RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 K7EN84 100 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 AGPAT2O15120 278 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 SSSCA1O60232 199 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
PTPRC-213ENST00000529828 SLC25A5P05141 298 aaKnown RBP2.33□□□□□ -2.04
PTPRC-213ENST00000529828 IGLC2P0DOY2 106 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 CXCL2P19875 107 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 ASIPP42127 132 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 RPL24P83731 157 aaKnown RBP2.33□□□□□ -2.04
PTPRC-213ENST00000529828 ANXA2RQ3ZCQ2 193 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 MUC21Q5SSG8 566 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 FAM162BQ5T6X4 162 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 BPIFA4PQ86YQ2 179 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 CBLN2Q8IUK8 224 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 OR10P1Q8NGE3 313 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 CIRBP-AS1Q8TBR5 109 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 BLNKQ8WV28 456 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 CIB3Q96Q77 187 aaPredicted RBP2.33□□□□□ -2.04
PTPRC-213ENST00000529828 MIEN1Q9BRT3 115 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 MRPL32Q9BYC8 188 aaKnown RBP2.33□□□□□ -2.04
PTPRC-213ENST00000529828 PPDPFQ9H3Y8 114 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 MAP1LC3AQ9H492 121 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 PRO0628Q9UI54 55 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 TNFSF18Q9UNG2 199 aa2.33□□□□□ -2.04
PTPRC-213ENST00000529828 IGHV1OR15-1A0A075B7D0 117 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 IBA57-AS1B1ANH7 110 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 KLLNB2CW77 178 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 INMT-MINDY4F8WBC2 141 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 MPDU1O75352 247 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 NDUFB6O95139 128 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 MPC2O95563 127 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 GPX1P07203 203 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 GZMBP10144 247 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 RAB5AP20339 215 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 AMTP48728 403 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 GNG4P50150 75 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 SMAGPQ0VAQ4 97 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 OR10J3Q5JRS4 329 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 GTF2H5Q6ZYL4 71 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 LRTM2Q8N967 370 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 Q8TAT8 98 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 TMEM37Q8WXS4 190 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 ODF3Q96PU9 254 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 SLC25A31Q9H0C2 315 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 AGPAT4-IT1Q9H0P7 198 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 PSENENQ9NZ42 101 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 PXMP4Q9Y6I8 212 aa2.32□□□□□ -2.04
PTPRC-213ENST00000529828 A0A0D9SG52 128 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 IFITM10A6NMD0 228 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 C9JCJ5 164 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 TAAR5O14804 337 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 MBPP02686 304 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-213ENST00000529828 MT1HL1P0DM35 61 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 ATP6V0CP27449 155 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 RPL29P47914 159 aaKnown RBP2.31□□□□□ -2.04
PTPRC-213ENST00000529828 S100A10P60903 97 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 RPL37AP61513 92 aaKnown RBP2.31□□□□□ -2.04
PTPRC-213ENST00000529828 RPS28P62857 69 aaKnown RBP2.31□□□□□ -2.04
PTPRC-213ENST00000529828 ARL16Q0P5N6 197 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 PPP1R1AQ13522 171 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 TAL2Q16559 108 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 LGALSLQ3ZCW2 172 aaPredicted RBP2.31□□□□□ -2.04
PTPRC-213ENST00000529828 LINC01556Q5JQF7 62 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 IBA57Q5T440 356 aaKnown RBP2.31□□□□□ -2.04
PTPRC-213ENST00000529828 C10orf113Q5VZT2 155 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 HIST3H2BBQ8N257 126 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 EXOC3-AS1Q8N2X6 119 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 OR5A1Q8NGJ0 315 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 PHYHIPLQ96FC7 376 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 FAM19A4Q96LR4 140 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 MGST2Q99735 147 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 TXNDC17Q9BRA2 123 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 CHAC1Q9BUX1 264 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 OR5AC2Q9NZP5 309 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 NAT8BQ9UHF3 227 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 LAMTOR2Q9Y2Q5 125 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 LSM5Q9Y4Y9 91 aaKnown RBP2.31□□□□□ -2.04
PTPRC-213ENST00000529828 IGHV3-73A0A0B4J1V6 119 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 A0A1B0GX51 115 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 RBFOX3A6NFN3 312 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 IGLV2-11P01706 119 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 PYYP10082 97 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 RPL12P30050 165 aaKnown RBP2.31□□□□□ -2.04
PTPRC-213ENST00000529828 ZNF345Q14585 488 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 TMEM183BQ1AE95 376 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 KHDC3LQ587J8 217 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 MIC13Q5XKP0 118 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 C9orf47Q6ZRZ4 202 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 TMEM183AQ8IXX5 376 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 ZFAND2AQ8N6M9 145 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 SGK494Q96LW2 274 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 NDFIP1Q9BT67 221 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 MED28Q9H204 178 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 CDIP1Q9H305 208 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 NPVFQ9HCQ7 196 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 UQCC1Q9NVA1 299 aa2.31□□□□□ -2.04
PTPRC-213ENST00000529828 TRAV8-6A0A0B4J262 113 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 GAGE12JA6NER3 117 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 B5MCH6 92 aa2.3□□□□□ -2.04
PTPRC-213ENST00000529828 G3V3Q6 166 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms