RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 GAGE12JA6NER3 117 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 NPYP01303 97 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 GATA1P15976 413 aaPredicted RBP7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 GAGE1Q13065 139 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 GAGE4Q13068 117 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 GAGE5Q13069 117 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 RHOHQ15669 191 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 C12orf74Q32Q52 190 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 RNASEKQ6P5S7 137 aaKnown RBP7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 POM121L12Q8N7R1 296 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 ZNRF2Q8NHG8 242 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 RPL39LQ96EH5 51 aaKnown RBP7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 DNAJC30Q96LL9 226 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 PRO0255Q9UI72 69 aa7.57□□□□□ -1.2
TNFRSF1A-211ENST00000538363 A0A0J9YY99 117 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 TRBV6-4A0A1B0GX49 114 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 PHOX2AO14813 284 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 FCER1GP30273 86 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 FHL2Q14192 279 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 IQCJQ1A5X6 159 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 LINC00612Q8N6U2 182 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 C18orf15Q96N68 181 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 KIR2DL4Q99706 377 aa7.56□□□□□ -1.2
TNFRSF1A-211ENST00000538363 NACAE9PAV3 2078 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 DEFB131BA0A096LNP1 70 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 TRAV10A0A0B4J240 114 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 TRBV10-1A0A0K0K1A3 114 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 M0QY20 66 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 VCYO14598 125 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BKO60814 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BJP06899 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 GYPEP15421 78 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BOP23527 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BBP33778 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BDP58876 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 LINC00315P59091 139 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BCP62807 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST2H2BEQ16778 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 SLC25A29Q8N8R3 303 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BHQ93079 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BNQ99877 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HIST1H2BMQ99879 126 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 C20orf78Q9BR46 151 aa7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 NXT2Q9NPJ8 142 aaKnown RBP7.55□□□□□ -1.2
TNFRSF1A-211ENST00000538363 TRBV7-3A0A075B6L6 115 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 TRAV26-1A0A087WT03 109 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HSBP1O75506 76 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 P0DMU3 169 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 FAM231AP0DMU4 169 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 FAM231CP0DMU5 169 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 S100A2P29034 98 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 CRYBA4P53673 196 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 UFSP1Q6NVU6 142 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 Q6ZSN1 163 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 Q6ZTC4 211 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 NIT1Q86X76 327 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 C18orf32Q8TCD1 76 aa7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 PHLDA1Q8WV24 401 aaPredicted RBP7.54□□□□□ -1.2
TNFRSF1A-211ENST00000538363 SDHAF1A6NFY7 115 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 I3L3M4 83 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 GAS8-AS1O95177 125 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 NUDT3O95989 172 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 LINC00614P0C842 121 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 HOXA5P20719 270 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 IFI27P40305 119 aaPredicted RBP7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 Q0VG73 95 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 Q8N8P6 123 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 ICOSQ9Y6W8 199 aa7.53□□□□□ -1.2
TNFRSF1A-211ENST00000538363 TCAPO15273 167 aa7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 G0S2P27469 103 aa7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 COTL1Q14019 142 aa7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 MRPL23Q16540 153 aaKnown RBP7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 SH2D6Q7Z4S9 175 aa7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 NRACQ8N912 160 aa7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 NEXN-AS1Q8NBZ9 246 aa7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 ATP6V0E2Q8NHE4 81 aa7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 SMIM2Q9BVW6 85 aa7.52□□□□□ -1.21
TNFRSF1A-211ENST00000538363 PRKDCP78527 4128 aaKnown RBP7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 LOC100131303A0A0U1RQF7 123 aa7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 LAGE3Q14657 143 aa7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 NEGR1Q7Z3B1 354 aa7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 DEFB104AQ8WTQ1 72 aa7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 CHCHD1Q96BP2 118 aaKnown RBP7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 EDA2RQ9HAV5 297 aa7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 AP5S1Q9NUS5 200 aa7.51□□□□□ -1.21
TNFRSF1A-211ENST00000538363 TGP01266 2768 aa7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 TENM3Q9P273 2699 aa7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 A0A096LPF7 62 aa7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 TRBV6-5A0A0K0K1A5 114 aa7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 SERF1AO75920 110 aa7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 BTF3P20290 206 aaKnown RBP7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
TNFRSF1A-211ENST00000538363 TMEM97Q5BJF2 176 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms