RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 IGHV4-31P0DP07 118 aa10.74□□□□□ -0.69
LETMD1-209ENST00000547318 CFAP126Q5VTH2 177 aa10.74□□□□□ -0.69
LETMD1-209ENST00000547318 C10orf126Q8N4M7 172 aa10.74□□□□□ -0.69
LETMD1-209ENST00000547318 C4orf3Q8WVX3 66 aa10.74□□□□□ -0.69
LETMD1-209ENST00000547318 SPANXA1Q9NS26 97 aa10.74□□□□□ -0.69
LETMD1-209ENST00000547318 ZNF22P17026 224 aaPredicted RBP10.74□□□□□ -0.69
LETMD1-209ENST00000547318 SPATA25Q9BR10 227 aa10.74□□□□□ -0.69
LETMD1-209ENST00000547318 SELENOKQ9Y6D0 94 aa10.74□□□□□ -0.69
LETMD1-209ENST00000547318 AGRNO00468 2067 aa10.73□□□□□ -0.69
LETMD1-209ENST00000547318 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.73□□□□□ -0.69
LETMD1-209ENST00000547318 A0A0B4J2C4 111 aa10.73□□□□□ -0.69
LETMD1-209ENST00000547318 TSPEAR-AS2P59090 65 aa10.73□□□□□ -0.69
LETMD1-209ENST00000547318 TMEM86BQ8N661 226 aa10.73□□□□□ -0.69
LETMD1-209ENST00000547318 PRO1854Q9UHT4 67 aa10.73□□□□□ -0.69
LETMD1-209ENST00000547318 TNFRSF18Q9Y5U5 241 aa10.73□□□□□ -0.69
LETMD1-209ENST00000547318 M0QXV9 152 aa10.72□□□□□ -0.69
LETMD1-209ENST00000547318 EMP1P54849 157 aa10.72□□□□□ -0.69
LETMD1-209ENST00000547318 MRPS36P82909 103 aaKnown RBP10.72□□□□□ -0.69
LETMD1-209ENST00000547318 SIGMAR1Q99720 223 aa10.72□□□□□ -0.69
LETMD1-209ENST00000547318 C1QTNF4Q9BXJ3 329 aa10.72□□□□□ -0.69
LETMD1-209ENST00000547318 DEFB131AP59861 70 aa10.72□□□□□ -0.69
LETMD1-209ENST00000547318 ETDBQ3ZM63 59 aa10.72□□□□□ -0.69
LETMD1-209ENST00000547318 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.71□□□□□ -0.698e-8■■■■□ 23.6
LETMD1-209ENST00000547318 CFC1BP0CG36 223 aa10.71□□□□□ -0.69
LETMD1-209ENST00000547318 CFC1P0CG37 223 aa10.71□□□□□ -0.69
LETMD1-209ENST00000547318 RAX2Q96IS3 184 aa10.71□□□□□ -0.69
LETMD1-209ENST00000547318 DUX3Q96PT4 197 aa10.71□□□□□ -0.69
LETMD1-209ENST00000547318 APOMO95445 188 aa10.7□□□□□ -0.7
LETMD1-209ENST00000547318 CD28P10747 220 aa10.7□□□□□ -0.7
LETMD1-209ENST00000547318 TRAV25A0A0B4J276 109 aa10.7□□□□□ -0.7
LETMD1-209ENST00000547318 LOC107984156A0A0G2JMH3 177 aa10.7□□□□□ -0.7
LETMD1-209ENST00000547318 GAGE12HA6NDE8 117 aa10.7□□□□□ -0.7
LETMD1-209ENST00000547318 SBSPONQ8IVN8 264 aa10.7□□□□□ -0.7
LETMD1-209ENST00000547318 ARL17AQ8IVW1 177 aa10.7□□□□□ -0.7
LETMD1-209ENST00000547318 RELNP78509 3460 aa10.69□□□□□ -0.7
LETMD1-209ENST00000547318 TINCRA0A1B0GVN0 87 aa10.69□□□□□ -0.7
LETMD1-209ENST00000547318 RBMY1A1P0DJD3 496 aaKnown RBP10.69□□□□□ -0.7
LETMD1-209ENST00000547318 RBMY1CP0DJD4 496 aa10.69□□□□□ -0.7
LETMD1-209ENST00000547318 RBMY1FQ15415 496 aaKnown RBP10.69□□□□□ -0.7
LETMD1-209ENST00000547318 BEAN1Q3B7T3 259 aa10.69□□□□□ -0.7
LETMD1-209ENST00000547318 KNCNA6PVL3 124 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 INSP01308 110 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 PSMB2P49721 201 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 DYNLRB2Q8TF09 96 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 NRGNQ92686 78 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 TIMM21Q9BVV7 248 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 IGHV3-53P01767 116 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 SLURP1P55000 103 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 RNF183Q96D59 192 aa10.68□□□□□ -0.7
LETMD1-209ENST00000547318 TSSC4Q9Y5U2 329 aaPredicted RBP10.68□□□□□ -0.7
LETMD1-209ENST00000547318 A0A0J9YXV3 536 aa10.67□□□□□ -0.7
LETMD1-209ENST00000547318 FOXI1Q12951 378 aa10.67□□□□□ -0.7
LETMD1-209ENST00000547318 DEFB113Q30KQ7 82 aa10.67□□□□□ -0.7
LETMD1-209ENST00000547318 SH2D6Q7Z4S9 175 aa10.67□□□□□ -0.7
LETMD1-209ENST00000547318 MAP6D1Q9H9H5 199 aa10.67□□□□□ -0.7
LETMD1-209ENST00000547318 IGHV1-58A0A0C4DH39 117 aa10.67□□□□□ -0.7
LETMD1-209ENST00000547318 TMEM61Q8N0U2 210 aa10.67□□□□□ -0.7
LETMD1-209ENST00000547318 RS1O15537 224 aa10.66□□□□□ -0.7
LETMD1-209ENST00000547318 TEN1Q86WV5 123 aa10.66□□□□□ -0.7
LETMD1-209ENST00000547318 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
LETMD1-209ENST00000547318 OPRPNQ99935 248 aaPredicted RBP10.66□□□□□ -0.7
LETMD1-209ENST00000547318 SPANXDQ9BXN6 97 aa10.66□□□□□ -0.7
LETMD1-209ENST00000547318 SPANXCQ9NY87 97 aa10.66□□□□□ -0.7
LETMD1-209ENST00000547318 A4D1N5 150 aa10.65□□□□□ -0.7
LETMD1-209ENST00000547318 RBMY1BA6NDE4 496 aaKnown RBP10.65□□□□□ -0.7
LETMD1-209ENST00000547318 RBMY1EA6NEQ0 496 aaKnown RBP10.65□□□□□ -0.7
LETMD1-209ENST00000547318 RBMY1DP0C7P1 496 aaKnown RBP10.65□□□□□ -0.7
LETMD1-209ENST00000547318 IGHV3-30-3P0DP02 117 aa10.65□□□□□ -0.7
LETMD1-209ENST00000547318 DEFB114Q30KQ6 69 aa10.65□□□□□ -0.7
LETMD1-209ENST00000547318 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
LETMD1-209ENST00000547318 TMEM263Q8WUH6 116 aaKnown RBP10.65□□□□□ -0.7
LETMD1-209ENST00000547318 ERG28Q9UKR5 140 aa10.65□□□□□ -0.7
LETMD1-209ENST00000547318 AKAP6Q13023 2319 aa10.65□□□□□ -0.7
LETMD1-209ENST00000547318 A0A0J9YXY3 114 aa10.65□□□□□ -0.71
LETMD1-209ENST00000547318 TIMM17BO60830 172 aa10.65□□□□□ -0.71
LETMD1-209ENST00000547318 SMAGPQ0VAQ4 97 aa10.65□□□□□ -0.71
LETMD1-209ENST00000547318 UBE2D4Q9Y2X8 147 aa10.65□□□□□ -0.71
LETMD1-209ENST00000547318 DOPEY1Q5JWR5 2465 aa10.64□□□□□ -0.71
LETMD1-209ENST00000547318 IGHV3-33P01772 117 aa10.64□□□□□ -0.71
LETMD1-209ENST00000547318 LINC01600Q96MT4 127 aa10.64□□□□□ -0.71
LETMD1-209ENST00000547318 LINC01587Q99440 93 aa10.64□□□□□ -0.71
LETMD1-209ENST00000547318 CHCHD7Q9BUK0 85 aa10.64□□□□□ -0.71
LETMD1-209ENST00000547318 YAE1D1Q9NRH1 226 aa10.64□□□□□ -0.71
LETMD1-209ENST00000547318 TCL1BO95988 128 aa10.63□□□□□ -0.71
LETMD1-209ENST00000547318 SCGB1C2P0DMR2 95 aa10.63□□□□□ -0.71
LETMD1-209ENST00000547318 SMCPP49901 116 aaPredicted RBP10.63□□□□□ -0.71
LETMD1-209ENST00000547318 CMC4P56277 68 aaPredicted RBP10.63□□□□□ -0.71
LETMD1-209ENST00000547318 AZU1P20160 251 aa10.63□□□□□ -0.71
LETMD1-209ENST00000547318 TIRAPP58753 221 aa10.63□□□□□ -0.71
LETMD1-209ENST00000547318 DEFB104AQ8WTQ1 72 aa10.63□□□□□ -0.71
LETMD1-209ENST00000547318 CSMD1Q96PZ7 3565 aa10.63□□□□□ -0.71
LETMD1-209ENST00000547318 PRRC2AP48634 2157 aaKnown RBP10.63□□□□□ -0.71
LETMD1-209ENST00000547318 MUSTN1Q8IVN3 82 aa10.62□□□□□ -0.71
LETMD1-209ENST00000547318 FAM104AQ969W3 186 aa10.62□□□□□ -0.71
LETMD1-209ENST00000547318 VSIG2Q96IQ7 327 aa10.62□□□□□ -0.71
LETMD1-209ENST00000547318 ITPR1Q14643 2758 aa10.62□□□□□ -0.71
LETMD1-209ENST00000547318 IFITM1P13164 125 aa10.62□□□□□ -0.71
LETMD1-209ENST00000547318 DEFB136Q30KP8 78 aa10.62□□□□□ -0.71
LETMD1-209ENST00000547318 MAPK1IP1LQ8NDC0 245 aa10.62□□□□□ -0.71
LETMD1-209ENST00000547318 SPTAN1Q13813 2472 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms