RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RIPPLY3P57055 190 aa9.73□□□□□ -0.85
BEST1-208ENST00000534553 RNASE8Q8TDE3 154 aaKnown RBP9.73□□□□□ -0.85
BEST1-208ENST00000534553 C2orf88Q9BSF0 95 aa9.73□□□□□ -0.85
BEST1-208ENST00000534553 WNK1Q9H4A3 2382 aa9.73□□□□□ -0.85
BEST1-208ENST00000534553 DPM2O94777 84 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 IGKCP01834 107 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 PLNP26678 52 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 CFAP126Q5VTH2 177 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 C16orf74Q96GX8 76 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 DNAJC30Q96LL9 226 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 HIVEP1P15822 2718 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 FN1P02751 2386 aaKnown RBP9.72□□□□□ -0.85
BEST1-208ENST00000534553 A0A087WX48 190 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 I3L3M4 83 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 RS1O15537 224 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 CIDEAO60543 219 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.72□□□□□ -0.85
BEST1-208ENST00000534553 TMEM141Q96I45 108 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 TIMM17AQ99595 171 aa9.72□□□□□ -0.85
BEST1-208ENST00000534553 BAHCC1Q9P281 2608 aa9.71□□□□□ -0.85
BEST1-208ENST00000534553 COX8AP10176 69 aa9.71□□□□□ -0.85
BEST1-208ENST00000534553 DAZ2Q13117 558 aaKnown RBP9.71□□□□□ -0.85
BEST1-208ENST00000534553 DKK2Q9UBU2 259 aa9.71□□□□□ -0.85
BEST1-208ENST00000534553 C2CD3Q4AC94 2353 aa9.71□□□□□ -0.86
BEST1-208ENST00000534553 IGHV3OR16-12A0A075B7B8 117 aa9.7□□□□□ -0.86
BEST1-208ENST00000534553 F8VRH5 84 aa9.7□□□□□ -0.86
BEST1-208ENST00000534553 IGHV3-53P01767 116 aa9.7□□□□□ -0.86
BEST1-208ENST00000534553 SNHG12Q9BXW3 62 aa9.7□□□□□ -0.86
BEST1-208ENST00000534553 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
BEST1-208ENST00000534553 GIG44P09565 113 aaPredicted RBP9.7□□□□□ -0.86
BEST1-208ENST00000534553 AZU1P20160 251 aa9.69□□□□□ -0.86
BEST1-208ENST00000534553 NEXN-AS1Q8NBZ9 246 aa9.69□□□□□ -0.86
BEST1-208ENST00000534553 CSNK1G2-AS1Q8NCQ2 148 aa9.69□□□□□ -0.86
BEST1-208ENST00000534553 MRPL16Q9NX20 251 aaKnown RBP9.69□□□□□ -0.86
BEST1-208ENST00000534553 TP53TG1Q9Y2A0 90 aa9.69□□□□□ -0.86
BEST1-208ENST00000534553 DLEU1O43261 78 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 RPL35AP18077 110 aaKnown RBP9.68□□□□□ -0.86
BEST1-208ENST00000534553 RRN3P1Q2M238 152 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 PAPPA-AS1Q5QFB9 102 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 TRAV4A0A0B4J268 109 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 EREGO14944 169 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 NPSP0C0P6 89 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 NEGR1Q7Z3B1 354 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 OR4C5Q8NGB2 326 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 BAALCQ8WXS3 180 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 WFDC10AQ9H1F0 79 aa9.68□□□□□ -0.86
BEST1-208ENST00000534553 MRPL35Q9NZE8 188 aaKnown RBP9.68□□□□□ -0.86
BEST1-208ENST00000534553 CHTOPQ9Y3Y2 248 aaKnown RBP9.68□□□□□ -0.86
BEST1-208ENST00000534553 TRGV1A0A0A0MS02 117 aa9.67□□□□□ -0.86
BEST1-208ENST00000534553 IGIPA6NJ69 53 aa9.67□□□□□ -0.86
BEST1-208ENST00000534553 PRM2P04554 102 aa9.67□□□□□ -0.86
BEST1-208ENST00000534553 WFDC9Q8NEX5 89 aa9.67□□□□□ -0.86
BEST1-208ENST00000534553 HHLA3Q9XRX5 114 aa9.67□□□□□ -0.86
BEST1-208ENST00000534553 TRBV10-1A0A0K0K1A3 114 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 SIVA1O15304 175 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 TSHBP01222 138 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 ANKRD39Q53RE8 183 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 C20orf203Q8NBC4 194 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 IGHV3-73A0A0B4J1V6 119 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 WIPF1O43516 503 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 PMVKQ15126 192 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 BOD1L2Q8IYS8 172 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 STPG4Q8N801 248 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 OVOL2Q9BRP0 275 aa9.66□□□□□ -0.86
BEST1-208ENST00000534553 CRYBA4P53673 196 aa9.65□□□□□ -0.86
BEST1-208ENST00000534553 ZC2HC1BQ5TFG8 222 aa9.65□□□□□ -0.86
BEST1-208ENST00000534553 C12orf54Q6X4T0 127 aa9.65□□□□□ -0.86
BEST1-208ENST00000534553 SMIM9A6NGZ8 99 aa9.64□□□□□ -0.87
BEST1-208ENST00000534553 COL5A1-AS1Q5SY13 56 aa9.64□□□□□ -0.87
BEST1-208ENST00000534553 KIR2DL5BQ8NHK3 375 aa9.64□□□□□ -0.87
BEST1-208ENST00000534553 PYGO1Q9Y3Y4 419 aa9.64□□□□□ -0.87
BEST1-208ENST00000534553 PRSS29PA6NIE9 313 aa9.63□□□□□ -0.87
BEST1-208ENST00000534553 NOP10Q9NPE3 64 aaKnown RBP9.63□□□□□ -0.87
BEST1-208ENST00000534553 PLAC8L1A1L4L8 177 aa9.63□□□□□ -0.87
BEST1-208ENST00000534553 FGF6P10767 208 aa9.63□□□□□ -0.87
BEST1-208ENST00000534553 NMUP48645 174 aa9.63□□□□□ -0.87
BEST1-208ENST00000534553 Q6ZTI0 123 aa9.63□□□□□ -0.87
BEST1-208ENST00000534553 K7EQD1 137 aa9.62□□□□□ -0.87
BEST1-208ENST00000534553 P0DMU3 169 aa9.62□□□□□ -0.87
BEST1-208ENST00000534553 FAM231AP0DMU4 169 aa9.62□□□□□ -0.87
BEST1-208ENST00000534553 FAM231CP0DMU5 169 aa9.62□□□□□ -0.87
BEST1-208ENST00000534553 APOC4P55056 127 aa9.62□□□□□ -0.87
BEST1-208ENST00000534553 RPL39P62891 51 aaKnown RBP9.62□□□□□ -0.87
BEST1-208ENST00000534553 RPL36AP83881 106 aaKnown RBP9.62□□□□□ -0.87
BEST1-208ENST00000534553 COTL1Q14019 142 aa9.62□□□□□ -0.87
BEST1-208ENST00000534553 TMEM97Q5BJF2 176 aa9.62□□□□□ -0.87
BEST1-208ENST00000534553 RPL36ALQ969Q0 106 aaKnown RBP9.62□□□□□ -0.87
BEST1-208ENST00000534553 Q6ZSN1 163 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 CST9LQ9H4G1 147 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 F8P00451 2351 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 TRBV7-3A0A075B6L6 115 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 TRGV2A0A075B6R0 118 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 BATFQ16520 125 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 DAZ4Q86SG3 579 aaKnown RBP9.61□□□□□ -0.87
BEST1-208ENST00000534553 LURAP1LQ8IV03 231 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 ZNF479Q96JC4 524 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 DAZ3Q9NR90 486 aaKnown RBP9.61□□□□□ -0.87
BEST1-208ENST00000534553 SPANXA1Q9NS26 97 aa9.61□□□□□ -0.87
BEST1-208ENST00000534553 TRBV6-4A0A1B0GX49 114 aa9.6□□□□□ -0.87
BEST1-208ENST00000534553 HERVK_113P61574 105 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms