RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 LINC01546A6NGU7 62 aa10.29□□□□□ -0.76
TTC39A-216ENST00000530004 EMP1P54849 157 aa10.29□□□□□ -0.76
TTC39A-216ENST00000530004 C12orf57Q99622 126 aa10.29□□□□□ -0.76
TTC39A-216ENST00000530004 ST20Q9HBF5 79 aa10.29□□□□□ -0.76
TTC39A-216ENST00000530004 SMIM9A6NGZ8 99 aa10.28□□□□□ -0.76
TTC39A-216ENST00000530004 LEPROTL1O95214 131 aa10.28□□□□□ -0.76
TTC39A-216ENST00000530004 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
TTC39A-216ENST00000530004 KRTDAPP60985 99 aa10.28□□□□□ -0.76
TTC39A-216ENST00000530004 JOSD1Q15040 202 aaPredicted RBP10.28□□□□□ -0.76
TTC39A-216ENST00000530004 OR4C5Q8NGB2 326 aa10.28□□□□□ -0.76
TTC39A-216ENST00000530004 FBN3Q75N90 2809 aa10.28□□□□□ -0.76
TTC39A-216ENST00000530004 A0A096LNJ9 63 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 GAGE12BA1L429 117 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 H7C1H1 209 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 TCAPO15273 167 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 GAGE7O76087 117 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 GAGE12FP0CL80 117 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 GAGE12GP0CL81 117 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 GAGE12IP0CL82 117 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 ZFP2Q6ZN57 461 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 Q6ZSN1 163 aa10.27□□□□□ -0.77
TTC39A-216ENST00000530004 TRAV4A0A0B4J268 109 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 TRBV6-5A0A0K0K1A5 114 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 HBDP02042 147 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 MIFP14174 115 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 TMEM70Q9BUB7 260 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 EDA2RQ9HAV5 297 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 NIT2Q9NQR4 276 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 TRGV2A0A075B6R0 118 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 IGHV3-53P01767 116 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 C3orf79P0CE67 100 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 LAGE3Q14657 143 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 NEGR1Q7Z3B1 354 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 ZNF479Q96JC4 524 aa10.26□□□□□ -0.77
TTC39A-216ENST00000530004 SDHAF1A6NFY7 115 aa10.25□□□□□ -0.77
TTC39A-216ENST00000530004 P0DMU3 169 aa10.25□□□□□ -0.77
TTC39A-216ENST00000530004 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
TTC39A-216ENST00000530004 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
TTC39A-216ENST00000530004 POLR2KP53803 58 aaKnown RBP10.25□□□□□ -0.77
TTC39A-216ENST00000530004 RPL32P62910 135 aaKnown RBP10.25□□□□□ -0.77
TTC39A-216ENST00000530004 Q8NAQ8 132 aa10.25□□□□□ -0.77
TTC39A-216ENST00000530004 HSPB8Q9UJY1 196 aa10.25□□□□□ -0.77
TTC39A-216ENST00000530004 IGHV4-28A0A0C4DH34 117 aa10.24□□□□□ -0.77
TTC39A-216ENST00000530004 SCGB1D1O95968 90 aa10.24□□□□□ -0.77
TTC39A-216ENST00000530004 FCER1GP30273 86 aa10.24□□□□□ -0.77
TTC39A-216ENST00000530004 CDPF1Q6NVV7 123 aa10.24□□□□□ -0.77
TTC39A-216ENST00000530004 NACAE9PAV3 2078 aa10.24□□□□□ -0.77
TTC39A-216ENST00000530004 PRKDCP78527 4128 aaKnown RBP10.24□□□□□ -0.77
TTC39A-216ENST00000530004 VCYO14598 125 aa10.24□□□□□ -0.77
TTC39A-216ENST00000530004 K7EMI3 77 aa10.23□□□□□ -0.77
TTC39A-216ENST00000530004 NUDT3O95989 172 aa10.23□□□□□ -0.77
TTC39A-216ENST00000530004 BTF3P20290 206 aaKnown RBP10.23□□□□□ -0.77
TTC39A-216ENST00000530004 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
TTC39A-216ENST00000530004 NBEAL2Q6ZNJ1 2754 aa10.23□□□□□ -0.77
TTC39A-216ENST00000530004 TRBV27A0A0K0K1C4 114 aa10.22□□□□□ -0.77
TTC39A-216ENST00000530004 DEFB4AO15263 64 aa10.22□□□□□ -0.77
TTC39A-216ENST00000530004 Q9UF83 564 aa10.22□□□□□ -0.77
TTC39A-216ENST00000530004 DEFB130BP0DP73 79 aa10.21□□□□□ -0.77
TTC39A-216ENST00000530004 DEFB130AP0DP74 79 aa10.21□□□□□ -0.77
TTC39A-216ENST00000530004 NEXN-AS1Q8NBZ9 246 aa10.21□□□□□ -0.77
TTC39A-216ENST00000530004 DEFB104AQ8WTQ1 72 aa10.21□□□□□ -0.77
TTC39A-216ENST00000530004 KIR2DL4Q99706 377 aa10.21□□□□□ -0.77
TTC39A-216ENST00000530004 MAP1LC3CQ9BXW4 147 aa10.21□□□□□ -0.77
TTC39A-216ENST00000530004 TNFRSF18Q9Y5U5 241 aa10.21□□□□□ -0.77
TTC39A-216ENST00000530004 LINC00612Q8N6U2 182 aa10.21□□□□□ -0.78
TTC39A-216ENST00000530004 Q8N976 141 aa10.21□□□□□ -0.78
TTC39A-216ENST00000530004 C11orf68Q9H3H3 251 aaKnown RBP10.21□□□□□ -0.78
TTC39A-216ENST00000530004 A0A0J9YWU9 116 aa10.2□□□□□ -0.78
TTC39A-216ENST00000530004 SYS1-DBNDD2H3BUS1 97 aa10.2□□□□□ -0.78
TTC39A-216ENST00000530004 K7EQD1 137 aa10.2□□□□□ -0.78
TTC39A-216ENST00000530004 CIDEAO60543 219 aa10.2□□□□□ -0.78
TTC39A-216ENST00000530004 FAM222AQ5U5X8 452 aa10.2□□□□□ -0.78
TTC39A-216ENST00000530004 DNAJC30Q96LL9 226 aa10.2□□□□□ -0.78
TTC39A-216ENST00000530004 C18orf15Q96N68 181 aa10.2□□□□□ -0.78
TTC39A-216ENST00000530004 LYRM9A8MSI8 78 aa10.19□□□□□ -0.78
TTC39A-216ENST00000530004 I3L3M4 83 aa10.19□□□□□ -0.78
TTC39A-216ENST00000530004 TRGV4A0A0C4DH28 118 aa10.19□□□□□ -0.78
TTC39A-216ENST00000530004 H0Y8G0 127 aa10.19□□□□□ -0.78
TTC39A-216ENST00000530004 SPATA12Q7Z6I5 190 aa10.19□□□□□ -0.78
TTC39A-216ENST00000530004 SLC25A29Q8N8R3 303 aa10.19□□□□□ -0.78
TTC39A-216ENST00000530004 IFI27L1Q96BM0 104 aa10.19□□□□□ -0.78
TTC39A-216ENST00000530004 DKK2Q9UBU2 259 aa10.19□□□□□ -0.78
TTC39A-216ENST00000530004 DNAH9Q9NYC9 4486 aa10.18□□□□□ -0.78
TTC39A-216ENST00000530004 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
TTC39A-216ENST00000530004 TSHBP01222 138 aa10.18□□□□□ -0.78
TTC39A-216ENST00000530004 HUWE1Q7Z6Z7 4374 aaKnown RBP10.17□□□□□ -0.78
TTC39A-216ENST00000530004 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
TTC39A-216ENST00000530004 PET117Q6UWS5 81 aa10.17□□□□□ -0.78
TTC39A-216ENST00000530004 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
TTC39A-216ENST00000530004 TOMM6Q96B49 74 aa10.17□□□□□ -0.78
TTC39A-216ENST00000530004 FHL2Q14192 279 aa10.16□□□□□ -0.78
TTC39A-216ENST00000530004 ZNRF2Q8NHG8 242 aa10.16□□□□□ -0.78
TTC39A-216ENST00000530004 CELA1Q9UNI1 258 aa10.16□□□□□ -0.78
TTC39A-216ENST00000530004 TRBV7-3A0A075B6L6 115 aa10.16□□□□□ -0.78
TTC39A-216ENST00000530004 TRBV6-4A0A1B0GX49 114 aa10.16□□□□□ -0.78
TTC39A-216ENST00000530004 ATP5LO75964 103 aa10.16□□□□□ -0.78
TTC39A-216ENST00000530004 G0S2P27469 103 aa10.16□□□□□ -0.78
TTC39A-216ENST00000530004 RPL36AP83881 106 aaKnown RBP10.16□□□□□ -0.78
TTC39A-216ENST00000530004 RHOHQ15669 191 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms