RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 NXT2Q9NPJ8 142 aaKnown RBP16.26■□□□□ 0.19
RBFOX1-206ENST00000535565 DNHD1Q96M86 4753 aa16.26■□□□□ 0.19
RBFOX1-206ENST00000535565 PRSS47A8MTI9 375 aa16.26■□□□□ 0.19
RBFOX1-206ENST00000535565 LINC00614P0C842 121 aa16.26■□□□□ 0.19
RBFOX1-206ENST00000535565 IFI27P40305 119 aaPredicted RBP16.26■□□□□ 0.19
RBFOX1-206ENST00000535565 FA2HQ7L5A8 372 aa16.26■□□□□ 0.19
RBFOX1-206ENST00000535565 B9D2Q9BPU9 175 aa16.26■□□□□ 0.19
RBFOX1-206ENST00000535565 TRBV6-5A0A0K0K1A5 114 aa16.25■□□□□ 0.19
RBFOX1-206ENST00000535565 HOXA5P20719 270 aa16.25■□□□□ 0.19
RBFOX1-206ENST00000535565 CHCHD1Q96BP2 118 aaKnown RBP16.25■□□□□ 0.19
RBFOX1-206ENST00000535565 K7EQD1 137 aa16.24■□□□□ 0.19
RBFOX1-206ENST00000535565 SMIM2Q9BVW6 85 aa16.24■□□□□ 0.19
RBFOX1-206ENST00000535565 A0A0J9YWU9 116 aa16.23■□□□□ 0.19
RBFOX1-206ENST00000535565 LINC00310P59036 64 aa16.23■□□□□ 0.19
RBFOX1-206ENST00000535565 FHL2Q14192 279 aa16.23■□□□□ 0.19
RBFOX1-206ENST00000535565 Q8N8P6 123 aa16.23■□□□□ 0.19
RBFOX1-206ENST00000535565 DNAJC30Q96LL9 226 aa16.23■□□□□ 0.19
RBFOX1-206ENST00000535565 TNFRSF18Q9Y5U5 241 aa16.23■□□□□ 0.19
RBFOX1-206ENST00000535565 TRBV6-4A0A1B0GX49 114 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 HSBP1O75506 76 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 P0DMU3 169 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 FAM231AP0DMU4 169 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 FAM231CP0DMU5 169 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 ESDP10768 282 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 SLC25A29Q8N8R3 303 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 URB1-AS1Q96HZ7 61 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 AP5S1Q9NUS5 200 aa16.22■□□□□ 0.19
RBFOX1-206ENST00000535565 TRBV10-1A0A0K0K1A3 114 aa16.21■□□□□ 0.19
RBFOX1-206ENST00000535565 ATP5G1P05496 136 aa16.21■□□□□ 0.19
RBFOX1-206ENST00000535565 S100A2P29034 98 aa16.21■□□□□ 0.19
RBFOX1-206ENST00000535565 RPL32P62910 135 aaKnown RBP16.21■□□□□ 0.19
RBFOX1-206ENST00000535565 PDZD11Q5EBL8 140 aa16.21■□□□□ 0.19
RBFOX1-206ENST00000535565 SDHAF1A6NFY7 115 aa16.21■□□□□ 0.18
RBFOX1-206ENST00000535565 NUPR1O60356 82 aa16.21■□□□□ 0.18
RBFOX1-206ENST00000535565 DEFA6Q01524 100 aa16.21■□□□□ 0.18
RBFOX1-206ENST00000535565 HIST3H2BBQ8N257 126 aa16.21■□□□□ 0.18
RBFOX1-206ENST00000535565 NEXN-AS1Q8NBZ9 246 aa16.21■□□□□ 0.18
RBFOX1-206ENST00000535565 TMEM70Q9BUB7 260 aa16.21■□□□□ 0.18
RBFOX1-206ENST00000535565 RHOHQ15669 191 aa16.2■□□□□ 0.18
RBFOX1-206ENST00000535565 IGLV2-18A0A075B6J9 118 aa16.19■□□□□ 0.18
RBFOX1-206ENST00000535565 VCYO14598 125 aa16.19■□□□□ 0.18
RBFOX1-206ENST00000535565 POLR2KP53803 58 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-206ENST00000535565 PRADC1Q9BSG0 188 aa16.19■□□□□ 0.18
RBFOX1-206ENST00000535565 HHLA3Q9XRX5 114 aa16.19■□□□□ 0.18
RBFOX1-206ENST00000535565 RPL36AP83881 106 aaKnown RBP16.18■□□□□ 0.18
RBFOX1-206ENST00000535565 RPL36ALQ969Q0 106 aaKnown RBP16.18■□□□□ 0.18
RBFOX1-206ENST00000535565 C12orf74Q32Q52 190 aa16.17■□□□□ 0.18
RBFOX1-206ENST00000535565 PRO0255Q9UI72 69 aa16.17■□□□□ 0.18
RBFOX1-206ENST00000535565 TRBV7-3A0A075B6L6 115 aa16.17■□□□□ 0.18
RBFOX1-206ENST00000535565 TRBV27A0A0K0K1C4 114 aa16.17■□□□□ 0.18
RBFOX1-206ENST00000535565 LINC01546A6NGU7 62 aa16.17■□□□□ 0.18
RBFOX1-206ENST00000535565 K7EMI3 77 aa16.17■□□□□ 0.18
RBFOX1-206ENST00000535565 KIR2DL4Q99706 377 aa16.17■□□□□ 0.18
RBFOX1-206ENST00000535565 TENM3Q9P273 2699 aa16.16■□□□□ 0.18
RBFOX1-206ENST00000535565 AMTP48728 403 aa16.16■□□□□ 0.18
RBFOX1-206ENST00000535565 C11orf45Q8TAV5 145 aa16.16■□□□□ 0.18
RBFOX1-206ENST00000535565 TMEM18Q96B42 140 aa16.16■□□□□ 0.18
RBFOX1-206ENST00000535565 Q9UF83 564 aa16.16■□□□□ 0.18
RBFOX1-206ENST00000535565 I3L3M4 83 aa16.15■□□□□ 0.18
RBFOX1-206ENST00000535565 CRYBA4P53673 196 aa16.15■□□□□ 0.18
RBFOX1-206ENST00000535565 ZNRF2Q8NHG8 242 aa16.15■□□□□ 0.18
RBFOX1-206ENST00000535565 F5H768 121 aa16.14■□□□□ 0.17
RBFOX1-206ENST00000535565 TCAPO15273 167 aa16.14■□□□□ 0.17
RBFOX1-206ENST00000535565 NHLRC4P0CG21 123 aaPredicted RBP16.14■□□□□ 0.17
RBFOX1-206ENST00000535565 HTN3P15516 51 aa16.14■□□□□ 0.17
RBFOX1-206ENST00000535565 LAGE3Q14657 143 aa16.14■□□□□ 0.17
RBFOX1-206ENST00000535565 NEGR1Q7Z3B1 354 aa16.14■□□□□ 0.17
RBFOX1-206ENST00000535565 FAM19A2Q8N3H0 131 aa16.14■□□□□ 0.17
RBFOX1-206ENST00000535565 IGHV1-24A0A0C4DH33 117 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 ORMDL2Q53FV1 153 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 GAGE12JA6NER3 117 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 FABP4P15090 132 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 GAGE1Q13065 139 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 GAGE4Q13068 117 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 GAGE5Q13069 117 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 PMCHL1Q16048 86 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 GAGE13Q4V321 117 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 HIST1H2BLQ99880 126 aa16.13■□□□□ 0.17
RBFOX1-206ENST00000535565 PAX4O43316 350 aa16.12■□□□□ 0.17
RBFOX1-206ENST00000535565 FCER1GP30273 86 aa16.12■□□□□ 0.17
RBFOX1-206ENST00000535565 PACRGQ96M98 296 aaPredicted RBP16.12■□□□□ 0.17
RBFOX1-206ENST00000535565 Q6ZTC4 211 aa16.11■□□□□ 0.17
RBFOX1-206ENST00000535565 LOC100131303A0A0U1RQF7 123 aa16.1■□□□□ 0.17
RBFOX1-206ENST00000535565 IFITM10A6NMD0 228 aa16.1■□□□□ 0.17
RBFOX1-206ENST00000535565 NANOS2P60321 138 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-206ENST00000535565 UBE2D3P61077 147 aa16.1■□□□□ 0.17
RBFOX1-206ENST00000535565 UBE2D2P62837 147 aa16.1■□□□□ 0.17
RBFOX1-206ENST00000535565 DAZ4Q86SG3 579 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-206ENST00000535565 DAZ3Q9NR90 486 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-206ENST00000535565 LOC105371267A0A1B0GV96 52 aa16.09■□□□□ 0.17
RBFOX1-206ENST00000535565 NUDT3O95989 172 aa16.09■□□□□ 0.17
RBFOX1-206ENST00000535565 HBDP02042 147 aa16.09■□□□□ 0.17
RBFOX1-206ENST00000535565 GYPEP15421 78 aa16.09■□□□□ 0.17
RBFOX1-206ENST00000535565 PHLDA1Q8WV24 401 aaPredicted RBP16.09■□□□□ 0.17
RBFOX1-206ENST00000535565 TSHBP01222 138 aa16.08■□□□□ 0.16
RBFOX1-206ENST00000535565 G0S2P27469 103 aa16.08■□□□□ 0.16
RBFOX1-206ENST00000535565 TRAV26-1A0A087WT03 109 aa16.07■□□□□ 0.16
RBFOX1-206ENST00000535565 IGHV3-38A0A0C4DH36 116 aa16.07■□□□□ 0.16
RBFOX1-206ENST00000535565 A0A0J9YY99 117 aa16.07■□□□□ 0.16
RBFOX1-206ENST00000535565 BTF3P20290 206 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms