RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 GADD45AP24522 165 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 DEFA3P59666 94 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 SPCS3P61009 180 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 PPP1R8Q12972 351 aaKnown RBP0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 MOBPQ13875 183 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 FAM74A4Q5TZK3 123 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 ZNF818PQ6ZRF7 136 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 ARPINQ7Z6K5 226 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 BPIFA4PQ86YQ2 179 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 ACBD7Q8N6N7 88 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 Q8N9L7 120 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 RTBDNQ9BSG5 229 aaPredicted RBP0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 CCDC32Q9BV29 185 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 MED28Q9H204 178 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 IL36BQ9NZH7 164 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 SHPKQ9UHJ6 478 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 ELF5Q9UKW6 265 aaPredicted RBP0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 RAB26Q9ULW5 256 aa0.83□□□□□ -2.28
TRAV1-1-201ENST00000542354 TRAV34A0A0B4J273 112 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 TRAV21A0A0B4J279 112 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 PHGR1C9JFL3 82 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 M0R3E3 92 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 MRASO14807 208 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 CCL25O15444 150 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 SSX5O60225 188 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 ZNF80P51504 273 aaPredicted RBP0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 TAS2R20P59543 309 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 FXYD4P59646 89 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 PRLHP81277 87 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 COQ5Q5HYK3 327 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 C1orf100Q5SVJ3 147 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 C9orf129Q5T035 196 aaKnown RBP0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 RPL22L1Q6P5R6 122 aaKnown RBP0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 CD164L2Q6UWJ8 174 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 AHSA2Q719I0 299 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 OR11H4Q8NGC9 324 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 RNASE11Q8TAA1 199 aaKnown RBP0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 C15orf40Q8WUR7 153 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 TMEM243Q9BU79 118 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 TREM1Q9NP99 234 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 TMEM242Q9NWH2 141 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 U3KQ87 197 aa0.82□□□□□ -2.28
TRAV1-1-201ENST00000542354 FAM236AA0A1B0GUQ0 79 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 FAM236BA0A1B0GV22 79 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 CEBPZOSA8MTT3 80 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 BBIP1A8MTZ0 92 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 NDUFC2-KCTD14E9PQ53 114 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 H3BQ15 152 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 J3QRE1 110 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 WRBO00258 174 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 COX7A2LO14548 114 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 NDUFA1O15239 70 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 COX7A2P2O60397 106 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 SHBGP04278 402 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 IL5P05113 134 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 S100GP29377 79 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 GTF2A1P52655 376 aaPredicted RBP0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 ATP5IP56385 69 aaPredicted RBP0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 GABARAPL2P60520 117 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 RPS25P62851 125 aaKnown RBP0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 ARL6IP1Q15041 203 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 IAH1Q2TAA2 248 aaPredicted RBP0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 CCDC58Q4VC31 144 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 NMSQ5H8A3 153 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 FAM19A1Q7Z5A9 133 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 TMEM17Q86X19 198 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 CYGBQ8WWM9 190 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 DIRAS2Q96HU8 199 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 OBSCN-AS1Q96MR7 158 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 PAIP2Q9BPZ3 127 aaKnown RBP0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 TMEM109Q9BVC6 243 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 HIGD2AQ9BW72 106 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 NUDT15Q9NV35 164 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 SCN3BQ9NY72 215 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 DIMT1Q9UNQ2 313 aaKnown RBP0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 LENEPQ9Y5L5 61 aa0.81□□□□□ -2.28
TRAV1-1-201ENST00000542354 IGKV2-28A0A075B6P5 120 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 LINC00959A0A1B0GUT2 108 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 METTL21EPA6NDL7 271 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 G3V3Q6 166 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 M0R129 80 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 EDF1O60869 148 aaKnown RBP0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 IGKV2D-28P01615 120 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 IGLC2P0DOY2 106 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 HIST1H1DP16402 221 aaKnown RBP0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 S100A4P26447 101 aaKnown RBP0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 RANBP1P43487 201 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 CAV2P51636 162 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 AKR1C2P52895 323 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 PLP1P60201 277 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 SPAG11BQ08648 103 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 PNRC1Q12796 327 aaPredicted RBP0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 PPP1R1AQ13522 171 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 KRTAP21-2Q3LI59 83 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 HSP90B2PQ58FF3 399 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 Q86TA4 180 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 CLVS1Q8IUQ0 354 aaPredicted RBP0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 OR10R2Q8NGX6 335 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 CANT1Q8WVQ1 401 aa0.8□□□□□ -2.28
TRAV1-1-201ENST00000542354 FAM218AQ96MZ4 157 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms