RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 P0DMU3 169 aa9.1□□□□□ -0.95
NPC1-202ENST00000540608 FAM231AP0DMU4 169 aa9.1□□□□□ -0.95
NPC1-202ENST00000540608 FAM231CP0DMU5 169 aa9.1□□□□□ -0.95
NPC1-202ENST00000540608 SNRPD3P62318 126 aaKnown RBP9.1□□□□□ -0.95
NPC1-202ENST00000540608 TMEM95Q3KNT9 176 aa9.1□□□□□ -0.95
NPC1-202ENST00000540608 USP9XQ93008 2570 aaPredicted RBP9.1□□□□□ -0.95
NPC1-202ENST00000540608 IGKV3-20P01619 116 aa9.1□□□□□ -0.95
NPC1-202ENST00000540608 SBSPONQ8IVN8 264 aa9.1□□□□□ -0.95
NPC1-202ENST00000540608 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
NPC1-202ENST00000540608 IGSF10Q6WRI0 2623 aa9.09□□□□□ -0.95
NPC1-202ENST00000540608 K7EQG2 157 aa9.09□□□□□ -0.95
NPC1-202ENST00000540608 C20orf203Q8NBC4 194 aa9.09□□□□□ -0.95
NPC1-202ENST00000540608 NRGNQ92686 78 aa9.09□□□□□ -0.95
NPC1-202ENST00000540608 I3L3M4 83 aa9.09□□□□□ -0.95
NPC1-202ENST00000540608 CDIP1Q9H305 208 aa9.09□□□□□ -0.95
NPC1-202ENST00000540608 TEN1Q86WV5 123 aa9.08□□□□□ -0.96
NPC1-202ENST00000540608 PPDPFLQ8WWR9 84 aa9.08□□□□□ -0.96
NPC1-202ENST00000540608 PTH2Q96A98 100 aa9.08□□□□□ -0.96
NPC1-202ENST00000540608 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.08□□□□□ -0.967e-11■■■□□ 15.5
NPC1-202ENST00000540608 DOPEY1Q5JWR5 2465 aa9.08□□□□□ -0.96
NPC1-202ENST00000540608 CARD19Q96LW7 228 aa9.08□□□□□ -0.96
NPC1-202ENST00000540608 RHODO00212 210 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 SCGB1C2P0DMR2 95 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 SPINK13Q1W4C9 94 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 A0A1B0GV72 72 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 TMEM89A2RUT3 159 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 A8MWV9 139 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
NPC1-202ENST00000540608 RNF152Q8N8N0 203 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 VCX2Q9H322 139 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 A4D1N5 150 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 C10orf99Q6UWK7 81 aa9.07□□□□□ -0.96
NPC1-202ENST00000540608 CSPG4Q6UVK1 2322 aa9.06□□□□□ -0.96
NPC1-202ENST00000540608 IGLV4-3A0A075B6K6 122 aa9.06□□□□□ -0.96
NPC1-202ENST00000540608 B4DSR2 109 aa9.06□□□□□ -0.96
NPC1-202ENST00000540608 TCTEX1D4Q5JR98 221 aa9.06□□□□□ -0.96
NPC1-202ENST00000540608 TMEM263Q8WUH6 116 aaKnown RBP9.06□□□□□ -0.96
NPC1-202ENST00000540608 TRGV11A0A075B6L2 103 aa9.05□□□□□ -0.96
NPC1-202ENST00000540608 A0A0J9YXV3 536 aa9.05□□□□□ -0.96
NPC1-202ENST00000540608 IGHV3-33P01772 117 aa9.05□□□□□ -0.96
NPC1-202ENST00000540608 IGHV4-59P01825 116 aa9.05□□□□□ -0.96
NPC1-202ENST00000540608 ZANQ9Y493 2812 aa9.05□□□□□ -0.96
NPC1-202ENST00000540608 A0A0B4J2C4 111 aa9.05□□□□□ -0.96
NPC1-202ENST00000540608 EIF4EBP3O60516 100 aaPredicted RBP9.05□□□□□ -0.96
NPC1-202ENST00000540608 FHL3Q13643 280 aa9.05□□□□□ -0.96
NPC1-202ENST00000540608 MUSTN1Q8IVN3 82 aa9.05□□□□□ -0.96
NPC1-202ENST00000540608 TRAV2A0A0B4J234 112 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 CRYBA4P53673 196 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 DEFB112Q30KQ8 113 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 RAX2Q96IS3 184 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 BBC3Q96PG8 261 aaPredicted RBP9.04□□□□□ -0.96
NPC1-202ENST00000540608 EDA2RQ9HAV5 297 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 IGHV3-64A0A075B6Q5 118 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 SYNJ2BPP57105 145 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 PYGO1Q9Y3Y4 419 aa9.04□□□□□ -0.96
NPC1-202ENST00000540608 FBN2P35556 2912 aa9.03□□□□□ -0.96
NPC1-202ENST00000540608 M0QXV9 152 aa9.03□□□□□ -0.96
NPC1-202ENST00000540608 M0R2P5 195 aa9.03□□□□□ -0.96
NPC1-202ENST00000540608 GATA3P23771 443 aa9.03□□□□□ -0.96
NPC1-202ENST00000540608 CKS1BP61024 79 aa9.03□□□□□ -0.96
NPC1-202ENST00000540608 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.03□□□□□ -0.96
NPC1-202ENST00000540608 TGFAP01135 160 aa9.03□□□□□ -0.96
NPC1-202ENST00000540608 SPINK8P0C7L1 97 aa9.03□□□□□ -0.96
NPC1-202ENST00000540608 A0A0J9YXY3 114 aa9.02□□□□□ -0.96
NPC1-202ENST00000540608 ZNF843Q8N446 348 aa9.02□□□□□ -0.96
NPC1-202ENST00000540608 ANKRD29Q8N6D5 301 aa9.02□□□□□ -0.96
NPC1-202ENST00000540608 MYO18BQ8IUG5 2567 aa9.02□□□□□ -0.97
NPC1-202ENST00000540608 Q6ZUT4 128 aa9.02□□□□□ -0.97
NPC1-202ENST00000540608 MAPK1IP1LQ8NDC0 245 aa9.02□□□□□ -0.97
NPC1-202ENST00000540608 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
NPC1-202ENST00000540608 SLC25A20O43772 301 aa9.01□□□□□ -0.97
NPC1-202ENST00000540608 MT-ATP8P03928 68 aa9.01□□□□□ -0.97
NPC1-202ENST00000540608 MRPS36P82909 103 aaKnown RBP9.01□□□□□ -0.97
NPC1-202ENST00000540608 SPXQ9BT56 116 aa9.01□□□□□ -0.97
NPC1-202ENST00000540608 IGHV3-30-3P0DP02 117 aa9.01□□□□□ -0.97
NPC1-202ENST00000540608 XGP55808 180 aa9.01□□□□□ -0.97
NPC1-202ENST00000540608 RBMY1A1P0DJD3 496 aaKnown RBP9.01□□□□□ -0.97
NPC1-202ENST00000540608 RBMY1CP0DJD4 496 aa9.01□□□□□ -0.97
NPC1-202ENST00000540608 CD28P10747 220 aa9.01□□□□□ -0.97
NPC1-202ENST00000540608 RBMY1FQ15415 496 aaKnown RBP9.01□□□□□ -0.97
NPC1-202ENST00000540608 USP9YO00507 2555 aaPredicted RBP9□□□□□ -0.97
NPC1-202ENST00000540608 C9JAW5 83 aa9□□□□□ -0.97
NPC1-202ENST00000540608 DUX5Q96PT3 197 aa9□□□□□ -0.97
NPC1-202ENST00000540608 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
NPC1-202ENST00000540608 H7C2G1 150 aa9□□□□□ -0.97
NPC1-202ENST00000540608 HOXD3P31249 432 aaPredicted RBP9□□□□□ -0.97
NPC1-202ENST00000540608 POLQO75417 2590 aa9□□□□□ -0.97
NPC1-202ENST00000540608 USP24Q9UPU5 2620 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 MXRA5Q9NR99 2828 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 CENPEQ02224 2701 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 IGHV3-73A0A0B4J1V6 119 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 TMEM262E9PQX1 116 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 ELANEP08246 267 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 PROK1P58294 105 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 LINC01356Q8N9X3 169 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 LITAFQ99732 161 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 TNFRSF18Q9Y5U5 241 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 A0A096LNT2 108 aa8.99□□□□□ -0.97
NPC1-202ENST00000540608 DSCR9P59020 149 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms