RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 CXorf1O96002 111 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 P01737 135 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 MBP02144 154 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 GIPP09681 153 aaPredicted RBP10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 CRIP1P50238 77 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 RAB4BP61018 213 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 COX6A2Q02221 97 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 REG3AQ06141 175 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 TMEM97Q5BJF2 176 aa10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 PSMG3Q9BT73 122 aaPredicted RBP10.03□□□□□ -0.8
CHMP4A-203ENST00000527154 NDUFS6O75380 124 aaKnown RBP10.02□□□□□ -0.81
CHMP4A-203ENST00000527154 ATP6V0CP27449 155 aa10.02□□□□□ -0.81
CHMP4A-203ENST00000527154 PRSS3P2Q8NHM4 247 aa10.02□□□□□ -0.81
CHMP4A-203ENST00000527154 ACTR3CQ9C0K3 210 aaPredicted RBP10.02□□□□□ -0.81
CHMP4A-203ENST00000527154 ARL2-SNX15V9GYD0 113 aa10.02□□□□□ -0.81
CHMP4A-203ENST00000527154 SERF2P84101 59 aa10.01□□□□□ -0.81
CHMP4A-203ENST00000527154 IQCJQ1A5X6 159 aa10.01□□□□□ -0.81
CHMP4A-203ENST00000527154 C20orf203Q8NBC4 194 aa10.01□□□□□ -0.81
CHMP4A-203ENST00000527154 A0A1W2PRE2 83 aa10□□□□□ -0.81
CHMP4A-203ENST00000527154 IFNA7P01567 189 aa10□□□□□ -0.81
CHMP4A-203ENST00000527154 MAJINQ3KP22 176 aa10□□□□□ -0.81
CHMP4A-203ENST00000527154 ZFP82Q8N141 532 aa10□□□□□ -0.81
CHMP4A-203ENST00000527154 STPG4Q8N801 248 aa10□□□□□ -0.81
CHMP4A-203ENST00000527154 C15orf56Q8N910 161 aa10□□□□□ -0.81
CHMP4A-203ENST00000527154 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
CHMP4A-203ENST00000527154 M0R036 132 aa9.99□□□□□ -0.81
CHMP4A-203ENST00000527154 M0R381 172 aa9.99□□□□□ -0.81
CHMP4A-203ENST00000527154 TNFSF18Q9UNG2 199 aa9.99□□□□□ -0.81
CHMP4A-203ENST00000527154 TRBV6-1A0A0K0K1D8 114 aa9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 A0A1B0GUV1 79 aa9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 GRIFINA4D1Z8 144 aa9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 PEX7O00628 323 aa9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 RPS10P46783 165 aaKnown RBP9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 Q6ZRP5 223 aa9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 Q86TA4 180 aa9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 AQP10Q96PS8 301 aa9.98□□□□□ -0.81
CHMP4A-203ENST00000527154 TRBV25-1A0A075B6N4 114 aa9.97□□□□□ -0.81
CHMP4A-203ENST00000527154 TPT1P13693 172 aaKnown RBP9.97□□□□□ -0.81
CHMP4A-203ENST00000527154 UBE2G2P60604 165 aa9.97□□□□□ -0.81
CHMP4A-203ENST00000527154 GAGE6Q13070 117 aa9.97□□□□□ -0.81
CHMP4A-203ENST00000527154 GFRA4Q9GZZ7 299 aa9.97□□□□□ -0.81
CHMP4A-203ENST00000527154 A0A096LNI7 61 aa9.96□□□□□ -0.82
CHMP4A-203ENST00000527154 IGKV2-24A0A0C4DH68 120 aa9.96□□□□□ -0.82
CHMP4A-203ENST00000527154 H7C1H1 209 aa9.96□□□□□ -0.82
CHMP4A-203ENST00000527154 SH2D1AO60880 128 aa9.96□□□□□ -0.82
CHMP4A-203ENST00000527154 INO80EQ8NBZ0 244 aaPredicted RBP9.96□□□□□ -0.82
CHMP4A-203ENST00000527154 TMSB15BA0A087X1C1 80 aa9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 FAM231BA6NCW3 169 aa9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 ZNF726P1Q15940 193 aa9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 ZNF674Q2M3X9 581 aa9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 FAM162BQ5T6X4 162 aa9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 LYPD6BQ8NI32 183 aa9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 HIST1H2BAQ96A08 127 aa9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
CHMP4A-203ENST00000527154 IGLV4-60A0A075B6I1 120 aa9.94□□□□□ -0.82
CHMP4A-203ENST00000527154 CTXND1A0A1B0GTU2 59 aa9.94□□□□□ -0.82
CHMP4A-203ENST00000527154 FAM74A7A6NL05 159 aa9.94□□□□□ -0.82
CHMP4A-203ENST00000527154 NKX6-2Q9C056 277 aaPredicted RBP9.94□□□□□ -0.82
CHMP4A-203ENST00000527154 LINC00474Q9P2X8 69 aa9.94□□□□□ -0.82
CHMP4A-203ENST00000527154 PSORS1C2Q9UIG4 136 aa9.94□□□□□ -0.82
CHMP4A-203ENST00000527154 ZFP30Q9Y2G7 519 aa9.94□□□□□ -0.82
CHMP4A-203ENST00000527154 RPL7L1Q6DKI1 246 aaKnown RBP9.93□□□□□ -0.82
CHMP4A-203ENST00000527154 ZNF664Q8N3J9 261 aa9.93□□□□□ -0.82
CHMP4A-203ENST00000527154 GVQW2A0A096LPI5 108 aaPredicted RBP9.92□□□□□ -0.82
CHMP4A-203ENST00000527154 IGHV1-24A0A0C4DH33 117 aa9.92□□□□□ -0.82
CHMP4A-203ENST00000527154 UBE2G1P62253 170 aa9.92□□□□□ -0.82
CHMP4A-203ENST00000527154 ZNF56Q15929 161 aa9.92□□□□□ -0.82
CHMP4A-203ENST00000527154 FMC1Q96HJ9 113 aa9.92□□□□□ -0.82
CHMP4A-203ENST00000527154 FXYD6-FXYD2A0A087WZ82 144 aa9.91□□□□□ -0.82
CHMP4A-203ENST00000527154 BORCS7-ASMTA0A0B4J1R7 106 aa9.91□□□□□ -0.82
CHMP4A-203ENST00000527154 Q5BKY6 102 aa9.91□□□□□ -0.82
CHMP4A-203ENST00000527154 CFAP161Q6P656 301 aa9.91□□□□□ -0.82
CHMP4A-203ENST00000527154 SSBP4Q9BWG4 385 aaPredicted RBP9.91□□□□□ -0.82
CHMP4A-203ENST00000527154 SNAI2O43623 268 aa9.9□□□□□ -0.82
CHMP4A-203ENST00000527154 CXCL1P09341 107 aa9.9□□□□□ -0.82
CHMP4A-203ENST00000527154 AKR1C8PQ5T2L2 129 aa9.9□□□□□ -0.82
CHMP4A-203ENST00000527154 OR10AG1Q8NH19 301 aa9.9□□□□□ -0.82
CHMP4A-203ENST00000527154 LTAP01374 205 aa9.88□□□□□ -0.83
CHMP4A-203ENST00000527154 RAB5CP51148 216 aa9.88□□□□□ -0.83
CHMP4A-203ENST00000527154 MAP1LC3B2A6NCE7 125 aa9.87□□□□□ -0.83
CHMP4A-203ENST00000527154 G3V3Q6 166 aa9.87□□□□□ -0.83
CHMP4A-203ENST00000527154 AKR1C3P42330 323 aa9.87□□□□□ -0.83
CHMP4A-203ENST00000527154 ZNF345Q14585 488 aa9.87□□□□□ -0.83
CHMP4A-203ENST00000527154 HIGD2BQ4VC39 106 aa9.87□□□□□ -0.83
CHMP4A-203ENST00000527154 CST9LP1Q5W188 147 aa9.87□□□□□ -0.83
CHMP4A-203ENST00000527154 MAP1LC3BQ9GZQ8 125 aa9.87□□□□□ -0.83
CHMP4A-203ENST00000527154 MUC17Q685J3 4493 aa9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 GAGE12HA6NDE8 117 aa9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 HMSDA8MTL9 139 aa9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 M0QY20 66 aa9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 OR5AL1P0C617 328 aa9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 PRR26Q8N8Z3 221 aa9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 TCEAL7Q9BRU2 100 aa9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 ZNF471Q9BX82 626 aaPredicted RBP9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 PKIGQ9Y2B9 76 aa9.86□□□□□ -0.83
CHMP4A-203ENST00000527154 ARPC5O15511 151 aa9.85□□□□□ -0.83
CHMP4A-203ENST00000527154 FHITP49789 147 aa9.85□□□□□ -0.83
CHMP4A-203ENST00000527154 STOML3Q8TAV4 291 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms