RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 C2orf66Q6UXQ4 117 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 SLC25A29Q8N8R3 303 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 SHANK2-AS3Q9BTD1 123 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 MALRD1Q5VYJ5 2156 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 CELSR1Q9NYQ6 3014 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 IGLV4-69A0A075B6H9 119 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 LYZL6O75951 148 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 ADAMTSL4-AS1Q5T5F5 129 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 LCE3BQ5TA77 95 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 C9orf139Q6ZV77 190 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 ITLN2Q8WWU7 325 aaPredicted RBP2.8□□□□□ -1.96
MCF2-210ENST00000536274 UPK3BQ9BT76 320 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 RETNQ9HD89 108 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 TMEM223A0PJW6 202 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 I3L3M4 83 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 M0R1W7 72 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 MGPP08493 103 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 HOXD3P31249 432 aaPredicted RBP2.8□□□□□ -1.96
MCF2-210ENST00000536274 DEFB1P60022 68 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 DGAT2L7PQ6IED9 249 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 AMELXQ99217 191 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 KRTAP9-2Q9BYQ4 174 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 AGPAT4-IT1Q9H0P7 198 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 SIRPDQ9H106 197 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 RNF7Q9UBF6 113 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 ICOSQ9Y6W8 199 aa2.8□□□□□ -1.96
MCF2-210ENST00000536274 MAST4O15021 2626 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 LINC01619G3V211 115 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 M0R381 172 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 FOLR3P41439 243 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 RNASE13Q5GAN3 156 aaKnown RBP2.79□□□□□ -1.96
MCF2-210ENST00000536274 SPINK14Q6IE38 97 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 THAP8Q8NA92 274 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 IGHV3-49A0A0A0MS15 119 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 IGKV3D-20A0A0C4DH25 116 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 LY6LH3BQJ8 138 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 SCRG1O75711 98 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 IGF1P05019 195 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 CCL3L1P16619 93 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 FBXL19-AS1Q494R0 122 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 S100A7L2Q5SY68 101 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 TMEM200BQ69YZ2 307 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 GFRALQ6UXV0 394 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 C9orf47Q6ZRZ4 202 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 Q8IYB0 196 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 Q9HAA7 133 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 PEMTQ9UBM1 199 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 SETXQ7Z333 2677 aaKnown RBP2.79□□□□□ -1.96
MCF2-210ENST00000536274 MED13LQ71F56 2210 aa2.79□□□□□ -1.96
MCF2-210ENST00000536274 TIMM8AO60220 97 aaPredicted RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 LGALS3P17931 250 aaKnown RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 SYNJ2BPP57105 145 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 DAZ2Q13117 558 aaKnown RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 FP248Q71RG6 208 aaPredicted RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 DAZ4Q86SG3 579 aaKnown RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 DYNAPQ8N1N2 210 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 C20orf197Q8N268 126 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 FAM216BQ8N7L0 139 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 MPLKIPQ8TAP9 179 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 C9orf85Q96MD7 179 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 DAZ1Q9NQZ3 744 aaKnown RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 DAZ3Q9NR90 486 aaKnown RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 TP53TG1Q9Y2A0 90 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 PKDREJQ9NTG1 2253 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 LINC01546A6NGU7 62 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 TMEM178BH3BS89 294 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 LHBP01229 141 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 P0DMU3 169 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 FAM231AP0DMU4 169 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 FAM231CP0DMU5 169 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 DLX6P56179 175 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 TIRAPP58753 221 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 TMEM258P61165 79 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 HIST1H4AP62805 103 aaKnown RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 SPANXN1Q5VSR9 72 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 FDCSPQ8NFU4 85 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 ZNF625Q96I27 306 aaPredicted RBP2.78□□□□□ -1.96
MCF2-210ENST00000536274 CCL13Q99616 98 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 SMIM2Q9BVW6 85 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 C16orf95Q9H693 158 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 SPANXA1Q9NS26 97 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 TRAV23DV6A0A075B6W5 121 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 IGHV1-45A0A0A0MS14 117 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 ADORA2A-AS1P86434 159 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 SOSTDC1Q6X4U4 206 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 TOMM6Q96B49 74 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 BPESC1Q9GZL8 116 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 SNURFQ9Y675 71 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 DOPEY1Q5JWR5 2465 aa2.78□□□□□ -1.96
MCF2-210ENST00000536274 TRAV12-1A0A0B4J245 112 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 KRTAP9-6A0A140TA67 174 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 IGKV1-17P01599 117 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 RBM3P98179 157 aaKnown RBP2.77□□□□□ -1.97
MCF2-210ENST00000536274 C5orf38Q86SI9 138 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 LINC00643Q86TS7 51 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 Q8N2B8 174 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 RNASE6Q93091 150 aaKnown RBP2.77□□□□□ -1.97
MCF2-210ENST00000536274 SPTBN2O15020 2390 aa2.77□□□□□ -1.97
MCF2-210ENST00000536274 SPRY3O43610 288 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms