RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 NHLRC4P0CG21 123 aaPredicted RBP10.96□□□□□ -0.65
VAMP1-207ENST00000539047 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
VAMP1-207ENST00000539047 RHOHQ15669 191 aa10.96□□□□□ -0.65
VAMP1-207ENST00000539047 RNASEKQ6P5S7 137 aaKnown RBP10.96□□□□□ -0.65
VAMP1-207ENST00000539047 DNAJC30Q96LL9 226 aa10.96□□□□□ -0.65
VAMP1-207ENST00000539047 PRADC1Q9BSG0 188 aa10.96□□□□□ -0.65
VAMP1-207ENST00000539047 NIT2Q9NQR4 276 aa10.96□□□□□ -0.65
VAMP1-207ENST00000539047 CELA1Q9UNI1 258 aa10.96□□□□□ -0.65
VAMP1-207ENST00000539047 LOC389332A0A1B0GUA5 103 aa10.95□□□□□ -0.66
VAMP1-207ENST00000539047 IQCJQ1A5X6 159 aa10.95□□□□□ -0.66
VAMP1-207ENST00000539047 NRACQ8N912 160 aa10.95□□□□□ -0.66
VAMP1-207ENST00000539047 RPL39LQ96EH5 51 aaKnown RBP10.95□□□□□ -0.66
VAMP1-207ENST00000539047 TRBV6-4A0A1B0GX49 114 aa10.94□□□□□ -0.66
VAMP1-207ENST00000539047 GATA1P15976 413 aaPredicted RBP10.94□□□□□ -0.66
VAMP1-207ENST00000539047 RPL36AP83881 106 aaKnown RBP10.94□□□□□ -0.66
VAMP1-207ENST00000539047 RPL36ALQ969Q0 106 aaKnown RBP10.94□□□□□ -0.66
VAMP1-207ENST00000539047 CHCHD1Q96BP2 118 aaKnown RBP10.94□□□□□ -0.66
VAMP1-207ENST00000539047 SMIM2Q9BVW6 85 aa10.94□□□□□ -0.66
VAMP1-207ENST00000539047 TRBV6-5A0A0K0K1A5 114 aa10.93□□□□□ -0.66
VAMP1-207ENST00000539047 TCAPO15273 167 aa10.93□□□□□ -0.66
VAMP1-207ENST00000539047 HSBP1O75506 76 aa10.93□□□□□ -0.66
VAMP1-207ENST00000539047 HTN3P15516 51 aa10.93□□□□□ -0.66
VAMP1-207ENST00000539047 S100A2P29034 98 aa10.93□□□□□ -0.66
VAMP1-207ENST00000539047 COA6Q5JTJ3 125 aaKnown RBP10.93□□□□□ -0.66
VAMP1-207ENST00000539047 C11orf45Q8TAV5 145 aa10.93□□□□□ -0.66
VAMP1-207ENST00000539047 KIR2DL4Q99706 377 aa10.93□□□□□ -0.66
VAMP1-207ENST00000539047 AP5S1Q9NUS5 200 aa10.93□□□□□ -0.66
VAMP1-207ENST00000539047 SERF1AO75920 110 aa10.92□□□□□ -0.66
VAMP1-207ENST00000539047 GAS8-AS1O95177 125 aa10.92□□□□□ -0.66
VAMP1-207ENST00000539047 RPL32P62910 135 aaKnown RBP10.92□□□□□ -0.66
VAMP1-207ENST00000539047 Q8N8P6 123 aa10.92□□□□□ -0.66
VAMP1-207ENST00000539047 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
VAMP1-207ENST00000539047 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
VAMP1-207ENST00000539047 HHLA3Q9XRX5 114 aa10.92□□□□□ -0.66
VAMP1-207ENST00000539047 SDHAF1A6NFY7 115 aa10.91□□□□□ -0.66
VAMP1-207ENST00000539047 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
VAMP1-207ENST00000539047 F5H768 121 aa10.91□□□□□ -0.66
VAMP1-207ENST00000539047 K7EMI3 77 aa10.91□□□□□ -0.66
VAMP1-207ENST00000539047 VCYO14598 125 aa10.91□□□□□ -0.66
VAMP1-207ENST00000539047 LINC00614P0C842 121 aa10.91□□□□□ -0.66
VAMP1-207ENST00000539047 IFI27P40305 119 aaPredicted RBP10.91□□□□□ -0.66
VAMP1-207ENST00000539047 FHL2Q14192 279 aa10.91□□□□□ -0.66
VAMP1-207ENST00000539047 NIT1Q86X76 327 aa10.91□□□□□ -0.66
VAMP1-207ENST00000539047 FCER1GP30273 86 aa10.9□□□□□ -0.66
VAMP1-207ENST00000539047 SNRPEP62304 92 aaKnown RBP10.9□□□□□ -0.66
VAMP1-207ENST00000539047 C12orf74Q32Q52 190 aa10.9□□□□□ -0.66
VAMP1-207ENST00000539047 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
VAMP1-207ENST00000539047 TMEM70Q9BUB7 260 aa10.9□□□□□ -0.66
VAMP1-207ENST00000539047 TRBV7-3A0A075B6L6 115 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 PAX4O43316 350 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 P0DMU3 169 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 FAM231AP0DMU4 169 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 FAM231CP0DMU5 169 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 G0S2P27469 103 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 ORMDL2Q53FV1 153 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 Q6ZSN1 163 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 ZNRF2Q8NHG8 242 aa10.89□□□□□ -0.67
VAMP1-207ENST00000539047 C5orf52A6NGY3 159 aa10.88□□□□□ -0.67
VAMP1-207ENST00000539047 I3L3M4 83 aa10.88□□□□□ -0.67
VAMP1-207ENST00000539047 CRYBA4P53673 196 aa10.88□□□□□ -0.67
VAMP1-207ENST00000539047 TMEM18Q96B42 140 aa10.88□□□□□ -0.67
VAMP1-207ENST00000539047 DNAH3Q8TD57 4116 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 TRBV27A0A0K0K1C4 114 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 GAGE12JA6NER3 117 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 ESDP10768 282 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 HOXA5P20719 270 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 AMTP48728 403 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 GAGE1Q13065 139 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 GAGE4Q13068 117 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 GAGE5Q13069 117 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 LAGE3Q14657 143 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 GAGE13Q4V321 117 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 PDZD11Q5EBL8 140 aa10.87□□□□□ -0.67
VAMP1-207ENST00000539047 DAZ4Q86SG3 579 aaKnown RBP10.87□□□□□ -0.67
VAMP1-207ENST00000539047 DAZ3Q9NR90 486 aaKnown RBP10.87□□□□□ -0.67
VAMP1-207ENST00000539047 GYPEP15421 78 aa10.86□□□□□ -0.67
VAMP1-207ENST00000539047 POLR2KP53803 58 aaKnown RBP10.86□□□□□ -0.67
VAMP1-207ENST00000539047 NANOS2P60321 138 aaKnown RBP10.86□□□□□ -0.67
VAMP1-207ENST00000539047 COTL1Q14019 142 aa10.86□□□□□ -0.67
VAMP1-207ENST00000539047 Q6ZTC4 211 aa10.86□□□□□ -0.67
VAMP1-207ENST00000539047 NBEAL2Q6ZNJ1 2754 aa10.85□□□□□ -0.67
VAMP1-207ENST00000539047 TRAV26-1A0A087WT03 109 aa10.85□□□□□ -0.67
VAMP1-207ENST00000539047 TRAV10A0A0B4J240 114 aa10.85□□□□□ -0.67
VAMP1-207ENST00000539047 LINC01549A6NIU2 74 aa10.85□□□□□ -0.67
VAMP1-207ENST00000539047 NUDT3O95989 172 aa10.85□□□□□ -0.67
VAMP1-207ENST00000539047 TMEM97Q5BJF2 176 aa10.85□□□□□ -0.67
VAMP1-207ENST00000539047 SH2D6Q7Z4S9 175 aa10.85□□□□□ -0.67
VAMP1-207ENST00000539047 HIST3H2BBQ8N257 126 aa10.85□□□□□ -0.67
VAMP1-207ENST00000539047 IGLV2-18A0A075B6J9 118 aa10.84□□□□□ -0.67
VAMP1-207ENST00000539047 DEFB131BA0A096LNP1 70 aa10.84□□□□□ -0.67
VAMP1-207ENST00000539047 LINC01546A6NGU7 62 aa10.84□□□□□ -0.67
VAMP1-207ENST00000539047 HBDP02042 147 aa10.84□□□□□ -0.67
VAMP1-207ENST00000539047 UBE2D3P61077 147 aa10.84□□□□□ -0.67
VAMP1-207ENST00000539047 UBE2D2P62837 147 aa10.84□□□□□ -0.67
VAMP1-207ENST00000539047 NEGR1Q7Z3B1 354 aa10.84□□□□□ -0.67
VAMP1-207ENST00000539047 ICOSQ9Y6W8 199 aa10.84□□□□□ -0.67
VAMP1-207ENST00000539047 IGHV1-24A0A0C4DH33 117 aa10.83□□□□□ -0.68
VAMP1-207ENST00000539047 A0A0J9YY99 117 aa10.83□□□□□ -0.68
VAMP1-207ENST00000539047 BTF3P20290 206 aaKnown RBP10.83□□□□□ -0.68
VAMP1-207ENST00000539047 LINC00310P59036 64 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms