RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 A0A1B0GXF2 115 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 A0A1W2PRE2 83 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 IGIPA6NJ69 53 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 J3KRW8 73 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 ATG12O94817 140 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 GCGP01275 180 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 KRTAP12-2P59991 146 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 RAB2AP61019 212 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 NEDD8Q15843 81 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 SUMO4Q6EEV6 95 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 GOLT1AQ6ZVE7 132 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 SLC25A31Q9H0C2 315 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 OR51M1Q9H341 326 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 PRELID1Q9Y255 219 aa0.78□□□□□ -2.29
KNL1-211ENST00000533001 LOC107984156A0A0G2JMH3 177 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 PDCD5O14737 125 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 SCO1O75880 301 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 ARPC4P59998 168 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 RRAS2P62070 204 aaPredicted RBP0.77□□□□□ -2.29
KNL1-211ENST00000533001 SH2D6Q7Z4S9 175 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 ARL17AQ8IVW1 177 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 SSSCA1O60232 199 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 ETFRF1Q6IPR1 90 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 MZT2BQ6NZ67 158 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 AQP10Q96PS8 301 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 IGHV3-64A0A075B6Q5 118 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 A0A087WZ39 114 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 AKR1C2P52895 323 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 RANP62826 216 aaKnown RBP0.77□□□□□ -2.29
KNL1-211ENST00000533001 ASB13Q8WXK3 278 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 BORCS5Q969J3 196 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 FMC1Q96HJ9 113 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 OPRPNQ99935 248 aaPredicted RBP0.77□□□□□ -2.29
KNL1-211ENST00000533001 H3BVH4 76 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 APOMO95445 188 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 SPRR1BP22528 89 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 NUP62P37198 522 aaPredicted RBP0.77□□□□□ -2.29
KNL1-211ENST00000533001 ERVK-16P61578 105 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 HIGD2BQ4VC39 106 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 MBD3L1Q8WWY6 194 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 CNBD2Q96M20 576 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 A8MWV9 139 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 TMBIM6P55061 237 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 PCOTHQ58A44 107 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 CLPSL2Q6UWE3 100 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 FP248Q71RG6 208 aaPredicted RBP0.77□□□□□ -2.29
KNL1-211ENST00000533001 OR4C5Q8NGB2 326 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 COQ8AQ8NI60 647 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 TSKUQ8WUA8 353 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 CHCHD10Q8WYQ3 142 aaPredicted RBP0.77□□□□□ -2.29
KNL1-211ENST00000533001 IMMP2LQ96T52 175 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 DIABLOQ9NR28 239 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 OTORQ9NRC9 128 aa0.77□□□□□ -2.29
KNL1-211ENST00000533001 LINC01546A6NGU7 62 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 SH2D1AO60880 128 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 MPC2O95563 127 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 MRPS10P82664 201 aaKnown RBP0.76□□□□□ -2.29
KNL1-211ENST00000533001 TP73-AS1Q9UF72 201 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 AKAIN1P0CW23 69 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 GZMBP10144 247 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 ATP6V0CP27449 155 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 KRTAP10-12P60413 245 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 RAB4BP61018 213 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 HERV-K104P61576 105 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 IAH1Q2TAA2 248 aaPredicted RBP0.76□□□□□ -2.29
KNL1-211ENST00000533001 TRIM16LQ309B1 348 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 CD164L2Q6UWJ8 174 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 C2orf48Q96LS8 159 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 PSENENQ9NZ42 101 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 SSR3Q9UNL2 185 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 A0A0D9SG52 128 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 ZNF727A8MUV8 499 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 SNURFLB1AK76 121 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 CYB5BO43169 146 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 COX7A2P2O60397 106 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 ARL14EPLP0DKL9 152 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 GCHFRP30047 84 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 SUB1P53999 127 aaKnown RBP eCLIP0.76□□□□□ -2.29
KNL1-211ENST00000533001 ZC2HC1BQ5TFG8 222 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 C10orf113Q5VZT2 155 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 C15orf54Q8N8G6 183 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 STRAPQ9Y3F4 350 aaKnown RBP0.76□□□□□ -2.29
KNL1-211ENST00000533001 TRAV21A0A0B4J279 112 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 GRIFINA4D1Z8 144 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 MYL9P24844 172 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 KRTAP10-7P60409 375 aaPredicted RBP0.76□□□□□ -2.29
KNL1-211ENST00000533001 C2orf82Q6UX34 121 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 OR5A1Q8NGJ0 315 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 SPRR4Q96PI1 79 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 PRRT1Q99946 306 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 PSMG3Q9BT73 122 aaPredicted RBP0.76□□□□□ -2.29
KNL1-211ENST00000533001 TRGV4A0A0C4DH28 118 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 IGLV5-39A0A0G2JS06 123 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 PTTG1O95997 202 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 GPX1P07203 203 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 FGF6P10767 208 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 ID1P41134 155 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 LEPP41159 167 aa0.76□□□□□ -2.29
KNL1-211ENST00000533001 RPL32P62910 135 aaKnown RBP0.76□□□□□ -2.29
KNL1-211ENST00000533001 CLINT1Q14677 625 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms