RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 BEAN1Q3B7T3 259 aa15.01□□□□□ -0.01
SMPDL3A-203ENST00000539041 BOD1L2Q8IYS8 172 aa15.01□□□□□ -0.01
SMPDL3A-203ENST00000539041 C1orf158Q8N1D5 194 aa15.01□□□□□ -0.01
SMPDL3A-203ENST00000539041 NEXN-AS1Q8NBZ9 246 aa15.01□□□□□ -0.01
SMPDL3A-203ENST00000539041 TMEM208Q9BTX3 173 aa15.01□□□□□ -0.01
SMPDL3A-203ENST00000539041 TCTAP57738 103 aa15□□□□□ -0.01
SMPDL3A-203ENST00000539041 F8VRH5 84 aa14.99□□□□□ -0.01
SMPDL3A-203ENST00000539041 UFSP1Q6NVU6 142 aa14.99□□□□□ -0.01
SMPDL3A-203ENST00000539041 C2orf91Q6ZV80 131 aa14.99□□□□□ -0.01
SMPDL3A-203ENST00000539041 BAALCQ8WXS3 180 aa14.99□□□□□ -0.01
SMPDL3A-203ENST00000539041 TP53TG1Q9Y2A0 90 aa14.99□□□□□ -0.01
SMPDL3A-203ENST00000539041 DLEU1O43261 78 aa14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 PLNP26678 52 aa14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 NMUP48645 174 aa14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 CHTOPQ9Y3Y2 248 aaKnown RBP14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 BAHCC1Q9P281 2608 aa14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 PF4P02776 101 aa14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 FOSL1P15407 271 aa14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 RHOHQ15669 191 aa14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 ZC2HC1BQ5TFG8 222 aa14.98□□□□□ -0.01
SMPDL3A-203ENST00000539041 IGHV3-73A0A0B4J1V6 119 aa14.97□□□□□ -0.01
SMPDL3A-203ENST00000539041 MPV17L2Q567V2 206 aa14.97□□□□□ -0.01
SMPDL3A-203ENST00000539041 DEFB104AQ8WTQ1 72 aa14.97□□□□□ -0.01
SMPDL3A-203ENST00000539041 C19orf73Q9NVV2 129 aa14.97□□□□□ -0.01
SMPDL3A-203ENST00000539041 IGHV3OR16-12A0A075B7B8 117 aa14.96□□□□□ -0.01
SMPDL3A-203ENST00000539041 I3L3M4 83 aa14.96□□□□□ -0.01
SMPDL3A-203ENST00000539041 RHODO00212 210 aa14.96□□□□□ -0.01
SMPDL3A-203ENST00000539041 AZU1P20160 251 aa14.96□□□□□ -0.01
SMPDL3A-203ENST00000539041 CFAP126Q5VTH2 177 aa14.96□□□□□ -0.01
SMPDL3A-203ENST00000539041 C12orf54Q6X4T0 127 aa14.96□□□□□ -0.01
SMPDL3A-203ENST00000539041 GTSCR1Q86UQ5 136 aa14.96□□□□□ -0.01
SMPDL3A-203ENST00000539041 MRPL16Q9NX20 251 aaKnown RBP14.96□□□□□ -0.01
SMPDL3A-203ENST00000539041 IGIPA6NJ69 53 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 SIVA1O15304 175 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 RS1O15537 224 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 RPL39P62891 51 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 PCP2Q8IVA1 136 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 LINC00482Q8N8I6 264 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 IL17DQ8TAD2 202 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 TMEM141Q96I45 108 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 TIMM17AQ99595 171 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 WFDC10AQ9H1F0 79 aa14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 SETXQ7Z333 2677 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-203ENST00000539041 IGKV2D-26A0A0A0MRZ7 120 aa14.94□□□□□ -0.02
SMPDL3A-203ENST00000539041 TSHBP01222 138 aa14.94□□□□□ -0.02
SMPDL3A-203ENST00000539041 BVES-AS1Q5T3Y7 98 aa14.94□□□□□ -0.02
SMPDL3A-203ENST00000539041 PRSS29PA6NIE9 313 aa14.93□□□□□ -0.02
SMPDL3A-203ENST00000539041 SETD2Q9BYW2 2564 aaPredicted RBP14.92□□□□□ -0.02
SMPDL3A-203ENST00000539041 P0DMU3 169 aa14.92□□□□□ -0.02
SMPDL3A-203ENST00000539041 FAM231AP0DMU4 169 aa14.92□□□□□ -0.02
SMPDL3A-203ENST00000539041 FAM231CP0DMU5 169 aa14.92□□□□□ -0.02
SMPDL3A-203ENST00000539041 RNASE8Q8TDE3 154 aaKnown RBP14.92□□□□□ -0.02
SMPDL3A-203ENST00000539041 TMEM263Q8WUH6 116 aaKnown RBP14.91□□□□□ -0.02
SMPDL3A-203ENST00000539041 TNFRSF18Q9Y5U5 241 aa14.91□□□□□ -0.02
SMPDL3A-203ENST00000539041 CRLF1O75462 422 aa14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 GIG44P09565 113 aaPredicted RBP14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 RPL35AP18077 110 aaKnown RBP14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 IGHV3-53P01767 116 aa14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 PMVKQ15126 192 aa14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 TMEM97Q5BJF2 176 aa14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 Q6ZSN1 163 aa14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 C20orf203Q8NBC4 194 aa14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 C1QTNF4Q9BXJ3 329 aa14.9□□□□□ -0.02
SMPDL3A-203ENST00000539041 OTOGQ6ZRI0 2925 aa14.89□□□□□ -0.03
SMPDL3A-203ENST00000539041 DNAJC30Q96LL9 226 aa14.88□□□□□ -0.03
SMPDL3A-203ENST00000539041 ZNF25P17030 456 aaPredicted RBP14.88□□□□□ -0.03
SMPDL3A-203ENST00000539041 TRGV1A0A0A0MS02 117 aa14.87□□□□□ -0.03
SMPDL3A-203ENST00000539041 HSD52Q0P140 79 aa14.87□□□□□ -0.03
SMPDL3A-203ENST00000539041 ZMAT5Q9UDW3 170 aaKnown RBP14.87□□□□□ -0.03
SMPDL3A-203ENST00000539041 PAPPA-AS1Q5QFB9 102 aa14.86□□□□□ -0.03
SMPDL3A-203ENST00000539041 LINC00469Q8N7U9 141 aa14.86□□□□□ -0.03
SMPDL3A-203ENST00000539041 TTTY13Q9BZ97 58 aa14.86□□□□□ -0.03
SMPDL3A-203ENST00000539041 CST9LQ9H4G1 147 aa14.86□□□□□ -0.03
SMPDL3A-203ENST00000539041 HIGD1BQ9P298 99 aa14.86□□□□□ -0.03
SMPDL3A-203ENST00000539041 OR4C5Q8NGB2 326 aa14.85□□□□□ -0.03
SMPDL3A-203ENST00000539041 C16orf74Q96GX8 76 aa14.85□□□□□ -0.03
SMPDL3A-203ENST00000539041 IGLV4-69A0A075B6H9 119 aa14.85□□□□□ -0.03
SMPDL3A-203ENST00000539041 FN1P02751 2386 aaKnown RBP14.84□□□□□ -0.03
SMPDL3A-203ENST00000539041 CSNK1G2-AS1Q8NCQ2 148 aa14.84□□□□□ -0.03
SMPDL3A-203ENST00000539041 NSD1Q96L73 2696 aaPredicted RBP14.84□□□□□ -0.03
SMPDL3A-203ENST00000539041 INSL3P51460 131 aa14.83□□□□□ -0.03
SMPDL3A-203ENST00000539041 C9orf66Q5T8R8 295 aa14.83□□□□□ -0.03
SMPDL3A-203ENST00000539041 Q9UF83 564 aa14.83□□□□□ -0.03
SMPDL3A-203ENST00000539041 TRAV8-6A0A0B4J262 113 aa14.83□□□□□ -0.04
SMPDL3A-203ENST00000539041 C11orf86A6NJI1 115 aa14.83□□□□□ -0.04
SMPDL3A-203ENST00000539041 SEC11AP67812 179 aa14.83□□□□□ -0.04
SMPDL3A-203ENST00000539041 DAZ2Q13117 558 aaKnown RBP14.83□□□□□ -0.04
SMPDL3A-203ENST00000539041 Q6ZTI0 123 aa14.83□□□□□ -0.04
SMPDL3A-203ENST00000539041 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.83□□□□□ -0.04
SMPDL3A-203ENST00000539041 TRAV4A0A0B4J268 109 aa14.82□□□□□ -0.04
SMPDL3A-203ENST00000539041 E9PLD3 99 aa14.82□□□□□ -0.04
SMPDL3A-203ENST00000539041 MAPKAPK5-AS1Q8N8E1 139 aa14.82□□□□□ -0.04
SMPDL3A-203ENST00000539041 OR11H2Q8NH07 326 aa14.82□□□□□ -0.04
SMPDL3A-203ENST00000539041 COX11Q9Y6N1 276 aa14.82□□□□□ -0.04
SMPDL3A-203ENST00000539041 NOTCH2Q04721 2471 aa14.82□□□□□ -0.04
SMPDL3A-203ENST00000539041 C2CD3Q4AC94 2353 aa14.81□□□□□ -0.04
SMPDL3A-203ENST00000539041 TRBV25-1A0A075B6N4 114 aa14.81□□□□□ -0.04
SMPDL3A-203ENST00000539041 ORAOV1Q8WV07 137 aa14.81□□□□□ -0.04
SMPDL3A-203ENST00000539041 NOP10Q9NPE3 64 aaKnown RBP14.81□□□□□ -0.04
SMPDL3A-203ENST00000539041 PLAC8L1A1L4L8 177 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms