RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 TRBV27A0A0K0K1C4 114 aa15.78■□□□□ 0.12
AP004608.1-202ENST00000533390 TOMM6Q96B49 74 aa15.78■□□□□ 0.12
AP004608.1-202ENST00000533390 JMJD1CQ15652 2540 aa15.77■□□□□ 0.12
AP004608.1-202ENST00000533390 RRN3P1Q2M238 152 aa15.77■□□□□ 0.11
AP004608.1-202ENST00000533390 MIEN1Q9BRT3 115 aa15.77■□□□□ 0.11
AP004608.1-202ENST00000533390 IGLL1P15814 213 aa15.76■□□□□ 0.11
AP004608.1-202ENST00000533390 C2orf66Q6UXQ4 117 aa15.76■□□□□ 0.11
AP004608.1-202ENST00000533390 TEP1Q99973 2627 aaKnown RBP15.76■□□□□ 0.11
AP004608.1-202ENST00000533390 LINC01549A6NIU2 74 aa15.75■□□□□ 0.11
AP004608.1-202ENST00000533390 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.75■□□□□ 0.11
AP004608.1-202ENST00000533390 ZFP2Q6ZN57 461 aa15.75■□□□□ 0.11
AP004608.1-202ENST00000533390 SCGB3A1Q96QR1 104 aa15.75■□□□□ 0.11
AP004608.1-202ENST00000533390 hDV102S1A0JD36 115 aa15.74■□□□□ 0.11
AP004608.1-202ENST00000533390 DAZ2Q13117 558 aaKnown RBP15.74■□□□□ 0.11
AP004608.1-202ENST00000533390 OR4C5Q8NGB2 326 aa15.74■□□□□ 0.11
AP004608.1-202ENST00000533390 NIPBLQ6KC79 2804 aaeCLIP15.74■□□□□ 0.11
AP004608.1-202ENST00000533390 IGLC3P0DOY3 106 aa15.74■□□□□ 0.11
AP004608.1-202ENST00000533390 Q6ZN92 141 aa15.74■□□□□ 0.11
AP004608.1-202ENST00000533390 CYSLTR1Q9Y271 337 aa15.74■□□□□ 0.11
AP004608.1-202ENST00000533390 NOP10Q9NPE3 64 aaKnown RBP15.73■□□□□ 0.11
AP004608.1-202ENST00000533390 UQCR10Q9UDW1 63 aa15.73■□□□□ 0.11
AP004608.1-202ENST00000533390 TNFRSF18Q9Y5U5 241 aa15.73■□□□□ 0.11
AP004608.1-202ENST00000533390 ATRQ13535 2644 aa15.73■□□□□ 0.11
AP004608.1-202ENST00000533390 I3L3M4 83 aa15.72■□□□□ 0.11
AP004608.1-202ENST00000533390 IGHV3-53P01767 116 aa15.72■□□□□ 0.11
AP004608.1-202ENST00000533390 C3orf56Q8N813 242 aa15.72■□□□□ 0.11
AP004608.1-202ENST00000533390 Q6ZTI0 123 aa15.71■□□□□ 0.11
AP004608.1-202ENST00000533390 WIPF1O43516 503 aa15.71■□□□□ 0.11
AP004608.1-202ENST00000533390 P0DMU3 169 aa15.71■□□□□ 0.11
AP004608.1-202ENST00000533390 FAM231AP0DMU4 169 aa15.71■□□□□ 0.11
AP004608.1-202ENST00000533390 FAM231CP0DMU5 169 aa15.71■□□□□ 0.11
AP004608.1-202ENST00000533390 ODF1Q14990 250 aa15.71■□□□□ 0.11
AP004608.1-202ENST00000533390 DEFB104AQ8WTQ1 72 aa15.71■□□□□ 0.11
AP004608.1-202ENST00000533390 TENM1Q9UKZ4 2725 aa15.7■□□□□ 0.1
AP004608.1-202ENST00000533390 RHOHQ15669 191 aa15.7■□□□□ 0.1
AP004608.1-202ENST00000533390 ERASQ7Z444 233 aa15.7■□□□□ 0.1
AP004608.1-202ENST00000533390 C14orf144Q96I85 54 aa15.7■□□□□ 0.1
AP004608.1-202ENST00000533390 DKK2Q9UBU2 259 aa15.7■□□□□ 0.1
AP004608.1-202ENST00000533390 TRAV4A0A0B4J268 109 aa15.69■□□□□ 0.1
AP004608.1-202ENST00000533390 PLAC8L1A1L4L8 177 aa15.69■□□□□ 0.1
AP004608.1-202ENST00000533390 RIPPLY3P57055 190 aa15.69■□□□□ 0.1
AP004608.1-202ENST00000533390 Q6ZSN1 163 aa15.69■□□□□ 0.1
AP004608.1-202ENST00000533390 DNAJC30Q96LL9 226 aa15.69■□□□□ 0.1
AP004608.1-202ENST00000533390 TP53TG1Q9Y2A0 90 aa15.69■□□□□ 0.1
AP004608.1-202ENST00000533390 NOTCH3Q9UM47 2321 aa15.68■□□□□ 0.1
AP004608.1-202ENST00000533390 SHISA2Q6UWI4 295 aa15.68■□□□□ 0.1
AP004608.1-202ENST00000533390 C12orf54Q6X4T0 127 aa15.68■□□□□ 0.1
AP004608.1-202ENST00000533390 OVOL2Q9BRP0 275 aa15.68■□□□□ 0.1
AP004608.1-202ENST00000533390 NEXN-AS1Q8NBZ9 246 aa15.67■□□□□ 0.1
AP004608.1-202ENST00000533390 A0A087WX48 190 aa15.67■□□□□ 0.1
AP004608.1-202ENST00000533390 TRAV12-1A0A0B4J245 112 aa15.67■□□□□ 0.1
AP004608.1-202ENST00000533390 TSHBP01222 138 aa15.67■□□□□ 0.1
AP004608.1-202ENST00000533390 APOC4P55056 127 aa15.67■□□□□ 0.1
AP004608.1-202ENST00000533390 ZNF479Q96JC4 524 aa15.67■□□□□ 0.1
AP004608.1-202ENST00000533390 PRIMA1Q86XR5 153 aa15.66■□□□□ 0.1
AP004608.1-202ENST00000533390 KIR2DL5BQ8NHK3 375 aa15.66■□□□□ 0.1
AP004608.1-202ENST00000533390 DPM2O94777 84 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 IGKCP01834 107 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 ZMAT4Q9H898 229 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 TRGV2A0A075B6R0 118 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 GAGE12BA1L429 117 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 GAGE7O76087 117 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 GAGE12FP0CL80 117 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 GAGE12GP0CL81 117 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 GAGE12IP0CL82 117 aa15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 RPL39P62891 51 aaKnown RBP15.65■□□□□ 0.1
AP004608.1-202ENST00000533390 HNRNPA3P51991 378 aaKnown RBP15.64■□□□□ 0.09
AP004608.1-202ENST00000533390 BAALCQ8WXS3 180 aa15.64■□□□□ 0.09
AP004608.1-202ENST00000533390 TMEM141Q96I45 108 aa15.64■□□□□ 0.09
AP004608.1-202ENST00000533390 SMIM9A6NGZ8 99 aa15.63■□□□□ 0.09
AP004608.1-202ENST00000533390 CIDEAO60543 219 aa15.63■□□□□ 0.09
AP004608.1-202ENST00000533390 TIMM17AQ99595 171 aa15.63■□□□□ 0.09
AP004608.1-202ENST00000533390 MRPL35Q9NZE8 188 aaKnown RBP15.63■□□□□ 0.09
AP004608.1-202ENST00000533390 VWFP04275 2813 aa15.63■□□□□ 0.09
AP004608.1-202ENST00000533390 IGIPA6NJ69 53 aa15.62■□□□□ 0.09
AP004608.1-202ENST00000533390 K7EQD1 137 aa15.62■□□□□ 0.09
AP004608.1-202ENST00000533390 C20orf203Q8NBC4 194 aa15.62■□□□□ 0.09
AP004608.1-202ENST00000533390 Q9UF83 564 aa15.62■□□□□ 0.09
AP004608.1-202ENST00000533390 CHTOPQ9Y3Y2 248 aaKnown RBP15.62■□□□□ 0.09
AP004608.1-202ENST00000533390 F8VRH5 84 aa15.61■□□□□ 0.09
AP004608.1-202ENST00000533390 EMP1P54849 157 aa15.61■□□□□ 0.09
AP004608.1-202ENST00000533390 SLC25A34Q6PIV7 304 aa15.61■□□□□ 0.09
AP004608.1-202ENST00000533390 STPG4Q8N801 248 aa15.61■□□□□ 0.09
AP004608.1-202ENST00000533390 PLNP26678 52 aa15.61■□□□□ 0.09
AP004608.1-202ENST00000533390 ANKRD39Q53RE8 183 aa15.61■□□□□ 0.09
AP004608.1-202ENST00000533390 X6R8D5 127 aa15.61■□□□□ 0.09
AP004608.1-202ENST00000533390 TRBV10-1A0A0K0K1A3 114 aa15.6■□□□□ 0.09
AP004608.1-202ENST00000533390 RPL36AP83881 106 aaKnown RBP15.59■□□□□ 0.09
AP004608.1-202ENST00000533390 ZNRF2Q8NHG8 242 aa15.59■□□□□ 0.09
AP004608.1-202ENST00000533390 RPL36ALQ969Q0 106 aaKnown RBP15.59■□□□□ 0.09
AP004608.1-202ENST00000533390 CTAG1AP78358 180 aa15.59■□□□□ 0.09
AP004608.1-202ENST00000533390 DEFB135Q30KP9 77 aa15.59■□□□□ 0.09
AP004608.1-202ENST00000533390 TRBV7-3A0A075B6L6 115 aa15.58■□□□□ 0.08
AP004608.1-202ENST00000533390 M0R143 59 aa15.58■□□□□ 0.08
AP004608.1-202ENST00000533390 COTL1Q14019 142 aa15.58■□□□□ 0.08
AP004608.1-202ENST00000533390 OXLD1Q5BKU9 147 aa15.58■□□□□ 0.08
AP004608.1-202ENST00000533390 MRPL52Q86TS9 123 aaKnown RBP15.58■□□□□ 0.08
AP004608.1-202ENST00000533390 PHLDA1Q8WV24 401 aaPredicted RBP15.58■□□□□ 0.08
AP004608.1-202ENST00000533390 HHLA3Q9XRX5 114 aa15.58■□□□□ 0.08
AP004608.1-202ENST00000533390 PRSS29PA6NIE9 313 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms