97
CDX2-202ENST00000548877 ESDP10768 282 aa8.98□□□□□ -0.97
CDX2-202ENST00000548877 PRR9Q5T870 116 aa8.98□□□□□ -0.97
CDX2-202ENST00000548877 ZNF479Q96JC4 524 aa8.98□□□□□ -0.97
CDX2-202ENST00000548877 PACRGQ96M98 296 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms