RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 DEFB4AO15263 64 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 S100A4P26447 101 aaKnown RBP11.09□□□□□ -0.63
DDB1-216ENST00000539739 OR10G8Q8NGN5 311 aa11.09□□□□□ -0.63
DDB1-216ENST00000539739 RNASE7Q9H1E1 156 aaKnown RBP11.09□□□□□ -0.63
DDB1-216ENST00000539739 TIMM8BQ9Y5J9 83 aaPredicted RBP11.09□□□□□ -0.63
DDB1-216ENST00000539739 ASIPP42127 132 aa11.08□□□□□ -0.64
DDB1-216ENST00000539739 FAM231DQ6ZW35 169 aa11.08□□□□□ -0.64
DDB1-216ENST00000539739 IGHV3-16A0A0C4DH30 117 aa11.07□□□□□ -0.64
DDB1-216ENST00000539739 FAM231BA6NCW3 169 aa11.07□□□□□ -0.64
DDB1-216ENST00000539739 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
DDB1-216ENST00000539739 TCL1AP56279 114 aa11.07□□□□□ -0.64
DDB1-216ENST00000539739 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
DDB1-216ENST00000539739 C11orf72Q8NBR9 251 aa11.07□□□□□ -0.64
DDB1-216ENST00000539739 MDFICQ9P1T7 246 aa11.07□□□□□ -0.64
DDB1-216ENST00000539739 TENM3Q9P273 2699 aa11.07□□□□□ -0.64
DDB1-216ENST00000539739 TEX48A0A1B0GUV7 120 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 A0A1B0GW15 77 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.06□□□□□ -0.64
DDB1-216ENST00000539739 RASL11AQ6T310 242 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 RPP21Q9H633 154 aaKnown RBP11.06□□□□□ -0.64
DDB1-216ENST00000539739 OSTCQ9NRP0 149 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 HUWE1Q7Z6Z7 4374 aaKnown RBP11.06□□□□□ -0.64
DDB1-216ENST00000539739 PLAC8L1A1L4L8 177 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 LYRM9A8MSI8 78 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 SPART-AS1P0CW21 52 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
DDB1-216ENST00000539739 OR10AG1Q8NH19 301 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 TMEM191AQ9H0A3 160 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 VCX2Q9H322 139 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 NOP10Q9NPE3 64 aaKnown RBP11.06□□□□□ -0.64
DDB1-216ENST00000539739 CYSLTR1Q9Y271 337 aa11.06□□□□□ -0.64
DDB1-216ENST00000539739 TMEM97Q5BJF2 176 aa11.05□□□□□ -0.64
DDB1-216ENST00000539739 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
DDB1-216ENST00000539739 F8W1H4 67 aa11.04□□□□□ -0.64
DDB1-216ENST00000539739 RNASE3P12724 160 aaKnown RBP11.04□□□□□ -0.64
DDB1-216ENST00000539739 DKK2Q9UBU2 259 aa11.04□□□□□ -0.64
DDB1-216ENST00000539739 A8MWL6 223 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 H3BVH4 76 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 FABP2P12104 132 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 PMCHP20382 165 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 CT83Q5H943 113 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 IL17DQ8TAD2 202 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 TSKUQ8WUA8 353 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 C9orf85Q96MD7 179 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 TMEM70Q9BUB7 260 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 SCRT2Q9NQ03 307 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 COL7A1Q02388 2944 aa11.03□□□□□ -0.64
DDB1-216ENST00000539739 A0A1W2PPM0 123 aa11.02□□□□□ -0.64
DDB1-216ENST00000539739 ARMS2P0C7Q2 107 aa11.02□□□□□ -0.64
DDB1-216ENST00000539739 LGALS9BQ3B8N2 356 aa11.02□□□□□ -0.64
DDB1-216ENST00000539739 ERASQ7Z444 233 aa11.02□□□□□ -0.64
DDB1-216ENST00000539739 ZNF575Q86XF7 245 aa11.02□□□□□ -0.64
DDB1-216ENST00000539739 C11orf45Q8TAV5 145 aa11.02□□□□□ -0.64
DDB1-216ENST00000539739 SPCS1Q9Y6A9 102 aa11.02□□□□□ -0.64
DDB1-216ENST00000539739 TRGV1A0A0A0MS02 117 aa11.02□□□□□ -0.65
DDB1-216ENST00000539739 M0R2P5 195 aa11.02□□□□□ -0.65
DDB1-216ENST00000539739 SIVA1O15304 175 aa11.02□□□□□ -0.65
DDB1-216ENST00000539739 SPINK4O60575 86 aa11.02□□□□□ -0.65
DDB1-216ENST00000539739 MED14OSP0DP75 135 aa11.02□□□□□ -0.65
DDB1-216ENST00000539739 EDA2RQ9HAV5 297 aa11.02□□□□□ -0.65
DDB1-216ENST00000539739 CELA1Q9UNI1 258 aa11.02□□□□□ -0.65
DDB1-216ENST00000539739 PHLDA3Q9Y5J5 127 aa11.02□□□□□ -0.65
DDB1-216ENST00000539739 DAD1P61803 113 aa11.01□□□□□ -0.65
DDB1-216ENST00000539739 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
DDB1-216ENST00000539739 C5orf47Q569G3 176 aa11.01□□□□□ -0.65
DDB1-216ENST00000539739 HSPB8Q9UJY1 196 aa11.01□□□□□ -0.65
DDB1-216ENST00000539739 V9GYV3 84 aa11.01□□□□□ -0.65
DDB1-216ENST00000539739 STAB2Q8WWQ8 2551 aa11.01□□□□□ -0.65
DDB1-216ENST00000539739 OR5AL1P0C617 328 aa11□□□□□ -0.65
DDB1-216ENST00000539739 DEFB130BP0DP73 79 aa11□□□□□ -0.65
DDB1-216ENST00000539739 DEFB130AP0DP74 79 aa11□□□□□ -0.65
DDB1-216ENST00000539739 BOD1L2Q8IYS8 172 aa11□□□□□ -0.65
DDB1-216ENST00000539739 TPPP3Q9BW30 176 aa11□□□□□ -0.65
DDB1-216ENST00000539739 NAT8BQ9UHF3 227 aa11□□□□□ -0.65
DDB1-216ENST00000539739 F2Z2F3 143 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 SNAI2O43623 268 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 HSBP1O75506 76 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 GAGE7O76087 117 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 ZNF876PQ49A33 203 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 Q6ZTI0 123 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 SYT8Q8NBV8 401 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 RASL10AQ92737 203 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 PTH2Q96A98 100 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 SS18L2Q9UHA2 77 aa10.99□□□□□ -0.65
DDB1-216ENST00000539739 TRGV2A0A075B6R0 118 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 IGLC6P0CF74 106 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 COX8AP10176 69 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 ATP6V0E2Q8NHE4 81 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 GFRA4Q9GZZ7 299 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 TGP01266 2768 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 NANOS2P60321 138 aaKnown RBP10.98□□□□□ -0.65
DDB1-216ENST00000539739 C12orf74Q32Q52 190 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 PIK3CD-AS1Q5SR53 167 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 SPANXN1Q5VSR9 72 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 TMEM136Q6ZRR5 245 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 LINC00612Q8N6U2 182 aa10.98□□□□□ -0.65
DDB1-216ENST00000539739 M0R381 172 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms