RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	KIR2DL5A	Q8N109	375 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	C14orf178	Q8N769	122 aa	Predicted RBP	3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983		Q8N8P6	123 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	SPX	Q9BT56	116 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	TMEM70	Q9BUB7	260 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	MCRIP2	Q9BUT9	160 aa	Known RBP	3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	SMIM2	Q9BVW6	85 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	C1QTNF4	Q9BXJ3	329 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	MDFIC	Q9P1T7	246 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	PAM16	Q9Y3D7	125 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	KIF25-AS1	Q9Y6Z4	181 aa		3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	FN1	P02751	2386 aa	Known RBP	3.99	□□□□□ -1.77
NPIPB3-208	ENST00000537983	MTOR	P42345	2549 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	IGLV2-18	A0A075B6J9	118 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983		A0A096LNJ9	63 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	IGLV5-52	A0A0A0MRZ9	124 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	TRAV26-2	A0A0B4J265	109 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	LOC389332	A0A1B0GUA5	103 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983		A8MWV9	139 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983		M0R2P5	195 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	GAS8-AS1	O95177	125 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	GATA1	P15976	413 aa	Predicted RBP	3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	LINC00315	P59091	139 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	PKIA	P61925	76 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	PET117	Q6UWS5	81 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	GTSCR1	Q86UQ5	136 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983		Q8N976	141 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	RASL10A	Q92737	203 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	LINC01587	Q99440	93 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	MAP1LC3C	Q9BXW4	147 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	EDA2R	Q9HAV5	297 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	GOLT1B	Q9Y3E0	138 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	AGRN	O00468	2067 aa		3.98	□□□□□ -1.77
NPIPB3-208	ENST00000537983	TRBV6-5	A0A0K0K1A5	114 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	LINC01549	A6NIU2	74 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	PCP4L1	A6NKN8	68 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	SYS1-DBNDD2	H3BUS1	97 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983		H7C1H1	209 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	VCY	O14598	125 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	FCER1G	P30273	86 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	NANOS2	P60321	138 aa	Known RBP	3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	LAGE3	Q14657	143 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	ZNF56	Q15929	161 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	ZNF876P	Q49A33	203 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	ORMDL2	Q53FV1	153 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	SPATA12	Q7Z6I5	190 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	C1orf158	Q8N1D5	194 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	C11orf72	Q8NBR9	251 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	TMEM263	Q8WUH6	116 aa	Known RBP	3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	ZNF479	Q96JC4	524 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	TMEM208	Q9BTX3	173 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	VAMP8	Q9BV40	100 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	XCL2	Q9UBD3	114 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	MUC4	Q99102	2169 aa		3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	NSD1	Q96L73	2696 aa	Predicted RBP	3.97	□□□□□ -1.77
NPIPB3-208	ENST00000537983	NOTCH2	Q04721	2471 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	TCAP	O15273	167 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	ATP5L	O75964	103 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	CRYGD	P07320	174 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	IGHV4-30-4	P0DP06	118 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	G0S2	P27469	103 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	LGALS9B	Q3B8N2	356 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	PAPPA-AS1	Q5QFB9	102 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	FAM74A4	Q5TZK3	123 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	LINC01545	Q5VT33	79 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	LGALS9C	Q6DKI2	356 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	UFSP1	Q6NVU6	142 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	LINC00173	Q6ZV60	143 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	ZNF664	Q8N3J9	261 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	RNASE8	Q8TDE3	154 aa	Known RBP	3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	TMEM158	Q8WZ71	300 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	IFI27L1	Q96BM0	104 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	RPL39L	Q96EH5	51 aa	Known RBP	3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	C16orf74	Q96GX8	76 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	WFDC10A	Q9H1F0	79 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	JPT2	Q9H910	190 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	ST20	Q9HBF5	79 aa		3.96	□□□□□ -1.78
NPIPB3-208	ENST00000537983	C2CD3	Q4AC94	2353 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	TRAV9-2	A0A087WT02	112 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	TRBV27	A0A0K0K1C4	114 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983		M0QY20	66 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	RS1	O15537	224 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	GAGE7	O76087	117 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	GIG44	P09565	113 aa	Predicted RBP	3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	GAGE12F	P0CL80	117 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	GAGE12G	P0CL81	117 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	GAGE12I	P0CL82	117 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	HTN1	P15515	57 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	RPL35A	P18077	110 aa	Known RBP	3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	KRTAP10-11	P60412	298 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	GAGE1	Q13065	139 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	GAGE4	Q13068	117 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	RHOH	Q15669	191 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	KRTAP24-1	Q3LI83	254 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	ZFP2	Q6ZN57	461 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	ZNF705A	Q6ZN79	300 aa	Predicted RBP	3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	WFDC9	Q8NEX5	89 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	KIR2DL4	Q99706	377 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	CSTL1	Q9H114	145 aa		3.95	□□□□□ -1.78
NPIPB3-208	ENST00000537983	F8	P00451	2351 aa		3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms