RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 KIR3DS1Q14943 382 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 ORMDL2Q53FV1 153 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 PRR9Q5T870 116 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 ZNF575Q86XF7 245 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 POM121L12Q8N7R1 296 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 Q8N8P6 123 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 SYT8Q8NBV8 401 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 C11orf45Q8TAV5 145 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 CLUHP3Q96NS8 147 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 SPAG8Q99932 426 aaPredicted RBP3.92□□□□□ -1.78
VPS11-204ENST00000530809 KIAA1109Q2LD37 5005 aa3.92□□□□□ -1.78
VPS11-204ENST00000530809 PLECQ15149 4684 aaKnown RBP3.91□□□□□ -1.78
VPS11-204ENST00000530809 NPYP01303 97 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 FCER1GP30273 86 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 HNRNPA3P51991 378 aaKnown RBP3.91□□□□□ -1.78
VPS11-204ENST00000530809 CMC4P56277 68 aaPredicted RBP3.91□□□□□ -1.78
VPS11-204ENST00000530809 KMT2AQ03164 3969 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 ANXA2RQ3ZCQ2 193 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 IFI27L1Q96BM0 104 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 SMIM2Q9BVW6 85 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 C11orf21Q9P2W6 132 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 APLNQ9ULZ1 77 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 MRPS16Q9Y3D3 137 aaKnown RBP3.91□□□□□ -1.78
VPS11-204ENST00000530809 HECTD4Q9Y4D8 3996 aa3.91□□□□□ -1.78
VPS11-204ENST00000530809 A0A096LNJ9 63 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 IGLL5B9A064 214 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 CDK2AP2O75956 126 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 ZNF688P0C7X2 276 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 P0DMU3 169 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 FAM231AP0DMU4 169 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 FAM231CP0DMU5 169 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 RNASE3P12724 160 aaKnown RBP3.9□□□□□ -1.79
VPS11-204ENST00000530809 HLA-DRB4P13762 266 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 EDN2P20800 178 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 NANOS2P60321 138 aaKnown RBP3.9□□□□□ -1.79
VPS11-204ENST00000530809 SUMO2P61956 95 aaKnown RBP3.9□□□□□ -1.79
VPS11-204ENST00000530809 LAGE3Q14657 143 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 Q6ZN92 141 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 NRACQ8N912 160 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 PTH2Q96A98 100 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 C9orf85Q96MD7 179 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 LINC00467Q9BRT7 94 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 MAP6D1Q9H9H5 199 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 GOLT1BQ9Y3E0 138 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 HLA-DRB4X5D2U9 266 aa3.9□□□□□ -1.79
VPS11-204ENST00000530809 IGKV3-7A0A075B6H7 116 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 IGLV2-18A0A075B6J9 118 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 IGHV1OR15-1A0A075B7D0 117 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 TRBV6-5A0A0K0K1A5 114 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 H7C1H1 209 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 RTL8CO15255 209 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 DLEU1O43261 78 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 NCR2O95944 276 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 EVI2AP22794 236 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 PLNP26678 52 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 RNASE4P34096 147 aaKnown RBP3.89□□□□□ -1.79
VPS11-204ENST00000530809 SSTP61278 116 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 COL5A1-AS1Q5SY13 56 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 SLC25A34Q6PIV7 304 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 CSTL1Q9H114 145 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 MSRB1Q9NZV6 116 aa3.89□□□□□ -1.79
VPS11-204ENST00000530809 TRAV10A0A0B4J240 114 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 TRAV12-1A0A0B4J245 112 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 IGHV3-16A0A0C4DH30 117 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 LOC389332A0A1B0GUA5 103 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 F6UB75 175 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 RHODO00212 210 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 SIVA1O15304 175 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 COX8AP10176 69 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
VPS11-204ENST00000530809 NUTF2P61970 127 aaKnown RBP3.88□□□□□ -1.79
VPS11-204ENST00000530809 ZNF415Q09FC8 603 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 RHOHQ15669 191 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 ODF3L2Q3SX64 289 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 PAPPA-AS1Q5QFB9 102 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 AMTNQ6UX39 209 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 MAPKAPK5-AS1Q8N8E1 139 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 OR11H2Q8NH07 326 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 KIR2DL4Q99706 377 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 SNHG12Q9BXW3 62 aa3.88□□□□□ -1.79
VPS11-204ENST00000530809 RYR1P21817 5038 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 TRAV12-3A0A0B4J271 114 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 MUC21A0A0G2JKD1 596 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 MUC21A0A140T8X8 626 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 A8MWV9 139 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 SMKR1H3BMG3 65 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 H3BMM0 161 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.87□□□□□ -1.79
VPS11-204ENST00000530809 J3KRW8 73 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 DPM2O94777 84 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 NUDT3O95989 172 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 INSP01308 110 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 MGPP08493 103 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 NPSP0C0P6 89 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 TFPI2P48307 235 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 MUC21Q5SSG8 566 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 TRPT1Q86TN4 253 aaKnown RBP3.87□□□□□ -1.79
VPS11-204ENST00000530809 RASL10AQ92737 203 aa3.87□□□□□ -1.79
VPS11-204ENST00000530809 TOMM6Q96B49 74 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms