RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 KRTAP10-9P60411 292 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 LYPD2Q6UXB3 125 aa8.27□□□□□ -1.09
CLSTN3-207ENST00000537408 TMEM223A0PJW6 202 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 INAFM2P0DMQ5 153 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 EEF1AKMT3Q96AZ1 226 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 PKIGQ9Y2B9 76 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 NPC2P61916 151 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 LY6EQ16553 131 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 RUSC1-AS1Q66K80 236 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 TMEM200BQ69YZ2 307 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 CLEC2BQ92478 149 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 MYO15AQ9UKN7 3530 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 TRIOO75962 3097 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 GATA4P43694 442 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 UBE2E1P51965 193 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 AGPAT4-IT1Q9H0P7 198 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 F5H697 171 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
CLSTN3-207ENST00000537408 C2orf48Q96LS8 159 aa8.25□□□□□ -1.09
CLSTN3-207ENST00000537408 CFHR4Q92496 578 aa8.25□□□□□ -1.09
CLSTN3-207ENST00000537408 IGKV1-17P01599 117 aa8.25□□□□□ -1.09
CLSTN3-207ENST00000537408 IGLV2-23P01705 113 aa8.25□□□□□ -1.09
CLSTN3-207ENST00000537408 Q5XG85 94 aa8.25□□□□□ -1.09
CLSTN3-207ENST00000537408 ZNF491Q8N8L2 437 aa8.25□□□□□ -1.09
CLSTN3-207ENST00000537408 TP53TG1Q9Y2A0 90 aa8.25□□□□□ -1.09
CLSTN3-207ENST00000537408 C14orf178Q8N769 122 aaPredicted RBP8.24□□□□□ -1.09
CLSTN3-207ENST00000537408 DPH3P1Q9H4G8 78 aa8.24□□□□□ -1.09
CLSTN3-207ENST00000537408 TPSG1Q9NRR2 321 aa8.24□□□□□ -1.09
CLSTN3-207ENST00000537408 IGHV4-61A0A0C4DH41 118 aa8.24□□□□□ -1.09
CLSTN3-207ENST00000537408 TSPEAR-AS2P59090 65 aa8.24□□□□□ -1.09
CLSTN3-207ENST00000537408 SDHAF1A6NFY7 115 aa8.24□□□□□ -1.09
CLSTN3-207ENST00000537408 RHOHQ15669 191 aa8.24□□□□□ -1.09
CLSTN3-207ENST00000537408 SPEGQ15772 3267 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 IGLV4-69A0A075B6H9 119 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 RS1O15537 224 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 IGHV1-8P0DP01 117 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 RPL35AP18077 110 aaKnown RBP8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 FAM19A4Q96LR4 140 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 TLN2Q9Y4G6 2542 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 LINC00574Q9H8X3 128 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 EYSQ5T1H1 3165 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 NDUFC2-KCTD14E9PQ53 114 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 LY6G6DO95868 133 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 IGHV3OR16-13A0A075B7E8 117 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 IGHV3-74A0A0B4J1X5 117 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 M0R381 172 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 NDUFC2O95298 119 aa8.23□□□□□ -1.09
CLSTN3-207ENST00000537408 TRBV7-1A0A0A6YYK4 115 aa8.22□□□□□ -1.09
CLSTN3-207ENST00000537408 I3L2K1 104 aa8.22□□□□□ -1.09
CLSTN3-207ENST00000537408 IGHV3-23P01764 117 aa8.22□□□□□ -1.09
CLSTN3-207ENST00000537408 INAFM1C9JVW0 142 aa8.22□□□□□ -1.09
CLSTN3-207ENST00000537408 C16orf92Q96LL3 132 aa8.22□□□□□ -1.09
CLSTN3-207ENST00000537408 IGHV3OR16-8A0A075B7F1 116 aa8.22□□□□□ -1.09
CLSTN3-207ENST00000537408 DAND5Q8N907 189 aa8.22□□□□□ -1.09
CLSTN3-207ENST00000537408 NBR2O15453 112 aa8.21□□□□□ -1.09
CLSTN3-207ENST00000537408 SPRY2O43597 315 aa8.21□□□□□ -1.09
CLSTN3-207ENST00000537408 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.09
CLSTN3-207ENST00000537408 COPS9Q8WXC6 57 aa8.21□□□□□ -1.09
CLSTN3-207ENST00000537408 TRAV12-3A0A0B4J271 114 aa8.21□□□□□ -1.1
CLSTN3-207ENST00000537408 DNAL4O96015 105 aa8.21□□□□□ -1.1
CLSTN3-207ENST00000537408 SMCR5Q8TEV8 140 aa8.21□□□□□ -1.1
CLSTN3-207ENST00000537408 TIMM17AQ99595 171 aa8.21□□□□□ -1.1
CLSTN3-207ENST00000537408 A0A0J9YX75 114 aa8.21□□□□□ -1.1
CLSTN3-207ENST00000537408 PF4P02776 101 aa8.21□□□□□ -1.1
CLSTN3-207ENST00000537408 TIMM21Q9BVV7 248 aa8.21□□□□□ -1.1
CLSTN3-207ENST00000537408 IGHV4-4A0A075B6R2 117 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 RNF182Q8N6D2 247 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 USP9XQ93008 2570 aaPredicted RBP8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 IGHV3-64A0A075B6Q5 118 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 IGKV3D-20A0A0C4DH25 116 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 I3L3M4 83 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 RPL39LQ96EH5 51 aaKnown RBP8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 PHLDA3Q9Y5J5 127 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 IGHV3-49A0A0A0MS15 119 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 EIF4EBP3O60516 100 aaPredicted RBP8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 C1orf195Q5TG92 126 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 TMEM243Q9BU79 118 aa8.2□□□□□ -1.1
CLSTN3-207ENST00000537408 MTORP42345 2549 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 A0A0J9YXY3 114 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 HIST1H4AP62805 103 aaKnown RBP8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 IGFL4Q6B9Z1 124 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 VMO1Q7Z5L0 202 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 DYNAPQ8N1N2 210 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 FAM236DA0A1B0GTK5 79 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 M0R1W7 72 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 FAM236CP0DP71 79 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 C9orf85Q96MD7 179 aa8.19□□□□□ -1.1
CLSTN3-207ENST00000537408 MSMPQ1L6U9 139 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 NSUN5P1Q3KNT7 163 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 DCANP1Q8TF63 244 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 AMELXQ99217 191 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 DSCAML1Q8TD84 2053 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 VCYO14598 125 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 LHBP01229 141 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 ZNF876PQ49A33 203 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 LINC00311Q8N616 119 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 IGHV3-66A0A0C4DH42 116 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 HTN1P15515 57 aa8.18□□□□□ -1.1
CLSTN3-207ENST00000537408 IGHV1-3A0A0C4DH29 117 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms