RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 SCGB1D1O95968 90 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 PPP1R17O96001 155 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 MUC21Q5SSG8 566 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 AMTNQ6UX39 209 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 Q6ZWC4 215 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 DEFB125Q8N687 156 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 PRSS3P2Q8NHM4 247 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 RNF185Q96GF1 192 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 URB1-AS1Q96HZ7 61 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 MSRB1Q9NZV6 116 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 HSPB8Q9UJY1 196 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 SELENOKQ9Y6D0 94 aa4.22□□□□□ -1.73
LINC01001-202ENST00000527683 MUC4Q99102 2169 aa4.21□□□□□ -1.73
LINC01001-202ENST00000527683 MUC21A0A0G2JKD1 596 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 MUC21A0A140T8X8 626 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 C20orf202A1L168 122 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 LINC01546A6NGU7 62 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 PRSS47A8MTI9 375 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 OR11H12B2RN74 326 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 K7EMI3 77 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 LEPROTL1O95214 131 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 INSP01308 110 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 CD7P09564 240 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 RNASE3P12724 160 aaKnown RBP4.21□□□□□ -1.74
LINC01001-202ENST00000527683 KRTDAPP60985 99 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 PKIAP61925 76 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 PMCHL1Q16048 86 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 SPINK13Q1W4C9 94 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 TEX43Q6ZNM6 134 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 C9orf85Q96MD7 179 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 LINC00467Q9BRT7 94 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 RETNQ9HD89 108 aa4.21□□□□□ -1.74
LINC01001-202ENST00000527683 TRAV12-2A0A075B6T6 113 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 IGHV3-16A0A0C4DH30 117 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 RBMY1BA6NDE4 496 aaKnown RBP4.2□□□□□ -1.74
LINC01001-202ENST00000527683 RBMY1EA6NEQ0 496 aaKnown RBP4.2□□□□□ -1.74
LINC01001-202ENST00000527683 KNCNA6PVL3 124 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 CRXO43186 299 aaPredicted RBP4.2□□□□□ -1.74
LINC01001-202ENST00000527683 TNFRSF6BO95407 300 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 NCR2O95944 276 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 NPYP01303 97 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 IGKV3-20P01619 116 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 HBDP02042 147 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 RBMY1DP0C7P1 496 aaKnown RBP4.2□□□□□ -1.74
LINC01001-202ENST00000527683 C3orf79P0CE67 100 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 SMIM17P0DL12 118 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 EVI2AP22794 236 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 NUTF2P61970 127 aaKnown RBP4.2□□□□□ -1.74
LINC01001-202ENST00000527683 ZNF415Q09FC8 603 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 ODF3L2Q3SX64 289 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 PIK3CD-AS1Q5SR53 167 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 Q6ZQT7 251 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 STHQ8IWL8 128 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 FAM19A2Q8N3H0 131 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 POM121L12Q8N7R1 296 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 C2orf88Q9BSF0 95 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 NDUFAF3Q9BU61 184 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 TMEM70Q9BUB7 260 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 MAP1LC3CQ9BXW4 147 aa4.2□□□□□ -1.74
LINC01001-202ENST00000527683 KIR2DL5BA0A0G2JN68 375 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 KIR2DL5BA0A0G2JPC4 375 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 CBY3A6NI87 242 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 LINC01549A6NIU2 74 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 GNRH2O43555 120 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 IFI27P40305 119 aaPredicted RBP4.19□□□□□ -1.74
LINC01001-202ENST00000527683 PET117Q6UWS5 81 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 TRPT1Q86TN4 253 aaKnown RBP4.19□□□□□ -1.74
LINC01001-202ENST00000527683 KIR2DL5AQ8N109 375 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 Q8N8P6 123 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 SVIPQ8NHG7 77 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 PTH2Q96A98 100 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 C14orf144Q96I85 54 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 C20orf78Q9BR46 151 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 VAMP8Q9BV40 100 aa4.19□□□□□ -1.74
LINC01001-202ENST00000527683 TIMM8BQ9Y5J9 83 aaPredicted RBP4.19□□□□□ -1.74
LINC01001-202ENST00000527683 LOC389332A0A1B0GUA5 103 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 SMKR1H3BMG3 65 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 SYS1-DBNDD2H3BUS1 97 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 LY6G6CO95867 125 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 MGPP08493 103 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 G0S2P27469 103 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 DDTP30046 118 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 RPL32P62910 135 aaKnown RBP4.18□□□□□ -1.74
LINC01001-202ENST00000527683 MORN3Q6PF18 240 aaPredicted RBP4.18□□□□□ -1.74
LINC01001-202ENST00000527683 SPATA12Q7Z6I5 190 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 GTSCR1Q86UQ5 136 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 C14orf178Q8N769 122 aaPredicted RBP4.18□□□□□ -1.74
LINC01001-202ENST00000527683 NRACQ8N912 160 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 Q8N976 141 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 SPXQ9BT56 116 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 SMIM2Q9BVW6 85 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 C1QTNF4Q9BXJ3 329 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 KIF25-AS1Q9Y6Z4 181 aa4.18□□□□□ -1.74
LINC01001-202ENST00000527683 NACAE9PAV3 2078 aa4.17□□□□□ -1.74
LINC01001-202ENST00000527683 HYDINQ4G0P3 5121 aa4.17□□□□□ -1.74
LINC01001-202ENST00000527683 DNAH7Q8WXX0 4024 aa4.17□□□□□ -1.74
LINC01001-202ENST00000527683 IGLV2-18A0A075B6J9 118 aa4.17□□□□□ -1.74
LINC01001-202ENST00000527683 A0A087WWL8 130 aa4.17□□□□□ -1.74
LINC01001-202ENST00000527683 A0A096LNJ9 63 aa4.17□□□□□ -1.74
LINC01001-202ENST00000527683 A8MWV9 139 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms