RNA–Protein interactions for RNA: ENST00000543026.5

DDX11-224, Transcript of DEAD/H-box helicase 11, human

TSL 2

Gene DDX11, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-224	ENST00000543026	PRSS1	P07477	247 aa		10.86	□□□□□ -0.67
DDX11-224	ENST00000543026	SMIM17	P0DL12	118 aa		10.86	□□□□□ -0.67
DDX11-224	ENST00000543026	RNF151	Q2KHN1	245 aa		10.86	□□□□□ -0.67
DDX11-224	ENST00000543026	LINC00482	Q8N8I6	264 aa		10.86	□□□□□ -0.67
DDX11-224	ENST00000543026	SYT8	Q8NBV8	401 aa		10.86	□□□□□ -0.67
DDX11-224	ENST00000543026	INS	P01308	110 aa		10.86	□□□□□ -0.67
DDX11-224	ENST00000543026	HTN1	P15515	57 aa		10.86	□□□□□ -0.67
DDX11-224	ENST00000543026	JPT2	Q9H910	190 aa		10.86	□□□□□ -0.67
DDX11-224	ENST00000543026	DPM2	O94777	84 aa		10.85	□□□□□ -0.67
DDX11-224	ENST00000543026	CMC4	P56277	68 aa	Predicted RBP	10.85	□□□□□ -0.67
DDX11-224	ENST00000543026	TRPT1	Q86TN4	253 aa	Known RBP	10.85	□□□□□ -0.67
DDX11-224	ENST00000543026	KIF25-AS1	Q9Y6Z4	181 aa		10.85	□□□□□ -0.67
DDX11-224	ENST00000543026	LAGE3	Q14657	143 aa		10.85	□□□□□ -0.67
DDX11-224	ENST00000543026		A0A087WWL8	130 aa		10.84	□□□□□ -0.67
DDX11-224	ENST00000543026		A0A1W2PPM0	123 aa		10.84	□□□□□ -0.67
DDX11-224	ENST00000543026		K7ERU9	68 aa		10.84	□□□□□ -0.67
DDX11-224	ENST00000543026	BEAN1	Q3B7T3	259 aa		10.84	□□□□□ -0.67
DDX11-224	ENST00000543026	POM121L12	Q8N7R1	296 aa		10.84	□□□□□ -0.67
DDX11-224	ENST00000543026	RASL10A	Q92737	203 aa		10.84	□□□□□ -0.67
DDX11-224	ENST00000543026	LINC00315	P59091	139 aa		10.83	□□□□□ -0.68
DDX11-224	ENST00000543026	LINC01587	Q99440	93 aa		10.83	□□□□□ -0.68
DDX11-224	ENST00000543026	TTTY13	Q9BZ97	58 aa		10.83	□□□□□ -0.68
DDX11-224	ENST00000543026	XCL2	Q9UBD3	114 aa		10.83	□□□□□ -0.68
DDX11-224	ENST00000543026	TRBV25-1	A0A075B6N4	114 aa		10.83	□□□□□ -0.68
DDX11-224	ENST00000543026	RPL39L	Q96EH5	51 aa	Known RBP	10.83	□□□□□ -0.68
DDX11-224	ENST00000543026	TM2D2	Q9BX73	214 aa		10.83	□□□□□ -0.68
DDX11-224	ENST00000543026	JMJD1C	Q15652	2540 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	PRM2	P04554	102 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	SMIM13	P0DJ93	91 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	FXYD2	P54710	66 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	ZC2HC1B	Q5TFG8	222 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	NEGR1	Q7Z3B1	354 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	GTSCR1	Q86UQ5	136 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	FAM110A	Q9BQ89	295 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	NAA38	Q9BRA0	125 aa	Known RBP	10.82	□□□□□ -0.68
DDX11-224	ENST00000543026	WFDC10A	Q9H1F0	79 aa		10.82	□□□□□ -0.68
DDX11-224	ENST00000543026		A0A087WX48	190 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	ZNF876P	Q49A33	203 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	FAM74A4	Q5TZK3	123 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	OR5A1	Q8NGJ0	315 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	RAB37	Q96AX2	223 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	VPS25	Q9BRG1	176 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	LINC00467	Q9BRT7	94 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	CHAC1	Q9BUX1	264 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	SMIM2	Q9BVW6	85 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	MRPL35	Q9NZE8	188 aa	Known RBP	10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	SUMO2	P61956	95 aa	Known RBP	10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	ZNF415	Q09FC8	603 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	SUMO4	Q6EEV6	95 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026	C19orf73	Q9NVV2	129 aa		10.81	□□□□□ -0.68
DDX11-224	ENST00000543026		F5H697	171 aa		10.8	□□□□□ -0.68
DDX11-224	ENST00000543026	C20orf78	Q9BR46	151 aa		10.8	□□□□□ -0.68
DDX11-224	ENST00000543026	PPP1R17	O96001	155 aa		10.8	□□□□□ -0.68
DDX11-224	ENST00000543026	SAMD5	Q5TGI4	173 aa		10.8	□□□□□ -0.68
DDX11-224	ENST00000543026	MAPKAPK5-AS1	Q8N8E1	139 aa		10.8	□□□□□ -0.68
DDX11-224	ENST00000543026	CITED1	Q99966	193 aa		10.8	□□□□□ -0.68
DDX11-224	ENST00000543026	TRAV12-1	A0A0B4J245	112 aa		10.79	□□□□□ -0.68
DDX11-224	ENST00000543026		G3V4G9	280 aa		10.79	□□□□□ -0.68
DDX11-224	ENST00000543026	GCSH	P23434	173 aa		10.79	□□□□□ -0.68
DDX11-224	ENST00000543026	CEND1	Q8N111	149 aa		10.79	□□□□□ -0.68
DDX11-224	ENST00000543026	SPCS1	Q9Y6A9	102 aa		10.79	□□□□□ -0.68
DDX11-224	ENST00000543026	TENM1	Q9UKZ4	2725 aa		10.79	□□□□□ -0.68
DDX11-224	ENST00000543026	CRYGD	P07320	174 aa		10.78	□□□□□ -0.68
DDX11-224	ENST00000543026	ZNF56	Q15929	161 aa		10.78	□□□□□ -0.68
DDX11-224	ENST00000543026	C1orf158	Q8N1D5	194 aa		10.78	□□□□□ -0.68
DDX11-224	ENST00000543026	IGHV3OR16-12	A0A075B7B8	117 aa		10.78	□□□□□ -0.68
DDX11-224	ENST00000543026		M0R2P5	195 aa		10.78	□□□□□ -0.68
DDX11-224	ENST00000543026	FABP2	P12104	132 aa		10.78	□□□□□ -0.68
DDX11-224	ENST00000543026	RPL35A	P18077	110 aa	Known RBP	10.78	□□□□□ -0.68
DDX11-224	ENST00000543026	C11orf72	Q8NBR9	251 aa		10.78	□□□□□ -0.68
DDX11-224	ENST00000543026	SPATA3	Q8NHX4	192 aa		10.78	□□□□□ -0.68
DDX11-224	ENST00000543026	PLN	P26678	52 aa		10.77	□□□□□ -0.69
DDX11-224	ENST00000543026	COTL1	Q14019	142 aa		10.77	□□□□□ -0.69
DDX11-224	ENST00000543026	TAL2	Q16559	108 aa		10.77	□□□□□ -0.69
DDX11-224	ENST00000543026	CSTL1	Q9H114	145 aa		10.77	□□□□□ -0.69
DDX11-224	ENST00000543026		K7EMI3	77 aa		10.77	□□□□□ -0.69
DDX11-224	ENST00000543026	TOMM6	Q96B49	74 aa		10.77	□□□□□ -0.69
DDX11-224	ENST00000543026	ATR	Q13535	2644 aa		10.77	□□□□□ -0.69
DDX11-224	ENST00000543026	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.76	□□□□□ -0.69
DDX11-224	ENST00000543026		H7C1H1	209 aa		10.76	□□□□□ -0.69
DDX11-224	ENST00000543026	C9orf66	Q5T8R8	295 aa		10.76	□□□□□ -0.69
DDX11-224	ENST00000543026	TEP1	Q99973	2627 aa	Known RBP	10.76	□□□□□ -0.69
DDX11-224	ENST00000543026	BAHCC1	Q9P281	2608 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026		F8VRH5	84 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026	GIG44	P09565	113 aa	Predicted RBP	10.75	□□□□□ -0.69
DDX11-224	ENST00000543026	AZU1	P20160	251 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026	INSL3	P51460	131 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026	ORMDL2	Q53FV1	153 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026		E9PLD3	99 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026	NEXN-AS1	Q8NBZ9	246 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026	PTH2	Q96A98	100 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026	SPX	Q9BT56	116 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026	VWF	P04275	2813 aa		10.75	□□□□□ -0.69
DDX11-224	ENST00000543026		K7ERJ3	54 aa		10.74	□□□□□ -0.69
DDX11-224	ENST00000543026		M0QY20	66 aa		10.74	□□□□□ -0.69
DDX11-224	ENST00000543026	PIK3CD-AS1	Q5SR53	167 aa		10.74	□□□□□ -0.69
DDX11-224	ENST00000543026		A8MWV9	139 aa		10.73	□□□□□ -0.69
DDX11-224	ENST00000543026	RPL32	P62910	135 aa	Known RBP	10.73	□□□□□ -0.69
DDX11-224	ENST00000543026	MRPL16	Q9NX20	251 aa	Known RBP	10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms