RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 TMEM223A0PJW6 202 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 A8MTW9 85 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 IGHV1OR15-1A0A075B7D0 117 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 TMEM89A2RUT3 159 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 AZU1P20160 251 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 SPINK13Q1W4C9 94 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 SBSPONQ8IVN8 264 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 KIR2DL4Q99706 377 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 EDA2RQ9HAV5 297 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 GAGE12HA6NDE8 117 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 IGKV3-20P01619 116 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 RHOHQ15669 191 aa7□□□□□ -1.29
CNOT4-212ENST00000541284 B4DSR2 109 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 ZNF22P17026 224 aaPredicted RBP6.99□□□□□ -1.29
CNOT4-212ENST00000541284 FAM74A4Q5TZK3 123 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 C20orf203Q8NBC4 194 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 IGLV4-3A0A075B6K6 122 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 RBMY1BA6NDE4 496 aaKnown RBP6.99□□□□□ -1.29
CNOT4-212ENST00000541284 RBMY1EA6NEQ0 496 aaKnown RBP6.99□□□□□ -1.29
CNOT4-212ENST00000541284 RBMY1DP0C7P1 496 aaKnown RBP6.99□□□□□ -1.29
CNOT4-212ENST00000541284 SCGB1D4Q6XE38 83 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 MRPL16Q9NX20 251 aaKnown RBP6.99□□□□□ -1.29
CNOT4-212ENST00000541284 Q9UF83 564 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 J3QQQ9 107 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 CARD19Q96LW7 228 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 GTSF1LQ9H1H1 148 aa6.99□□□□□ -1.29
CNOT4-212ENST00000541284 F5H697 171 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 CDIP1Q9H305 208 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 TCL1BO95988 128 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 SYNJ2BPP57105 145 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 TRPT1Q86TN4 253 aaKnown RBP6.98□□□□□ -1.29
CNOT4-212ENST00000541284 ATP6V0E2Q8NHE4 81 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 DLX4Q92988 240 aaPredicted RBP6.98□□□□□ -1.29
CNOT4-212ENST00000541284 C1QTNF4Q9BXJ3 329 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 ZNF702PQ9H963 129 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 ZNF56Q15929 161 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 TMEM170BQ5T4T1 132 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 C10orf126Q8N4M7 172 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 LITAFQ99732 161 aa6.98□□□□□ -1.29
CNOT4-212ENST00000541284 TMEM238LA0A1B0GVL6 79 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 A6NJY4 79 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 LEPROTO15243 131 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 PROK1P58294 105 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 FOXI1Q12951 378 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 SRSF9Q13242 221 aaKnown RBP eCLIP6.97□□□□□ -1.29
CNOT4-212ENST00000541284 SFTA2Q6UW10 78 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 RHODO00212 210 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 APOMO95445 188 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 PRM2P04554 102 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 HERVK_113P61574 105 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 C18orf65Q6ZTR6 163 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 Q8N2B8 174 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 DUX5Q96PT3 197 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 SCGB1A1P11684 91 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 LRRC75A-AS1Q8N1F1 130 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 TMEM263Q8WUH6 116 aaKnown RBP6.97□□□□□ -1.29
CNOT4-212ENST00000541284 PTH2Q96A98 100 aa6.97□□□□□ -1.29
CNOT4-212ENST00000541284 CSPG4Q6UVK1 2322 aa6.96□□□□□ -1.29
CNOT4-212ENST00000541284 SPG11Q96JI7 2443 aa6.96□□□□□ -1.29
CNOT4-212ENST00000541284 GATA3P23771 443 aa6.96□□□□□ -1.29
CNOT4-212ENST00000541284 HOXD3P31249 432 aaPredicted RBP6.96□□□□□ -1.29
CNOT4-212ENST00000541284 Q6ZSN1 163 aa6.96□□□□□ -1.29
CNOT4-212ENST00000541284 SIGMAR1Q99720 223 aa6.96□□□□□ -1.29
CNOT4-212ENST00000541284 A0A0J9YXV3 536 aa6.96□□□□□ -1.3
CNOT4-212ENST00000541284 SNRPD3P62318 126 aaKnown RBP6.96□□□□□ -1.3
CNOT4-212ENST00000541284 SCGB2A2Q13296 93 aa6.96□□□□□ -1.3
CNOT4-212ENST00000541284 SYT8Q8NBV8 401 aa6.96□□□□□ -1.3
CNOT4-212ENST00000541284 I3L3M4 83 aa6.95□□□□□ -1.3
CNOT4-212ENST00000541284 M0R2P5 195 aa6.95□□□□□ -1.3
CNOT4-212ENST00000541284 DSCR9P59020 149 aa6.95□□□□□ -1.3
CNOT4-212ENST00000541284 ELANEP08246 267 aa6.95□□□□□ -1.3
CNOT4-212ENST00000541284 PSMB2P49721 201 aa6.95□□□□□ -1.3
CNOT4-212ENST00000541284 SMAGPQ0VAQ4 97 aa6.95□□□□□ -1.3
CNOT4-212ENST00000541284 PYGO1Q9Y3Y4 419 aa6.95□□□□□ -1.3
CNOT4-212ENST00000541284 CENPEQ02224 2701 aa6.95□□□□□ -1.3
CNOT4-212ENST00000541284 A4D1N5 150 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 KNCNA6PVL3 124 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 IGHV3-33P01772 117 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 ANK2Q01484 3957 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 MRPS36P82909 103 aaKnown RBP6.94□□□□□ -1.3
CNOT4-212ENST00000541284 KRTAP1-1Q07627 177 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 LINC01356Q8N9X3 169 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 UBE2E2Q96LR5 201 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 CHCHD7Q9BUK0 85 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 CEMP1Q6PRD7 247 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-212ENST00000541284 Q6YL49 198 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 MAPK1IP1LQ8NDC0 245 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 PRO1854Q9UHT4 67 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 VPREB3Q9UKI3 123 aa6.94□□□□□ -1.3
CNOT4-212ENST00000541284 SORL1Q92673 2214 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 LOC107984156A0A0G2JMH3 177 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 ARL17AQ8IVW1 177 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 TRGV11A0A075B6L2 103 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 IGHV3-64A0A075B6Q5 118 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 A0A0J9YXY3 114 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 H3BMM0 161 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 Q5PR19 223 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 C11orf72Q8NBR9 251 aa6.93□□□□□ -1.3
CNOT4-212ENST00000541284 A0A0B4J2C4 111 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms