RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 TRAV21A0A0B4J279 112 aa5.82□□□□□ -1.48
YBX3-211ENST00000541351 RBAKDNA6NC62 111 aa5.82□□□□□ -1.48
YBX3-211ENST00000541351 M0R036 132 aa5.82□□□□□ -1.48
YBX3-211ENST00000541351 GZMBP10144 247 aa5.82□□□□□ -1.48
YBX3-211ENST00000541351 RPL13AP40429 203 aaKnown RBP5.82□□□□□ -1.48
YBX3-211ENST00000541351 LRRC37A5PQ49AS3 106 aa5.82□□□□□ -1.48
YBX3-211ENST00000541351 GPR132Q9UNW8 380 aa5.82□□□□□ -1.48
YBX3-211ENST00000541351 IGLV10-54A0A075B6I4 117 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 IGKV2-24A0A0C4DH68 120 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 IFITM10A6NMD0 228 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 A8MWV9 139 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 H3BP45 60 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 LINC00614P0C842 121 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 COX6A2Q02221 97 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 PPP1R1AQ13522 171 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 HIST3H2BBQ8N257 126 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 PRR26Q8N8Z3 221 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 FER1L6-AS1Q8NA97 138 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 OR10D4PQ8NGN7 298 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 OR2G3Q8NGZ4 309 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 TMEM14CQ9P0S9 112 aa5.81□□□□□ -1.48
YBX3-211ENST00000541351 UMAD1C9J7I0 102 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 GNRH2O43555 120 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 MBP02144 154 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 TYMSP04818 313 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 METTL15P1P0C7V9 234 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 UBE2D1P51668 147 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 NDUFA6P56556 154 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 EXOC3-AS1Q8N2X6 119 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 PTH2Q96A98 100 aa5.8□□□□□ -1.48
YBX3-211ENST00000541351 ACTR3CQ9C0K3 210 aaPredicted RBP5.8□□□□□ -1.48
YBX3-211ENST00000541351 BORCS7-ASMTA0A0B4J1R7 106 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 B4DEV8 164 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 C9JQL5 133 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 H0YIZ8 118 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 SFT2D2O95562 160 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 GCGP01275 180 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 RPS10P46783 165 aaKnown RBP5.79□□□□□ -1.48
YBX3-211ENST00000541351 JOSD1Q15040 202 aaPredicted RBP5.79□□□□□ -1.48
YBX3-211ENST00000541351 TMEM128Q5BJH2 165 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 PIK3CD-AS1Q5SR53 167 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 CFAP161Q6P656 301 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 OR10G7Q8NGN6 311 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 CDIP1Q9H305 208 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 PSENENQ9NZ42 101 aa5.79□□□□□ -1.48
YBX3-211ENST00000541351 TRAV8-4A0A0B4J246 113 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 RHODO00212 210 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 NDUFB4O95168 129 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 P01737 135 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 CAMLGP49069 296 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 IL15RAQ13261 267 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 ZNF674Q2M3X9 581 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 KHDC3LQ587J8 217 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 AKR1C8PQ5T2L2 129 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 RPL7L1Q6DKI1 246 aaKnown RBP5.78□□□□□ -1.48
YBX3-211ENST00000541351 ISOC2Q96AB3 205 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 PRR13Q9NZ81 148 aa5.78□□□□□ -1.48
YBX3-211ENST00000541351 M0R143 59 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BKO60814 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BJP06899 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BOP23527 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BBP33778 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 AKR1C3P42330 323 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 PCP4P48539 62 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BDP58876 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 S100A10P60903 97 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BCP62807 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 RPL36AP83881 106 aaKnown RBP5.77□□□□□ -1.49
YBX3-211ENST00000541351 COTL1Q14019 142 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST2H2BEQ16778 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 COA6Q5JTJ3 125 aaKnown RBP5.77□□□□□ -1.49
YBX3-211ENST00000541351 ZNF506Q5JVG8 444 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BHQ93079 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 RPL36ALQ969Q0 106 aaKnown RBP5.77□□□□□ -1.49
YBX3-211ENST00000541351 PACRGQ96M98 296 aaPredicted RBP5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BNQ99877 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 HIST1H2BMQ99879 126 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 EIF5A2Q9GZV4 153 aaKnown RBP5.77□□□□□ -1.49
YBX3-211ENST00000541351 TMEM242Q9NWH2 141 aa5.77□□□□□ -1.49
YBX3-211ENST00000541351 DLEU1O43261 78 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 MT-ND6P03923 174 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 RPL12P30050 165 aaKnown RBP5.76□□□□□ -1.49
YBX3-211ENST00000541351 PNRC1Q12796 327 aaPredicted RBP5.76□□□□□ -1.49
YBX3-211ENST00000541351 MPV17L2Q567V2 206 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 SVIPQ8NHG7 77 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 TVP23CQ96ET8 276 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 CHCHD5Q9BSY4 110 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 MLST8Q9BVC4 326 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 SAMD10Q9BYL1 202 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 PARLQ9H300 379 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 PRR34Q9NV39 138 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 OR5AC2Q9NZP5 309 aa5.76□□□□□ -1.49
YBX3-211ENST00000541351 A0A087WWL8 130 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 TRBV6-8A0A0A6YYG3 113 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 TRBV10-1A0A0K0K1A3 114 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 NBEAP1P0C6P0 100 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 FABP4P15090 132 aa5.75□□□□□ -1.49
YBX3-211ENST00000541351 TAGLN2P37802 199 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms