RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PGLYRP1O75594 196 aaPredicted RBP1.97□□□□□ -2.09
PTCH1-216ENST00000548379 FABP1P07148 127 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 P0C880 135 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF705DP0CH99 300 aaPredicted RBP1.97□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF705BP0CI00 300 aaPredicted RBP1.97□□□□□ -2.09
PTCH1-216ENST00000548379 DEFB130BP0DP73 79 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 DEFB130AP0DP74 79 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 HLA-DRB4P13762 266 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 HRES1P13985 223 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 S100A7P31151 101 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 ATP5G3P48201 142 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 AKR1C2P52895 323 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 FXYD7P58549 80 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 HSPE1P61604 102 aaKnown RBP1.97□□□□□ -2.09
PTCH1-216ENST00000548379 PSG9Q00887 426 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 PRCDQ00LT1 54 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 GUK1Q16774 197 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 C1orf194Q5T5A4 169 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 ZNF705AQ6ZN79 300 aaPredicted RBP1.97□□□□□ -2.09
PTCH1-216ENST00000548379 TMEM91Q6ZNR0 172 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 FOXI2Q6ZQN5 318 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 OR4X1Q8NH49 305 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 DCANP1Q8TF63 244 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 TVP23CQ96ET8 276 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 DIRAS2Q96HU8 199 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 LINC00052Q96N35 136 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 FKBP14Q9NWM8 211 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 CACFD1Q9UGQ2 172 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 HLA-DRB4X5D2U9 266 aa1.97□□□□□ -2.09
PTCH1-216ENST00000548379 TRDV1A0A1B0GX56 115 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 A8MWP4 228 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 DISC1C4P0D8 188 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 GABARAPH6UMI1 98 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 PMP2P02689 132 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 SLC25A4P12235 298 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 OR10J1P30954 320 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 RPL5P46777 297 aaKnown RBP1.96□□□□□ -2.1
PTCH1-216ENST00000548379 TAS2R20P59543 309 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 KRTAP10-1P60331 282 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 YPEL3P61236 119 aaPredicted RBP1.96□□□□□ -2.1
PTCH1-216ENST00000548379 ACOT6Q3I5F7 207 aaPredicted RBP1.96□□□□□ -2.1
PTCH1-216ENST00000548379 SPINK9Q5DT21 86 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 Q5VSD8 79 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 S100A7AQ86SG5 101 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 C3orf22Q8N5N4 141 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 RBPMSQ93062 196 aaKnown RBP1.96□□□□□ -2.1
PTCH1-216ENST00000548379 GNPNAT1Q96EK6 184 aaPredicted RBP1.96□□□□□ -2.1
PTCH1-216ENST00000548379 S100A16Q96FQ6 103 aaKnown RBP1.96□□□□□ -2.1
PTCH1-216ENST00000548379 PBDC1Q9BVG4 233 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 RPRMQ9NS64 109 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 SSR3Q9UNL2 185 aa1.96□□□□□ -2.1
PTCH1-216ENST00000548379 LSM2Q9Y333 95 aaKnown RBP1.96□□□□□ -2.1
PTCH1-216ENST00000548379 MRPS16Q9Y3D3 137 aaKnown RBP1.96□□□□□ -2.1
PTCH1-216ENST00000548379 IGKV2-24A0A0C4DH68 120 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 SMIM31A0A1B0GVY4 71 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 MEIS3P1A6NDR6 274 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 CEBPZOSA8MTT3 80 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 SNRPGP15A8MWD9 76 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 M0R381 172 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 HTN1P15515 57 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 ETV6P41212 452 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 PMAIP1Q13794 54 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 TMEM97Q5BJF2 176 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 OR8I2Q8N0Y5 310 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 AP3S1Q92572 193 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 IGF2BP2-AS1Q96M15 143 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 KCNIP2Q9NS61 270 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 NDUFB11Q9NX14 153 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 DOK5Q9P104 306 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 LINC00588Q9Y4M8 146 aa1.95□□□□□ -2.1
PTCH1-216ENST00000548379 TIMM8BQ9Y5J9 83 aaPredicted RBP1.95□□□□□ -2.1
PTCH1-216ENST00000548379 KIAA1109Q2LD37 5005 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 PIGBOS1A0A0B4J2F0 54 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 A0A0J9YX75 114 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 A0A0J9YY99 117 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 C3orf85A0A1B0GTC6 90 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 A0A1B0GV50 99 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 TMEM238C9JI98 176 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 PSCAO43653 123 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 CFDP00746 253 aaPredicted RBP1.94□□□□□ -2.1
PTCH1-216ENST00000548379 IGLC1P0CG04 106 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 RHOBP62745 196 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 SUPT4H1P63272 117 aaKnown RBP1.94□□□□□ -2.1
PTCH1-216ENST00000548379 AMMECR1LQ6DCA0 310 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 PRRT1Q99946 306 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 UPK3BQ9BT76 320 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 SLC35B3Q9H1N7 401 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 DUSP21Q9H596 190 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 TXNL4BQ9NX01 149 aaKnown RBP1.94□□□□□ -2.1
PTCH1-216ENST00000548379 COPZ2Q9P299 210 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 PRELID1Q9Y255 219 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 PHLDA3Q9Y5J5 127 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 TRAPPC1Q9Y5R8 145 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 ICOSQ9Y6W8 199 aa1.94□□□□□ -2.1
PTCH1-216ENST00000548379 TRGV2A0A075B6R0 118 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 LINC00862A6NCI5 91 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 A6NED7 52 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 H3BNG1 76 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 H7BYZ3 331 aa1.93□□□□□ -2.1
PTCH1-216ENST00000548379 K7EP13 123 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms