RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 SRSF2Q01130 221 aaKnown RBP10.07□□□□□ -0.8
PTPN1-202ENST00000541713 UFSP1Q6NVU6 142 aa10.07□□□□□ -0.8
PTPN1-202ENST00000541713 TRAV2A0A0B4J234 112 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 A0A1B0GWB2 263 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 TSHBP01222 138 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 A0A0J9YXV3 536 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 IGLV1-40P01703 118 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 XCL2Q9UBD3 114 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 TSPEAR-AS2P59090 65 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 COTL1Q14019 142 aa10.06□□□□□ -0.8
PTPN1-202ENST00000541713 SIVA1O15304 175 aa10.05□□□□□ -0.8
PTPN1-202ENST00000541713 COX6B1P14854 86 aa10.05□□□□□ -0.8
PTPN1-202ENST00000541713 CRYGDP07320 174 aa10.05□□□□□ -0.8
PTPN1-202ENST00000541713 PSMB8P28062 276 aa10.05□□□□□ -0.8
PTPN1-202ENST00000541713 ZNRF2Q8NHG8 242 aa10.05□□□□□ -0.8
PTPN1-202ENST00000541713 IGHV1OR15-1A0A075B7D0 117 aa10.04□□□□□ -0.8
PTPN1-202ENST00000541713 A0A0J9YX75 114 aa10.04□□□□□ -0.8
PTPN1-202ENST00000541713 LINC01356Q8N9X3 169 aa10.04□□□□□ -0.8
PTPN1-202ENST00000541713 VCYO14598 125 aa10.04□□□□□ -0.8
PTPN1-202ENST00000541713 RBMY1A1P0DJD3 496 aaKnown RBP10.04□□□□□ -0.8
PTPN1-202ENST00000541713 RBMY1CP0DJD4 496 aa10.04□□□□□ -0.8
PTPN1-202ENST00000541713 LINC00315P59091 139 aa10.04□□□□□ -0.8
PTPN1-202ENST00000541713 RBMY1FQ15415 496 aaKnown RBP10.04□□□□□ -0.8
PTPN1-202ENST00000541713 ZNF625Q96I27 306 aaPredicted RBP10.04□□□□□ -0.8
PTPN1-202ENST00000541713 LINC01587Q99440 93 aa10.04□□□□□ -0.8
PTPN1-202ENST00000541713 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.03□□□□□ -0.8
PTPN1-202ENST00000541713 IGKV2-29A2NJV5 120 aaPredicted RBP10.03□□□□□ -0.8
PTPN1-202ENST00000541713 Q1RN00 199 aa10.03□□□□□ -0.8
PTPN1-202ENST00000541713 DYNLRB2Q8TF09 96 aa10.03□□□□□ -0.8
PTPN1-202ENST00000541713 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
PTPN1-202ENST00000541713 TRAV8-3A0A0A6YYJ7 113 aa10.03□□□□□ -0.8
PTPN1-202ENST00000541713 IGKV3OR2-268A0A0C4DH90 116 aa10.03□□□□□ -0.8
PTPN1-202ENST00000541713 CFHR3Q02985 330 aa10.03□□□□□ -0.8
PTPN1-202ENST00000541713 TMEM61Q8N0U2 210 aa10.03□□□□□ -0.8
PTPN1-202ENST00000541713 IGHV4-4A0A075B6R2 117 aa10.02□□□□□ -0.8
PTPN1-202ENST00000541713 Q96MF0 132 aa10.02□□□□□ -0.8
PTPN1-202ENST00000541713 LENEPQ9Y5L5 61 aa10.02□□□□□ -0.8
PTPN1-202ENST00000541713 TSSC4Q9Y5U2 329 aaPredicted RBP10.02□□□□□ -0.8
PTPN1-202ENST00000541713 KLLNB2CW77 178 aa10.02□□□□□ -0.81
PTPN1-202ENST00000541713 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
PTPN1-202ENST00000541713 NDUFS8O00217 210 aa10.02□□□□□ -0.81
PTPN1-202ENST00000541713 PMVKQ15126 192 aa10.02□□□□□ -0.81
PTPN1-202ENST00000541713 DAND5Q8N907 189 aa10.02□□□□□ -0.81
PTPN1-202ENST00000541713 SYT8Q8NBV8 401 aa10.01□□□□□ -0.81
PTPN1-202ENST00000541713 KIF25-AS1Q9Y6Z4 181 aa10.01□□□□□ -0.81
PTPN1-202ENST00000541713 AKAP9Q99996 3911 aa10.01□□□□□ -0.81
PTPN1-202ENST00000541713 GAGE13Q4V321 117 aa10.01□□□□□ -0.81
PTPN1-202ENST00000541713 Q5PR19 223 aa10.01□□□□□ -0.81
PTPN1-202ENST00000541713 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
PTPN1-202ENST00000541713 VCX2Q9H322 139 aa10.01□□□□□ -0.81
PTPN1-202ENST00000541713 UBR5O95071 2799 aaPredicted RBP10.01□□□□□ -0.81
PTPN1-202ENST00000541713 CD28P10747 220 aa10□□□□□ -0.81
PTPN1-202ENST00000541713 HERVK_113P61574 105 aa10□□□□□ -0.81
PTPN1-202ENST00000541713 MORN3Q6PF18 240 aaPredicted RBP10□□□□□ -0.81
PTPN1-202ENST00000541713 K7EQG2 157 aa10□□□□□ -0.81
PTPN1-202ENST00000541713 FOXI2Q6ZQN5 318 aa10□□□□□ -0.81
PTPN1-202ENST00000541713 Q6ZSN1 163 aa10□□□□□ -0.81
PTPN1-202ENST00000541713 OR5A1Q8NGJ0 315 aa10□□□□□ -0.81
PTPN1-202ENST00000541713 TM2D2Q9BX73 214 aa10□□□□□ -0.81
PTPN1-202ENST00000541713 IGLV4-69A0A075B6H9 119 aa9.99□□□□□ -0.81
PTPN1-202ENST00000541713 DLX4Q92988 240 aaPredicted RBP9.99□□□□□ -0.81
PTPN1-202ENST00000541713 HIGD1BQ9P298 99 aa9.99□□□□□ -0.81
PTPN1-202ENST00000541713 M0QY20 66 aa9.99□□□□□ -0.81
PTPN1-202ENST00000541713 POLR2KP53803 58 aaKnown RBP9.99□□□□□ -0.81
PTPN1-202ENST00000541713 RRN3P1Q2M238 152 aa9.99□□□□□ -0.81
PTPN1-202ENST00000541713 VPREB3Q9UKI3 123 aa9.99□□□□□ -0.81
PTPN1-202ENST00000541713 TNFRSF18Q9Y5U5 241 aa9.99□□□□□ -0.81
PTPN1-202ENST00000541713 TRBV7-3A0A075B6L6 115 aa9.99□□□□□ -0.81
PTPN1-202ENST00000541713 G3V4G9 280 aa9.99□□□□□ -0.81
PTPN1-202ENST00000541713 E9PLD3 99 aa9.98□□□□□ -0.81
PTPN1-202ENST00000541713 Q6ZSV7 163 aa9.98□□□□□ -0.81
PTPN1-202ENST00000541713 TENM4Q6N022 2769 aa9.98□□□□□ -0.81
PTPN1-202ENST00000541713 J3QQQ9 107 aa9.98□□□□□ -0.81
PTPN1-202ENST00000541713 IGIPA6NJ69 53 aa9.98□□□□□ -0.81
PTPN1-202ENST00000541713 PLA2G2AP14555 144 aa9.98□□□□□ -0.81
PTPN1-202ENST00000541713 CRIP2P52943 208 aaPredicted RBP9.98□□□□□ -0.81
PTPN1-202ENST00000541713 WFDC10AQ9H1F0 79 aa9.98□□□□□ -0.81
PTPN1-202ENST00000541713 ATRQ13535 2644 aa9.97□□□□□ -0.81
PTPN1-202ENST00000541713 FAM19A4Q96LR4 140 aa9.97□□□□□ -0.81
PTPN1-202ENST00000541713 TRAV12-1A0A0B4J245 112 aa9.97□□□□□ -0.81
PTPN1-202ENST00000541713 SPINK8P0C7L1 97 aa9.97□□□□□ -0.81
PTPN1-202ENST00000541713 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
PTPN1-202ENST00000541713 NDUFA7O95182 113 aa9.97□□□□□ -0.81
PTPN1-202ENST00000541713 ZNF702PQ9H963 129 aa9.97□□□□□ -0.81
PTPN1-202ENST00000541713 FLNBO75369 2602 aaKnown RBP9.96□□□□□ -0.81
PTPN1-202ENST00000541713 AZU1P20160 251 aa9.96□□□□□ -0.81
PTPN1-202ENST00000541713 RBMY1BA6NDE4 496 aaKnown RBP9.96□□□□□ -0.82
PTPN1-202ENST00000541713 RBMY1EA6NEQ0 496 aaKnown RBP9.96□□□□□ -0.82
PTPN1-202ENST00000541713 H3BUA1 57 aa9.96□□□□□ -0.82
PTPN1-202ENST00000541713 RBMY1DP0C7P1 496 aaKnown RBP9.96□□□□□ -0.82
PTPN1-202ENST00000541713 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.82
PTPN1-202ENST00000541713 A4D1N5 150 aa9.95□□□□□ -0.82
PTPN1-202ENST00000541713 TSPAN13O95857 204 aa9.95□□□□□ -0.82
PTPN1-202ENST00000541713 TRPT1Q86TN4 253 aaKnown RBP9.95□□□□□ -0.82
PTPN1-202ENST00000541713 WFDC11Q8NEX6 87 aa9.95□□□□□ -0.82
PTPN1-202ENST00000541713 TRGV1A0A0A0MS02 117 aa9.95□□□□□ -0.82
PTPN1-202ENST00000541713 A0A0J9YY99 117 aa9.95□□□□□ -0.82
PTPN1-202ENST00000541713 RPL35AP18077 110 aaKnown RBP9.95□□□□□ -0.82
PTPN1-202ENST00000541713 K7EMT4 169 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms