RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 CUBNO60494 3623 aa6.79□□□□□ -1.32
UBE3B-207ENST00000537063 ZNF415Q09FC8 603 aa6.79□□□□□ -1.32
UBE3B-207ENST00000537063 IL17DQ8TAD2 202 aa6.79□□□□□ -1.32
UBE3B-207ENST00000537063 CHAC1Q9BUX1 264 aa6.79□□□□□ -1.32
UBE3B-207ENST00000537063 A6NDN8 102 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 SCGB2A2Q13296 93 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 MAPKAPK5-AS1Q8N8E1 139 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 A8MWV9 139 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 E9PLD3 99 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 H3BRM9 83 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 NDUFA7O95182 113 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 INSP01308 110 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 BEAN1Q3B7T3 259 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 CITED2Q99967 270 aaPredicted RBP6.78□□□□□ -1.32
UBE3B-207ENST00000537063 P0DMU3 169 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 FAM231AP0DMU4 169 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 FAM231CP0DMU5 169 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 HILS1P60008 231 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 RPL39P62891 51 aaKnown RBP6.78□□□□□ -1.32
UBE3B-207ENST00000537063 PMVKQ15126 192 aa6.78□□□□□ -1.32
UBE3B-207ENST00000537063 TAL2Q16559 108 aa6.77□□□□□ -1.32
UBE3B-207ENST00000537063 SPXQ9BT56 116 aa6.77□□□□□ -1.32
UBE3B-207ENST00000537063 TM2D2Q9BX73 214 aa6.77□□□□□ -1.32
UBE3B-207ENST00000537063 CST9LQ9H4G1 147 aa6.77□□□□□ -1.32
UBE3B-207ENST00000537063 MYO9AB2RTY4 2548 aa6.77□□□□□ -1.33
UBE3B-207ENST00000537063 ADARB2-AS1A8MUL3 147 aa6.77□□□□□ -1.33
UBE3B-207ENST00000537063 I3L3M4 83 aa6.77□□□□□ -1.33
UBE3B-207ENST00000537063 PAPPA-AS1Q5QFB9 102 aa6.77□□□□□ -1.33
UBE3B-207ENST00000537063 CFAP126Q5VTH2 177 aa6.76□□□□□ -1.33
UBE3B-207ENST00000537063 C20orf203Q8NBC4 194 aa6.76□□□□□ -1.33
UBE3B-207ENST00000537063 FAM110AQ9BQ89 295 aa6.76□□□□□ -1.33
UBE3B-207ENST00000537063 C9orf118A6NHY6 69 aa6.76□□□□□ -1.33
UBE3B-207ENST00000537063 TRAV8-6A0A0B4J262 113 aa6.76□□□□□ -1.33
UBE3B-207ENST00000537063 A0A1W2PRX2 142 aa6.76□□□□□ -1.33
UBE3B-207ENST00000537063 C11orf86A6NJI1 115 aa6.76□□□□□ -1.33
UBE3B-207ENST00000537063 PTTG1IPP53801 180 aa6.76□□□□□ -1.33
UBE3B-207ENST00000537063 MYMXA0A1B0GTQ4 84 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 RHODO00212 210 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 RS1O15537 224 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 NFE4Q86UQ8 179 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 CEND1Q8N111 149 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 SORL1Q92673 2214 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 OR11H12B2RN74 326 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 PRM2P04554 102 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 FXYD2P54710 66 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 C1orf158Q8N1D5 194 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 OR11H2Q8NH07 326 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 TLN2Q9Y4G6 2542 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 UNC79Q9P2D8 2635 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 TRBV7-3A0A075B6L6 115 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 PROK1P58294 105 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 C11orf44Q8N8P7 122 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 PHLDA1Q8WV24 401 aaPredicted RBP6.75□□□□□ -1.33
UBE3B-207ENST00000537063 LINC01587Q99440 93 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 PYGO1Q9Y3Y4 419 aa6.75□□□□□ -1.33
UBE3B-207ENST00000537063 CMC4P56277 68 aaPredicted RBP6.74□□□□□ -1.33
UBE3B-207ENST00000537063 VAMP3Q15836 100 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 Q6ZSN1 163 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 ZNF418Q8TF45 676 aaPredicted RBP6.74□□□□□ -1.33
UBE3B-207ENST00000537063 FAM104AQ969W3 186 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 PRADC1Q9BSG0 188 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 IGLV1-51P01701 117 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 IGHV3-53P01767 116 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 STHQ8IWL8 128 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 ZNRF2Q8NHG8 242 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 DNAJC30Q96LL9 226 aa6.74□□□□□ -1.33
UBE3B-207ENST00000537063 ITPR2Q14571 2701 aa6.73□□□□□ -1.33
UBE3B-207ENST00000537063 CRYBA4P53673 196 aa6.73□□□□□ -1.33
UBE3B-207ENST00000537063 AMMECR1LQ6DCA0 310 aa6.73□□□□□ -1.33
UBE3B-207ENST00000537063 RNASE8Q8TDE3 154 aaKnown RBP6.73□□□□□ -1.33
UBE3B-207ENST00000537063 C19orf73Q9NVV2 129 aa6.73□□□□□ -1.33
UBE3B-207ENST00000537063 K7EP13 123 aa6.73□□□□□ -1.33
UBE3B-207ENST00000537063 HTN1P15515 57 aa6.73□□□□□ -1.33
UBE3B-207ENST00000537063 SONP18583 2426 aaKnown RBP6.73□□□□□ -1.33
UBE3B-207ENST00000537063 NF1P21359 2839 aa6.73□□□□□ -1.33
UBE3B-207ENST00000537063 IGLV4-3A0A075B6K6 122 aa6.72□□□□□ -1.33
UBE3B-207ENST00000537063 GIG44P09565 113 aaPredicted RBP6.72□□□□□ -1.33
UBE3B-207ENST00000537063 DEFB104AQ8WTQ1 72 aa6.72□□□□□ -1.33
UBE3B-207ENST00000537063 HELZ2Q9BYK8 2649 aaKnown RBP6.72□□□□□ -1.33
UBE3B-207ENST00000537063 A0A1B0GWB2 263 aa6.72□□□□□ -1.33
UBE3B-207ENST00000537063 AZU1P20160 251 aa6.72□□□□□ -1.33
UBE3B-207ENST00000537063 GCSHP23434 173 aa6.72□□□□□ -1.33
UBE3B-207ENST00000537063 AMELXQ99217 191 aa6.72□□□□□ -1.33
UBE3B-207ENST00000537063 XCL2Q9UBD3 114 aa6.72□□□□□ -1.33
UBE3B-207ENST00000537063 MRPL16Q9NX20 251 aaKnown RBP6.72□□□□□ -1.33
UBE3B-207ENST00000537063 IGHV3-73A0A0B4J1V6 119 aa6.71□□□□□ -1.33
UBE3B-207ENST00000537063 SMIM13P0DJ93 91 aa6.71□□□□□ -1.33
UBE3B-207ENST00000537063 HERVK_113P61574 105 aa6.71□□□□□ -1.33
UBE3B-207ENST00000537063 CHCHD7Q9BUK0 85 aa6.71□□□□□ -1.33
UBE3B-207ENST00000537063 CCDC168Q8NDH2 2452 aa6.71□□□□□ -1.33
UBE3B-207ENST00000537063 OR5A1Q8NGJ0 315 aa6.71□□□□□ -1.34
UBE3B-207ENST00000537063 Q9UF83 564 aa6.71□□□□□ -1.34
UBE3B-207ENST00000537063 TNFRSF18Q9Y5U5 241 aa6.71□□□□□ -1.34
UBE3B-207ENST00000537063 OR4C5Q8NGB2 326 aa6.71□□□□□ -1.34
UBE3B-207ENST00000537063 OPRPNQ99935 248 aaPredicted RBP6.71□□□□□ -1.34
UBE3B-207ENST00000537063 A0A1W2PPM0 123 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 SAP30O75446 220 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 TMEM263Q8WUH6 116 aaKnown RBP6.7□□□□□ -1.34
UBE3B-207ENST00000537063 TMEM223A0PJW6 202 aa6.7□□□□□ -1.34
UBE3B-207ENST00000537063 ZNF815PA8K554 130 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms