RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CACFD1Q9UGQ2 172 aa1.39□□□□□ -2.19
SNHG1-224ENST00000545688 C3orf85A0A1B0GTC6 90 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 MEIS3P1A6NDR6 274 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 H3BQ15 152 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 M0R2P5 195 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 TAAR5O14804 337 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 OR4E1P0C645 316 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 ORM2P19652 201 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 AKR1C2P52895 323 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 PIGPP57054 158 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 TSPAN5P62079 268 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 Q0VG73 95 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 ZNF266Q14584 549 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 RHOHQ15669 191 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 SP6Q3SY56 376 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 PYDC2Q56P42 97 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 Q6AWC8 147 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 OR4C5Q8NGB2 326 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 OR5H2Q8NGV7 314 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 OR1S1Q8NH92 325 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 PTH2Q96A98 100 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 MARVELD1Q9BSK0 173 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 TMEM147Q9BVK8 224 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 C8orf4Q9NR00 106 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 NDUFB11Q9NX14 153 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 ZNF492Q9P255 531 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 PXMP4Q9Y6I8 212 aa1.38□□□□□ -2.19
SNHG1-224ENST00000545688 IGHV3-64A0A075B6Q5 118 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 A0A087WWC5 75 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 TRAV26-2A0A0B4J265 109 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 FABP12A6NFH5 140 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 FAM24AA6NFZ4 105 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 PCP4L1A6NKN8 68 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 CEBPZOSA8MTT3 80 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 GABARAPH6UMI1 98 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 M0R3E3 92 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 HYPMO75409 117 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 TCRBP04435 133 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 OR10J4P0C629 311 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 SEC11BP0C7V7 166 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 S100GP29377 79 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 S100A7P31151 101 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 RNASE4P34096 147 aaKnown RBP1.37□□□□□ -2.19
SNHG1-224ENST00000545688 RCVRNP35243 200 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 INPP1P49441 399 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 UBE2MP61081 183 aaKnown RBP1.37□□□□□ -2.19
SNHG1-224ENST00000545688 POLR2GP62487 172 aaKnown RBP eCLIP1.37□□□□□ -2.19
SNHG1-224ENST00000545688 GNGT1P63211 74 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 ASB16-AS1Q495Z4 193 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 CFAP126Q5VTH2 177 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 C22orf42Q6IC83 251 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 CYP2G1PQ6ZSU1 146 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 C10orf67Q8IYJ2 551 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 PACRGLQ8N7B6 248 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 TMEM75Q8N9X5 138 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 DTD1Q8TEA8 209 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 PRADC1Q9BSG0 188 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 SH3BGRL3Q9H299 93 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 OR51M1Q9H341 326 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 TXNL4BQ9NX01 149 aaKnown RBP1.37□□□□□ -2.19
SNHG1-224ENST00000545688 MTFP1Q9UDX5 166 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 HIGD1AQ9Y241 93 aa1.37□□□□□ -2.19
SNHG1-224ENST00000545688 IGLV10-54A0A075B6I4 117 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 TRBV19A0A075B6N1 114 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 FNDC10F2Z333 226 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 GNRH2O43555 120 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 NDUFS6O75380 124 aaKnown RBP1.36□□□□□ -2.19
SNHG1-224ENST00000545688 GPX1P07203 203 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 SULT1A3P0DMM9 295 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 SULT1A4P0DMN0 295 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 MGST1P10620 155 aaKnown RBP1.36□□□□□ -2.19
SNHG1-224ENST00000545688 MYL9P24844 172 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 HLA-DMAP28067 261 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 RAB11AP62491 216 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 COX6A2Q02221 97 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 PDE6HQ13956 83 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 SPCS2Q15005 226 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 ELOBQ15370 118 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 ZNF726P1Q15940 193 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 MIAQ16674 131 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 GUK1Q16774 197 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 LINC00305Q7Z4B0 112 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 BPIFA4PQ86YQ2 179 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 C8orf59Q8N0T1 100 aaPredicted RBP1.36□□□□□ -2.19
SNHG1-224ENST00000545688 INO80EQ8NBZ0 244 aaPredicted RBP1.36□□□□□ -2.19
SNHG1-224ENST00000545688 OR13C8Q8NGS7 320 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 TERB2Q8NHR7 220 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 SRRQ9GZT4 340 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 ARV1Q9H2C2 271 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 IFT46Q9NQC8 304 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 TMEM14CQ9P0S9 112 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 SSR3Q9UNL2 185 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 PRELID1Q9Y255 219 aa1.36□□□□□ -2.19
SNHG1-224ENST00000545688 A0A096LNI7 61 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.35□□□□□ -2.19
SNHG1-224ENST00000545688 RBAKDNA6NC62 111 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 SDHAF1A6NFY7 115 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 CRYM-AS1A6NIL9 109 aa1.35□□□□□ -2.19
SNHG1-224ENST00000545688 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.35□□□□□ -2.19
SNHG1-224ENST00000545688 TYMSP04818 313 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms