RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 OCIAD2Q56VL3 154 aa12.5□□□□□ -0.41
PTPRO-209ENST00000543886 A0A087WX48 190 aa12.49□□□□□ -0.41
PTPRO-209ENST00000543886 TRBV6-5A0A0K0K1A5 114 aa12.49□□□□□ -0.41
PTPRO-209ENST00000543886 SDHAF1A6NFY7 115 aa12.49□□□□□ -0.41
PTPRO-209ENST00000543886 M0QY20 66 aa12.49□□□□□ -0.41
PTPRO-209ENST00000543886 TRPT1Q86TN4 253 aaKnown RBP12.49□□□□□ -0.41
PTPRO-209ENST00000543886 LINC00467Q9BRT7 94 aa12.49□□□□□ -0.41
PTPRO-209ENST00000543886 M0R2P5 195 aa12.49□□□□□ -0.41
PTPRO-209ENST00000543886 A6NDN8 102 aa12.48□□□□□ -0.41
PTPRO-209ENST00000543886 NMUP48645 174 aa12.48□□□□□ -0.41
PTPRO-209ENST00000543886 MRPL35Q9NZE8 188 aaKnown RBP12.48□□□□□ -0.41
PTPRO-209ENST00000543886 TRAV12-1A0A0B4J245 112 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 ADARB2-AS1A8MUL3 147 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 PRM2P04554 102 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 FGF6P10767 208 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 CMC4P56277 68 aaPredicted RBP12.47□□□□□ -0.41
PTPRO-209ENST00000543886 XCL2Q9UBD3 114 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 CYSLTR1Q9Y271 337 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 TRAV8-6A0A0B4J262 113 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 TRBV27A0A0K0K1C4 114 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 LINC01549A6NIU2 74 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 PLNP26678 52 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 ZFP2Q6ZN57 461 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 VPS25Q9BRG1 176 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 HHLA3Q9XRX5 114 aa12.47□□□□□ -0.41
PTPRO-209ENST00000543886 GAGE12BA1L429 117 aa12.46□□□□□ -0.41
PTPRO-209ENST00000543886 A8MWV9 139 aa12.46□□□□□ -0.41
PTPRO-209ENST00000543886 H7C1H1 209 aa12.46□□□□□ -0.41
PTPRO-209ENST00000543886 K7ERU9 68 aa12.46□□□□□ -0.41
PTPRO-209ENST00000543886 HIVEP2P31629 2446 aa12.46□□□□□ -0.42
PTPRO-209ENST00000543886 SIVA1O15304 175 aa12.46□□□□□ -0.42
PTPRO-209ENST00000543886 PIK3CD-AS1Q5SR53 167 aa12.46□□□□□ -0.42
PTPRO-209ENST00000543886 MORN3Q6PF18 240 aaPredicted RBP12.46□□□□□ -0.42
PTPRO-209ENST00000543886 GTF2H5Q6ZYL4 71 aa12.46□□□□□ -0.42
PTPRO-209ENST00000543886 BOD1L2Q8IYS8 172 aa12.46□□□□□ -0.42
PTPRO-209ENST00000543886 WNK1Q9H4A3 2382 aa12.45□□□□□ -0.42
PTPRO-209ENST00000543886 SETD2Q9BYW2 2564 aaPredicted RBP12.45□□□□□ -0.42
PTPRO-209ENST00000543886 H3BRM9 83 aa12.45□□□□□ -0.42
PTPRO-209ENST00000543886 HSD52Q0P140 79 aa12.45□□□□□ -0.42
PTPRO-209ENST00000543886 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
PTPRO-209ENST00000543886 GAGE10A6NGK3 116 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 F8VRH5 84 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 IGLV1-51P01701 117 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 ZC2HC1BQ5TFG8 222 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 C11orf72Q8NBR9 251 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 NEXN-AS1Q8NBZ9 246 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 PTH2Q96A98 100 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 SPXQ9BT56 116 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 CHTOPQ9Y3Y2 248 aaKnown RBP12.44□□□□□ -0.42
PTPRO-209ENST00000543886 NDUFA11Q86Y39 141 aa12.44□□□□□ -0.42
PTPRO-209ENST00000543886 IGHV3-73A0A0B4J1V6 119 aa12.43□□□□□ -0.42
PTPRO-209ENST00000543886 C9orf118A6NHY6 69 aa12.43□□□□□ -0.42
PTPRO-209ENST00000543886 INAFM1C9JVW0 142 aa12.43□□□□□ -0.42
PTPRO-209ENST00000543886 GTSCR1Q86UQ5 136 aa12.43□□□□□ -0.42
PTPRO-209ENST00000543886 IGHV3OR16-12A0A075B7B8 117 aa12.42□□□□□ -0.42
PTPRO-209ENST00000543886 RIPPLY3P57055 190 aa12.42□□□□□ -0.42
PTPRO-209ENST00000543886 PCP2Q8IVA1 136 aa12.42□□□□□ -0.42
PTPRO-209ENST00000543886 RHOHQ15669 191 aa12.42□□□□□ -0.42
PTPRO-209ENST00000543886 EDA2RQ9HAV5 297 aa12.42□□□□□ -0.42
PTPRO-209ENST00000543886 IGKV2D-26A0A0A0MRZ7 120 aa12.41□□□□□ -0.42
PTPRO-209ENST00000543886 I3L3M4 83 aa12.41□□□□□ -0.42
PTPRO-209ENST00000543886 PF4P02776 101 aa12.41□□□□□ -0.42
PTPRO-209ENST00000543886 C1orf158Q8N1D5 194 aa12.41□□□□□ -0.42
PTPRO-209ENST00000543886 TMEM141Q96I45 108 aa12.41□□□□□ -0.42
PTPRO-209ENST00000543886 FAM110AQ9BQ89 295 aa12.41□□□□□ -0.42
PTPRO-209ENST00000543886 MRPL16Q9NX20 251 aaKnown RBP12.41□□□□□ -0.42
PTPRO-209ENST00000543886 RHODO00212 210 aa12.4□□□□□ -0.42
PTPRO-209ENST00000543886 KRTAP10-3P60369 221 aa12.4□□□□□ -0.42
PTPRO-209ENST00000543886 RPL39P62891 51 aaKnown RBP12.4□□□□□ -0.42
PTPRO-209ENST00000543886 CFAP126Q5VTH2 177 aa12.4□□□□□ -0.42
PTPRO-209ENST00000543886 UFSP1Q6NVU6 142 aa12.4□□□□□ -0.42
PTPRO-209ENST00000543886 PRSS29PA6NIE9 313 aa12.39□□□□□ -0.43
PTPRO-209ENST00000543886 IGIPA6NJ69 53 aa12.39□□□□□ -0.43
PTPRO-209ENST00000543886 TIMM17AQ99595 171 aa12.39□□□□□ -0.43
PTPRO-209ENST00000543886 TSHBP01222 138 aa12.39□□□□□ -0.43
PTPRO-209ENST00000543886 AZU1P20160 251 aa12.39□□□□□ -0.43
PTPRO-209ENST00000543886 BEAN1Q3B7T3 259 aa12.39□□□□□ -0.43
PTPRO-209ENST00000543886 K7EP34 96 aa12.38□□□□□ -0.43
PTPRO-209ENST00000543886 TNFRSF18Q9Y5U5 241 aa12.38□□□□□ -0.43
PTPRO-209ENST00000543886 H3BUT2 72 aa12.38□□□□□ -0.43
PTPRO-209ENST00000543886 P0DMU3 169 aa12.37□□□□□ -0.43
PTPRO-209ENST00000543886 FAM231AP0DMU4 169 aa12.37□□□□□ -0.43
PTPRO-209ENST00000543886 FAM231CP0DMU5 169 aa12.37□□□□□ -0.43
PTPRO-209ENST00000543886 PMVKQ15126 192 aa12.37□□□□□ -0.43
PTPRO-209ENST00000543886 WFDC10AQ9H1F0 79 aa12.37□□□□□ -0.43
PTPRO-209ENST00000543886 RS1O15537 224 aa12.36□□□□□ -0.43
PTPRO-209ENST00000543886 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
PTPRO-209ENST00000543886 OR5A1Q8NGJ0 315 aa12.36□□□□□ -0.43
PTPRO-209ENST00000543886 C19orf73Q9NVV2 129 aa12.36□□□□□ -0.43
PTPRO-209ENST00000543886 Q6ZSN1 163 aa12.35□□□□□ -0.43
PTPRO-209ENST00000543886 LINC00482Q8N8I6 264 aa12.35□□□□□ -0.43
PTPRO-209ENST00000543886 TTTY13Q9BZ97 58 aa12.35□□□□□ -0.43
PTPRO-209ENST00000543886 SETXQ7Z333 2677 aaKnown RBP12.35□□□□□ -0.43
PTPRO-209ENST00000543886 NSD1Q96L73 2696 aaPredicted RBP12.35□□□□□ -0.43
PTPRO-209ENST00000543886 C20orf203Q8NBC4 194 aa12.34□□□□□ -0.43
PTPRO-209ENST00000543886 IL17DQ8TAD2 202 aa12.34□□□□□ -0.43
PTPRO-209ENST00000543886 TMEM263Q8WUH6 116 aaKnown RBP12.34□□□□□ -0.43
PTPRO-209ENST00000543886 NACAE9PAV3 2078 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms