RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 SYT8Q8NBV8 401 aa12.11□□□□□ -0.47
CHMP1A-204ENST00000547687 MRAPQ8TCY5 172 aa12.11□□□□□ -0.47
CHMP1A-204ENST00000547687 MUC4Q99102 2169 aa12.11□□□□□ -0.47
CHMP1A-204ENST00000547687 ATP5LO75964 103 aa12.11□□□□□ -0.47
CHMP1A-204ENST00000547687 NUDT3O95989 172 aa12.11□□□□□ -0.47
CHMP1A-204ENST00000547687 PRSS1P07477 247 aa12.11□□□□□ -0.47
CHMP1A-204ENST00000547687 A0A087WWL8 130 aa12.1□□□□□ -0.47
CHMP1A-204ENST00000547687 ODF3L2Q3SX64 289 aa12.1□□□□□ -0.47
CHMP1A-204ENST00000547687 DKK2Q9UBU2 259 aa12.1□□□□□ -0.47
CHMP1A-204ENST00000547687 TRGV11A0A075B6L2 103 aa12.1□□□□□ -0.47
CHMP1A-204ENST00000547687 ORMDL2Q53FV1 153 aa12.1□□□□□ -0.47
CHMP1A-204ENST00000547687 RBMY1BA6NDE4 496 aaKnown RBP12.09□□□□□ -0.47
CHMP1A-204ENST00000547687 RBMY1EA6NEQ0 496 aaKnown RBP12.09□□□□□ -0.47
CHMP1A-204ENST00000547687 CBY3A6NI87 242 aa12.09□□□□□ -0.47
CHMP1A-204ENST00000547687 RBMY1DP0C7P1 496 aaKnown RBP12.09□□□□□ -0.47
CHMP1A-204ENST00000547687 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
CHMP1A-204ENST00000547687 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
CHMP1A-204ENST00000547687 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
CHMP1A-204ENST00000547687 TP73-AS1Q9UF72 201 aa12.09□□□□□ -0.47
CHMP1A-204ENST00000547687 F5H697 171 aa12.08□□□□□ -0.48
CHMP1A-204ENST00000547687 K7EIL1 84 aa12.08□□□□□ -0.48
CHMP1A-204ENST00000547687 K7EMI3 77 aa12.08□□□□□ -0.48
CHMP1A-204ENST00000547687 K7EP13 123 aa12.08□□□□□ -0.48
CHMP1A-204ENST00000547687 SUMO4Q6EEV6 95 aa12.08□□□□□ -0.48
CHMP1A-204ENST00000547687 ODF1Q14990 250 aa12.08□□□□□ -0.48
CHMP1A-204ENST00000547687 STPG4Q8N801 248 aa12.08□□□□□ -0.48
CHMP1A-204ENST00000547687 CSTL1Q9H114 145 aa12.08□□□□□ -0.48
CHMP1A-204ENST00000547687 DNAH9Q9NYC9 4486 aa12.07□□□□□ -0.48
CHMP1A-204ENST00000547687 COX8AP10176 69 aa12.07□□□□□ -0.48
CHMP1A-204ENST00000547687 HINT1P49773 126 aaPredicted RBP12.06□□□□□ -0.48
CHMP1A-204ENST00000547687 COL5A1-AS1Q5SY13 56 aa12.06□□□□□ -0.48
CHMP1A-204ENST00000547687 FAM74A4Q5TZK3 123 aa12.06□□□□□ -0.48
CHMP1A-204ENST00000547687 RNASE8Q8TDE3 154 aaKnown RBP12.06□□□□□ -0.48
CHMP1A-204ENST00000547687 ZMAT4Q9H898 229 aa12.06□□□□□ -0.48
CHMP1A-204ENST00000547687 OR11H12B2RN74 326 aa12.06□□□□□ -0.48
CHMP1A-204ENST00000547687 HTN1P15515 57 aa12.06□□□□□ -0.48
CHMP1A-204ENST00000547687 EGFEM1PQ0D2K5 195 aa12.06□□□□□ -0.48
CHMP1A-204ENST00000547687 CRYGDP07320 174 aa12.05□□□□□ -0.48
CHMP1A-204ENST00000547687 RPL32P62910 135 aaKnown RBP12.05□□□□□ -0.48
CHMP1A-204ENST00000547687 ZNF876PQ49A33 203 aa12.05□□□□□ -0.48
CHMP1A-204ENST00000547687 DEFB121Q5J5C9 76 aa12.05□□□□□ -0.48
CHMP1A-204ENST00000547687 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
CHMP1A-204ENST00000547687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.04□□□□□ -0.48
CHMP1A-204ENST00000547687 SCGB3A1Q96QR1 104 aa12.04□□□□□ -0.48
CHMP1A-204ENST00000547687 IGKCP01834 107 aa12.03□□□□□ -0.48
CHMP1A-204ENST00000547687 POLR2KP53803 58 aaKnown RBP12.03□□□□□ -0.48
CHMP1A-204ENST00000547687 ZNF56Q15929 161 aa12.03□□□□□ -0.48
CHMP1A-204ENST00000547687 NEGR1Q7Z3B1 354 aa12.03□□□□□ -0.48
CHMP1A-204ENST00000547687 VCYO14598 125 aa12.03□□□□□ -0.48
CHMP1A-204ENST00000547687 DPM2O94777 84 aa12.02□□□□□ -0.49
CHMP1A-204ENST00000547687 TCTAP57738 103 aa12.02□□□□□ -0.49
CHMP1A-204ENST00000547687 C9orf66Q5T8R8 295 aa12.02□□□□□ -0.49
CHMP1A-204ENST00000547687 C2orf66Q6UXQ4 117 aa12.02□□□□□ -0.49
CHMP1A-204ENST00000547687 STHQ8IWL8 128 aa12.02□□□□□ -0.49
CHMP1A-204ENST00000547687 CLUHP3Q96NS8 147 aa12.02□□□□□ -0.49
CHMP1A-204ENST00000547687 HHLA3Q9XRX5 114 aa12.02□□□□□ -0.49
CHMP1A-204ENST00000547687 A0A087WX48 190 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 TRBV6-5A0A0K0K1A5 114 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 M0QY20 66 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 LINC01587Q99440 93 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 WFDC10AQ9H1F0 79 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 C19orf73Q9NVV2 129 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 TMEM238C9JI98 176 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 PRM2P04554 102 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 FGF6P10767 208 aa12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 CMC4P56277 68 aaPredicted RBP12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 MRPL35Q9NZE8 188 aaKnown RBP12.01□□□□□ -0.49
CHMP1A-204ENST00000547687 SDHAF1A6NFY7 115 aa12□□□□□ -0.49
CHMP1A-204ENST00000547687 INSP01308 110 aa12□□□□□ -0.49
CHMP1A-204ENST00000547687 INSL3P51460 131 aa12□□□□□ -0.49
CHMP1A-204ENST00000547687 MPV17L2Q567V2 206 aa12□□□□□ -0.49
CHMP1A-204ENST00000547687 KIR2DL4Q99706 377 aa12□□□□□ -0.49
CHMP1A-204ENST00000547687 TRAV12-1A0A0B4J245 112 aa11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 MORN3Q6PF18 240 aaPredicted RBP11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 TRPT1Q86TN4 253 aaKnown RBP11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 BOD1L2Q8IYS8 172 aa11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 FAM110AQ9BQ89 295 aa11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 LINC00467Q9BRT7 94 aa11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 NMUP48645 174 aa11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 ZNF415Q09FC8 603 aa11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 ZFP2Q6ZN57 461 aa11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 C2orf91Q6ZV80 131 aa11.99□□□□□ -0.49
CHMP1A-204ENST00000547687 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
CHMP1A-204ENST00000547687 H7C1H1 209 aa11.98□□□□□ -0.49
CHMP1A-204ENST00000547687 M0R2P5 195 aa11.98□□□□□ -0.49
CHMP1A-204ENST00000547687 ERASQ7Z444 233 aa11.98□□□□□ -0.49
CHMP1A-204ENST00000547687 NEXN-AS1Q8NBZ9 246 aa11.98□□□□□ -0.49
CHMP1A-204ENST00000547687 DEFB104AQ8WTQ1 72 aa11.98□□□□□ -0.49
CHMP1A-204ENST00000547687 CYSLTR1Q9Y271 337 aa11.98□□□□□ -0.49
CHMP1A-204ENST00000547687 XCL2Q9UBD3 114 aa11.97□□□□□ -0.49
CHMP1A-204ENST00000547687 LINC01549A6NIU2 74 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 PLNP26678 52 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 PIK3CD-AS1Q5SR53 167 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 BVES-AS1Q5T3Y7 98 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 ZC2HC1BQ5TFG8 222 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 GTSCR1Q86UQ5 136 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 PCP2Q8IVA1 136 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 BAALCQ8WXS3 180 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 PTH2Q96A98 100 aa11.96□□□□□ -0.49
CHMP1A-204ENST00000547687 A8MWV9 139 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms