RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 NHLRC2Q8NBF2 726 aa5.68□□□□□ -1.5
USP28-215ENST00000545608 SDF2L1Q9HCN8 221 aa5.68□□□□□ -1.5
USP28-215ENST00000545608 C11orf21Q9P2W6 132 aa5.68□□□□□ -1.5
USP28-215ENST00000545608 IGHV3-38A0A0C4DH36 116 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 XKRY2A2RUG3 117 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 LRCOL1A6NCL2 159 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 RS1O15537 224 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 CXCL1P09341 107 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 GZMBP10144 247 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 HAMPP81172 84 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 SH2D6Q7Z4S9 175 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 C10orf126Q8N4M7 172 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 SLC25A29Q8N8R3 303 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 OR10G9Q8NGN4 311 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 OR10G7Q8NGN6 311 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 FRZBQ92765 325 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 KCNS1Q96KK3 526 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 NAT8Q9UHE5 227 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 URGCP-MRPS24S4R325 110 aa5.67□□□□□ -1.5
USP28-215ENST00000545608 FAT1Q14517 4588 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 IGHV3-73A0A0B4J1V6 119 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 FBLL1A6NHQ2 334 aaKnown RBP5.66□□□□□ -1.5
USP28-215ENST00000545608 ZNF727A8MUV8 499 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 IBA57-AS1B1ANH7 110 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 DLEU1O43261 78 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 PFN1P07737 140 aaKnown RBP5.66□□□□□ -1.5
USP28-215ENST00000545608 STAG3L2P0CL84 134 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 STAG3L3P0CL85 134 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 ARL14EPLP0DKL9 152 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 ZNF25P17030 456 aaPredicted RBP5.66□□□□□ -1.5
USP28-215ENST00000545608 PCP4P48539 62 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 SUMO2P61956 95 aaKnown RBP5.66□□□□□ -1.5
USP28-215ENST00000545608 RPL19P84098 196 aaKnown RBP5.66□□□□□ -1.5
USP28-215ENST00000545608 ZNF876PQ49A33 203 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 PDZD11Q5EBL8 140 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 LINC01556Q5JQF7 62 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 CFAP126Q5VTH2 177 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 CYB561D1Q8N8Q1 229 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 TMEM75Q8N9X5 138 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 PSG8Q9UQ74 426 aa5.66□□□□□ -1.5
USP28-215ENST00000545608 IGLV5-52A0A0A0MRZ9 124 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 TRAV8-6A0A0B4J262 113 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 TRBV6-4A0A1B0GX49 114 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 PGPEP1LA6NFU8 196 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 PSCAO43653 123 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 SCGB1D1O95968 90 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 IGLV2-11P01706 119 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 IGHV3-30P01768 117 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 IGHV3-33P01772 117 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 TCRAP04437 139 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 IGHV3-30-3P0DP02 117 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 IGHV3-30-5P0DP03 117 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 BCL2P10415 239 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 RNASE3P12724 160 aaKnown RBP5.65□□□□□ -1.5
USP28-215ENST00000545608 ATP6V0CP27449 155 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 GCHFRP30047 84 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 CDC34P49427 236 aaPredicted RBP5.65□□□□□ -1.5
USP28-215ENST00000545608 TMEM241Q24JQ0 296 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 KRTAP19-4Q3LI73 84 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 OR10J3Q5JRS4 329 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 ZNF664Q8N3J9 261 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 C5orf17Q8NAS9 161 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 C9orf85Q96MD7 179 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 IMMP2LQ96T52 175 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 PRADC1Q9BSG0 188 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 NDFIP1Q9BT67 221 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 Q9HAA7 133 aa5.65□□□□□ -1.5
USP28-215ENST00000545608 SERTM2A0A1B0GWG4 89 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 MAP1LC3B2A6NCE7 125 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 CIDEAO60543 219 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 G0S2P27469 103 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 SERF2P84101 59 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 RHOHQ15669 191 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 SAPCD1Q5SSQ6 148 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 COL5A1-AS1Q5SY13 56 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 LELP1Q5T871 98 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 PRNTQ86SH4 94 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 Q8N814 137 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 ATP6V0E2Q8NHE4 81 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
USP28-215ENST00000545608 PTH2Q96A98 100 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 PSMG3Q9BT73 122 aaPredicted RBP5.64□□□□□ -1.51
USP28-215ENST00000545608 MAP1LC3BQ9GZQ8 125 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 SH3BGRL3Q9H299 93 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 GNG13Q9P2W3 67 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 EPDR1Q9UM22 224 aa5.64□□□□□ -1.51
USP28-215ENST00000545608 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
USP28-215ENST00000545608 A0A1B0GV50 99 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 GGTLC3B5MD39 225 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 TMEM250H0YL14 139 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 FHITP49789 147 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 WFDC2Q14508 124 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 OR2D3Q8NGH3 330 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 MBD3L1Q8WWY6 194 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 LINC00479Q96M42 142 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 MIEN1Q9BRT3 115 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 TMEM70Q9BUB7 260 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 GTSF1LQ9H1H1 148 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 MANBALQ9NQG1 85 aa5.63□□□□□ -1.51
USP28-215ENST00000545608 Q9UF83 564 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms