RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PARVBQ9HBI1 364 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 MRPL40Q9NQ50 206 aaKnown RBP0.1□□□□□ -2.39
CCDC38-206ENST00000548771 OPTCQ9UBM4 332 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 OR52A1Q9UKL2 312 aa0.1□□□□□ -2.39
CCDC38-206ENST00000548771 MYO5AQ9Y4I1 1855 aaKnown RBP0.1□□□□□ -2.39
CCDC38-206ENST00000548771 MYH3P11055 1940 aa0.09□□□□□ -2.39
CCDC38-206ENST00000548771 MYH1P12882 1939 aa0.09□□□□□ -2.39
CCDC38-206ENST00000548771 GGCTO75223 188 aaKnown RBP0.09□□□□□ -2.4
CCDC38-206ENST00000548771 IFNA7P01567 189 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 MT2AP02795 61 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 HMGA1P17096 107 aaKnown RBP0.09□□□□□ -2.4
CCDC38-206ENST00000548771 FXYD6P3P58550 94 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 MYL6P60660 151 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 DEFB133Q30KQ1 61 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 DEFB121Q5J5C9 76 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 OR10AG1Q8NH19 301 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 OR4K15Q8NH41 348 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 POP5Q969H6 163 aaKnown RBP0.09□□□□□ -2.4
CCDC38-206ENST00000548771 CCL19Q99731 98 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 RNF11Q9Y3C5 154 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 FAM32AQ9Y421 112 aaKnown RBP0.09□□□□□ -2.4
CCDC38-206ENST00000548771 MYH4Q9Y623 1939 aa0.09□□□□□ -2.4
CCDC38-206ENST00000548771 A0A087WSZ3 146 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 ZNF727A8MUV8 499 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 TMEM256-PLSCR3K7ERE1 68 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 CDKN2CP42773 168 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 RAB5CP51148 216 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 LIN52Q52LA3 116 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 S100A7AQ86SG5 101 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 OR5AS1Q8N127 324 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 WFDC9Q8NEX5 89 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 OR5D16Q8NGK9 328 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 CCL4L1Q8NHW4 92 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 TEX37Q96LM6 180 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 FAM103A1Q9BTL3 118 aaKnown RBP0.08□□□□□ -2.4
CCDC38-206ENST00000548771 DDA1Q9BW61 102 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 CCDC94Q9BW85 323 aaPredicted RBP0.08□□□□□ -2.4
CCDC38-206ENST00000548771 ENY2Q9NPA8 101 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 GINS2Q9Y248 185 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 ARL5AQ9Y689 179 aa0.08□□□□□ -2.4
CCDC38-206ENST00000548771 PLIN4Q96Q06 1357 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 MYH7P12883 1935 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 SPTBP11277 2137 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 DOCK4Q8N1I0 1966 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 A0A0G2JMM0 328 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 A0A1W2PPB8 328 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 A0A1W2PRS3 328 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 CLPSL1A2RUU4 121 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 ARL5CA6NH57 179 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 FAM159BA6NKW6 160 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 KIR3DP1A8MWS1 328 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 TMEM114B3SHH9 223 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 LYNX1G3V0Z9 82 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 HMGB3O15347 200 aaKnown RBP0.07□□□□□ -2.4
CCDC38-206ENST00000548771 MT1BP07438 61 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 CD14P08571 375 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 DYNLT3P51808 116 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 ARPP19P56211 112 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 FXYD4P59646 89 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 EIF3IQ13347 325 aaKnown RBP0.07□□□□□ -2.4
CCDC38-206ENST00000548771 C10orf99Q6UWK7 81 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 ZCCHC23Q6ZST2 131 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 GOLT1AQ6ZVE7 132 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 DEFB104AQ8WTQ1 72 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 CHCHD1Q96BP2 118 aaKnown RBP0.07□□□□□ -2.4
CCDC38-206ENST00000548771 ISOC1Q96CN7 298 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 ZNF714Q96N38 554 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 BPESC1Q9GZL8 116 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 PARVGQ9HBI0 331 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 HSPB8Q9UJY1 196 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 APLNQ9ULZ1 77 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 SLC22A13Q9Y226 551 aa0.07□□□□□ -2.4
CCDC38-206ENST00000548771 ROCK2O75116 1388 aaKnown RBP0.06□□□□□ -2.4
CCDC38-206ENST00000548771 DOCK11Q5JSL3 2073 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 TRAV27A0A087WT01 109 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 SPTY2D1-AS1A0A0U1RR47 76 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 APODP05090 189 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 CRYGSP22914 178 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 TAF1AQ15573 450 aaPredicted RBP0.06□□□□□ -2.4
CCDC38-206ENST00000548771 RGS21Q2M5E4 152 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 Q86TA4 180 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 DEFB108BQ8NET1 73 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 OR10X1Q8NGY0 326 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 MYH6P13533 1939 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 CCDC171Q6TFL3 1326 aa0.06□□□□□ -2.4
CCDC38-206ENST00000548771 ANKRD36A6QL64 1941 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 TANC2Q9HCD6 1990 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 A0A096LPI6 279 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 CXorf51AA0A1B0GTR3 108 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 A6NN06 94 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 BANF1O75531 89 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 IGLV1-51P01701 117 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 NFYBP25208 207 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 VBP1P61758 197 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 DEFB112Q30KQ8 113 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 SPINK6Q6UWN8 80 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 Q6ZQY7 126 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 ARPINQ7Z6K5 226 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 KRTAP8-1Q8IUC2 63 aa0.05□□□□□ -2.4
CCDC38-206ENST00000548771 IFT20Q8IY31 132 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms