RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 KNCNA6PVL3 124 aa9.05□□□□□ -0.96
SCARB1-204ENST00000535005 PRSS47A8MTI9 375 aa9.05□□□□□ -0.96
SCARB1-204ENST00000535005 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
SCARB1-204ENST00000535005 AZU1P20160 251 aa9.05□□□□□ -0.96
SCARB1-204ENST00000535005 FXYD2P54710 66 aa9.05□□□□□ -0.96
SCARB1-204ENST00000535005 LINC00477Q96M19 166 aa9.05□□□□□ -0.96
SCARB1-204ENST00000535005 DKK2Q9UBU2 259 aa9.05□□□□□ -0.96
SCARB1-204ENST00000535005 TRBV25-1A0A075B6N4 114 aa9.04□□□□□ -0.96
SCARB1-204ENST00000535005 AGPAT4-IT1Q9H0P7 198 aa9.04□□□□□ -0.96
SCARB1-204ENST00000535005 WFDC10AQ9H1F0 79 aa9.04□□□□□ -0.96
SCARB1-204ENST00000535005 A0A1B0GWB2 263 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 A8MZ25 164 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 IGLL5B9A064 214 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 TRPT1Q86TN4 253 aaKnown RBP9.03□□□□□ -0.96
SCARB1-204ENST00000535005 Q8N8P6 123 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 ATP6V0E2Q8NHE4 81 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 ODF3Q96PU9 254 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 NAA38Q9BRA0 125 aaKnown RBP9.03□□□□□ -0.96
SCARB1-204ENST00000535005 TRBV7-9A0A0J9YWB2 115 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 PRB4P10163 310 aaPredicted RBP9.03□□□□□ -0.96
SCARB1-204ENST00000535005 PLNP26678 52 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 LEPP41159 167 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 TMEM78Q5T7P6 136 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 STHQ8IWL8 128 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 ZNF479Q96JC4 524 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 LENEPQ9Y5L5 61 aa9.03□□□□□ -0.96
SCARB1-204ENST00000535005 ERCC8Q13216 396 aa9.02□□□□□ -0.97
SCARB1-204ENST00000535005 AMTNQ6UX39 209 aa9.02□□□□□ -0.97
SCARB1-204ENST00000535005 RNF185Q96GF1 192 aa9.02□□□□□ -0.97
SCARB1-204ENST00000535005 FAM19A4Q96LR4 140 aa9.02□□□□□ -0.97
SCARB1-204ENST00000535005 PRSS1P07477 247 aa9.01□□□□□ -0.97
SCARB1-204ENST00000535005 NHP2Q9NX24 153 aaKnown RBP9.01□□□□□ -0.97
SCARB1-204ENST00000535005 RBMY1BA6NDE4 496 aaKnown RBP9.01□□□□□ -0.97
SCARB1-204ENST00000535005 RBMY1EA6NEQ0 496 aaKnown RBP9.01□□□□□ -0.97
SCARB1-204ENST00000535005 TNFRSF6BO95407 300 aa9.01□□□□□ -0.97
SCARB1-204ENST00000535005 RBMY1DP0C7P1 496 aaKnown RBP9.01□□□□□ -0.97
SCARB1-204ENST00000535005 IGHV4-30-4P0DP06 118 aa9.01□□□□□ -0.97
SCARB1-204ENST00000535005 RRN3P1Q2M238 152 aa9.01□□□□□ -0.97
SCARB1-204ENST00000535005 VCX2Q9H322 139 aa9.01□□□□□ -0.97
SCARB1-204ENST00000535005 AGRNO00468 2067 aa9□□□□□ -0.97
SCARB1-204ENST00000535005 IGKV2D-26A0A0A0MRZ7 120 aa9□□□□□ -0.97
SCARB1-204ENST00000535005 TRAV12-1A0A0B4J245 112 aa9□□□□□ -0.97
SCARB1-204ENST00000535005 FABP5P3A8MUU1 101 aa9□□□□□ -0.97
SCARB1-204ENST00000535005 C12orf74Q32Q52 190 aa9□□□□□ -0.97
SCARB1-204ENST00000535005 GAGE13Q4V321 117 aa9□□□□□ -0.97
SCARB1-204ENST00000535005 MORN3Q6PF18 240 aaPredicted RBP9□□□□□ -0.97
SCARB1-204ENST00000535005 GTSF1LQ9H1H1 148 aa9□□□□□ -0.97
SCARB1-204ENST00000535005 K7EMI3 77 aa8.99□□□□□ -0.97
SCARB1-204ENST00000535005 IGKV3-20P01619 116 aa8.99□□□□□ -0.97
SCARB1-204ENST00000535005 ZC2HC1BQ5TFG8 222 aa8.99□□□□□ -0.97
SCARB1-204ENST00000535005 Q8TAT8 98 aa8.99□□□□□ -0.97
SCARB1-204ENST00000535005 ASCL2Q99929 193 aa8.99□□□□□ -0.97
SCARB1-204ENST00000535005 A0A087WX48 190 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 TMSB15BA0A087X1C1 80 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 K7EIL1 84 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 LYRM7Q5U5X0 104 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 KIR2DL5BQ8NHK3 375 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 MRAP2Q96G30 205 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 IGLV2-18A0A075B6J9 118 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 TMEM238LA0A1B0GVL6 79 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 SMKR1H3BMG3 65 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 RPL35AP18077 110 aaKnown RBP8.98□□□□□ -0.97
SCARB1-204ENST00000535005 SMAGPQ0VAQ4 97 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 LAGE3Q14657 143 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 ZFAND2AQ8N6M9 145 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 C18orf15Q96N68 181 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 PRO0461Q9UI25 63 aa8.98□□□□□ -0.97
SCARB1-204ENST00000535005 A6NJY4 79 aa8.97□□□□□ -0.97
SCARB1-204ENST00000535005 KLLNB2CW77 178 aa8.97□□□□□ -0.97
SCARB1-204ENST00000535005 K7ERJ3 54 aa8.97□□□□□ -0.97
SCARB1-204ENST00000535005 PRB2P02812 416 aaPredicted RBP8.97□□□□□ -0.97
SCARB1-204ENST00000535005 WFDC2Q14508 124 aa8.97□□□□□ -0.97
SCARB1-204ENST00000535005 TRBV7-3A0A075B6L6 115 aa8.96□□□□□ -0.97
SCARB1-204ENST00000535005 IGHV4-4A0A075B6R2 117 aa8.96□□□□□ -0.97
SCARB1-204ENST00000535005 GIG44P09565 113 aaPredicted RBP8.96□□□□□ -0.97
SCARB1-204ENST00000535005 H3BMG7 143 aa8.96□□□□□ -0.98
SCARB1-204ENST00000535005 APOC4P55056 127 aa8.96□□□□□ -0.98
SCARB1-204ENST00000535005 SPINK13Q1W4C9 94 aa8.96□□□□□ -0.98
SCARB1-204ENST00000535005 HIST1H4GQ99525 98 aa8.96□□□□□ -0.98
SCARB1-204ENST00000535005 C1QTNF4Q9BXJ3 329 aa8.96□□□□□ -0.98
SCARB1-204ENST00000535005 MRPL16Q9NX20 251 aaKnown RBP8.96□□□□□ -0.98
SCARB1-204ENST00000535005 H7C1H1 209 aa8.95□□□□□ -0.98
SCARB1-204ENST00000535005 ORM1P02763 201 aa8.95□□□□□ -0.98
SCARB1-204ENST00000535005 FXYD7P58549 80 aa8.95□□□□□ -0.98
SCARB1-204ENST00000535005 LINC01549A6NIU2 74 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 F8VRH5 84 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.94□□□□□ -0.98
SCARB1-204ENST00000535005 TCTAP57738 103 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 CKS1BP61024 79 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 PRR9Q5T870 116 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 OR11H2Q8NH07 326 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 MRPL35Q9NZE8 188 aaKnown RBP8.94□□□□□ -0.98
SCARB1-204ENST00000535005 CYSLTR1Q9Y271 337 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 MEGF8Q7Z7M0 2845 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 MYMXA0A1B0GTQ4 84 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 ZNF80P51504 273 aaPredicted RBP8.94□□□□□ -0.98
SCARB1-204ENST00000535005 ETDBQ3ZM63 59 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 ORMDL2Q53FV1 153 aa8.94□□□□□ -0.98
SCARB1-204ENST00000535005 ZNF575Q86XF7 245 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms